EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000008614 (Gene tree)
Gene ID: -
Gene Symbol: LRPPRC
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 117463 bases
Position: chrscaffold_40:18684692-18802154
Accession: 15714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000007240	PPR	PF01535.20	2e-31	1	5
ENSLAFP00000007240	PPR	PF01535.20	2e-31	2	5
ENSLAFP00000007240	PPR	PF01535.20	2e-31	3	5
ENSLAFP00000007240	PPR	PF01535.20	2e-31	4	5
ENSLAFP00000007240	PPR	PF01535.20	2e-31	5	5
ENSLAFP00000019681	PPR	PF01535.20	3.6e-31	1	5
ENSLAFP00000019681	PPR	PF01535.20	3.6e-31	2	5
ENSLAFP00000019681	PPR	PF01535.20	3.6e-31	3	5
ENSLAFP00000019681	PPR	PF01535.20	3.6e-31	4	5
ENSLAFP00000019681	PPR	PF01535.20	3.6e-31	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000026130	LRPPRC-201	4206	-	ENSLAFP00000019681	1401 (aa)	-	G3TVS3
ENSLAFT00000008620	LRPPRC-202	4194	-	ENSLAFP00000007240	1397 (aa)	-	G3T270

Gene Model

Click here to download ENSLAFG00000008614's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000008614's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000008614	LRPPRC	99	49.161	ENSAPOG00000016610	lrpprc	99	49.055	Acanthochromis_polyacanthus
ENSLAFG00000008614	LRPPRC	98	77.266	ENSAMEG00000005852	LRPPRC	100	77.266	Ailuropoda_melanoleuca
ENSLAFG00000008614	LRPPRC	99	47.001	ENSACIG00000009604	lrpprc	99	47.001	Amphilophus_citrinellus
ENSLAFG00000008614	LRPPRC	99	49.128	ENSAOCG00000005886	lrpprc	99	49.128	Amphiprion_ocellaