EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000008473 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 22363 bases
Position: chrscaffold_14:40859047-40881409
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000026078	La	PF05383.17	3.5e-22	1	1
ENSLAFP00000007114	La	PF05383.17	3.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000030294	-	1014	-	ENSLAFP00000026078	337 (aa)	-	G3UE20
ENSLAFT00000008474	-	1005	-	ENSLAFP00000007114	335 (aa)	-	G3T1W4

Gene Model

Click here to download ENSLAFG00000008473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000008473's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000008473	-	99	92.169	ENSG00000138709	LARP1B	99	91.667	Homo_sapiens
ENSLAFG00000008473	-	99	94.345	ENSAMEG00000002748	LARP1B	99	94.345	Ailuropoda_melanoleuca
ENSLAFG00000008473	-	99	79.880	ENSANAG00000034618	LARP1B	96	80.303	Aotus_nancymaae
ENSLAFG00000008473	-	98	92.424	ENSBTAG00000012135	LARP1B	63	92.424	Bos_taurus
ENSLAFG00000008473	-	99	93.155	ENSCJAG00000003338	LARP1B	99	93.155	Callithrix_jacchus
ENSLAFG00000008473	-	99	93.750	ENSCAFG00020018899	LARP1B	99	93.750	Canis_lupus_dingo
ENSLAFG00000008473	-	99	90.801	ENSCHIG00000023144	LARP1B	99	90.801	Capra_hircus
ENSLAFG00000008473	-	99	86.667	ENSTSYG00000002037	-	93	86.667	Carlito_syrichta
ENSLAFG00000008473	-	76	94.595	ENSCPOG00000034668	-	93	94.595	Cavia_porcellus
ENSLAFG00000008473	-	100	93.175	ENSCCAG00000021948	LARP1B	100	93.175	Cebus_capucinus
ENSLAFG00000008473	-	99	88.690	ENSCATG00000013541	LARP1B	99	88.690	Cercocebus_atys
ENSLAFG00000008473	-	99	87.126	ENSCLAG00000006448	-	99	87.202	Chinchilla_lanigera
ENSLAFG00000008473	-	99	79.819	ENSCANG00000026958	LARP1B	99	79.464	Colobus_angolensis_palliatus
ENSLAFG00000008473	-	99	92.262	ENSCGRG00001004660	-	99	92.262	Cricetulus_griseus_chok1gshd
ENSLAFG00000008473	-	99	91.964	ENSCGRG00000001914	-	99	91.964	Cricetulus_griseus_crigri
ENSLAFG00000008473	-	98	93.313	ENSDNOG00000018765	-	64	93.313	Dasypus_novemcinctus
ENSLAFG00000008473	-	100	94.659	ENSEASG00005018106	LARP1B	100	94.659	Equus_asinus_asinus
ENSLAFG00000008473	-	99	92.857	ENSFCAG00000014650	-	99	92.857	Felis_catus
ENSLAFG00000008473	-	99	92.169	ENSGGOG00000015900	LARP1B	99	91.667	Gorilla_gorilla
ENSLAFG00000008473	-	98	75.988	ENSHGLG00000013922	-	96	74.772	Heterocephalus_glaber_female
ENSLAFG00000008473	-	99	86.686	ENSHGLG00000006728	-	99	86.982	Heterocephalus_glaber_female
ENSLAFG00000008473	-	99	88.182	ENSHGLG00100014041	-	96	87.365	Heterocephalus_glaber_male
ENSLAFG00000008473	-	98	75.988	ENSHGLG00100016491	-	96	74.772	Heterocephalus_glaber_male
ENSLAFG00000008473	-	99	80.363	ENSSTOG00000021917	-	94	81.381	Ictidomys_tridecemlineatus
ENSLAFG00000008473	-	91	68.078	ENSSTOG00000033183	-	91	73.282	Ictidomys_tridecemlineatus
ENSLAFG00000008473	-	99	89.911	ENSSTOG00000008596	-	99	89.911	Ictidomys_tridecemlineatus
ENSLAFG00000008473	-	96	74.534	ENSSTOG00000034510	-	87	74.534	Ictidomys_tridecemlineatus
ENSLAFG00000008473	-	99	88.955	ENSJJAG00000022360	Larp1b	99	88.955	Jaculus_jaculus
ENSLAFG00000008473	-	98	72.205	ENSLACG00000015247	LARP1B	85	70.181	Latimeria_chalumnae
ENSLAFG00000008473	-	99	92.771	ENSMFAG00000002218	LARP1B	99	92.262	Macaca_fascicularis
ENSLAFG00000008473	-	69	88.889	ENSMFAG00000003306	-	92	88.889	Macaca_fascicularis
ENSLAFG00000008473	-	99	92.262	ENSMMUG00000021347	LARP1B	99	92.262	Macaca_mulatta
ENSLAFG00000008473	-	64	89.437	ENSMNEG00000027747	-	89	89.437	Macaca_nemestrina
ENSLAFG00000008473	-	77	56.618	ENSMZEG00005002545	larp1b	54	56.618	Maylandia_zebra
ENSLAFG00000008473	-	99	91.369	ENSMAUG00000007879	-	99	91.369	Mesocricetus_auratus
ENSLAFG00000008473	-	97	70.245	ENSMICG00000028052	-	63	70.245	Microcebus_murinus
ENSLAFG00000008473	-	99	95.238	ENSMICG00000036111	LARP1B	99	95.238	Microcebus_murinus
ENSLAFG00000008473	-	99	79.819	ENSMICG00000037883	-	90	79.819	Microcebus_murinus
ENSLAFG00000008473	-	78	93.561	ENSMOCG00000001490	Larp1b	95	93.561	Microtus_ochrogaster
ENSLAFG00000008473	-	99	90.476	MGP_CAROLIEiJ_G0024962	Larp1b	99	90.476	Mus_caroli
ENSLAFG00000008473	-	99	91.667	ENSMUSG00000025762	Larp1b	99	91.667	Mus_musculus
ENSLAFG00000008473	-	99	91.369	MGP_PahariEiJ_G0026403	Larp1b	99	91.369	Mus_pahari
ENSLAFG00000008473	-	99	91.667	MGP_SPRETEiJ_G0025897	Larp1b	99	91.667	Mus_spretus
ENSLAFG00000008473	-	99	91.369	ENSNLEG00000013819	LARP1B	99	91.369	Nomascus_leucogenys
ENSLAFG00000008473	-	99	86.228	ENSODEG00000001292	-	99	86.310	Octodon_degus
ENSLAFG00000008473	-	99	91.867	ENSPPAG00000030439	LARP1B	99	91.369	Pan_paniscus
ENSLAFG00000008473	-	99	92.857	ENSPPRG00000002743	-	99	92.857	Panthera_pardus
ENSLAFG00000008473	-	99	92.857	ENSPTIG00000011225	LARP1B	99	92.857	Panthera_tigris_altaica
ENSLAFG00000008473	-	99	91.566	ENSPTRG00000016437	LARP1B	99	91.071	Pan_troglodytes
ENSLAFG00000008473	-	99	92.470	ENSPANG00000012488	LARP1B	99	91.964	Papio_anubis
ENSLAFG00000008473	-	99	87.613	ENSPCIG00000026516	LARP1B	87	87.613	Phascolarctos_cinereus
ENSLAFG00000008473	-	99	51.771	ENSPFOG00000022837	-	52	51.226	Poecilia_formosa
ENSLAFG00000008473	-	80	56.537	ENSPREG00000005955	-	89	56.184	Poecilia_reticulata
ENSLAFG00000008473	-	99	95.152	ENSPCOG00000021874	LARP1B	99	94.643	Propithecus_coquereli
ENSLAFG00000008473	-	99	93.155	ENSRNOG00000038366	Larp1b	99	93.155	Rattus_norvegicus
ENSLAFG00000008473	-	99	82.440	ENSRBIG00000038568	-	91	82.440	Rhinopithecus_bieti
ENSLAFG00000008473	-	99	89.583	ENSRBIG00000039982	-	99	88.988	Rhinopithecus_bieti
ENSLAFG00000008473	-	99	73.512	ENSRROG00000038525	-	96	73.512	Rhinopithecus_roxellana
ENSLAFG00000008473	-	99	92.771	ENSRROG00000030771	LARP1B	99	92.262	Rhinopithecus_roxellana
ENSLAFG00000008473	-	64	62.673	ENSSSCG00000040491	-	97	72.414	Sus_scrofa
ENSLAFG00000008473	-	98	92.705	ENSSSCG00000034280	LARP1B	63	92.705	Sus_scrofa
ENSLAFG00000008473	-	99	83.636	ENSUAMG00000016938	-	91	95.882	Ursus_americanus
ENSLAFG00000008473	-	98	94.529	ENSVVUG00000011307	LARP1B	65	94.529	Vulpes_vulpes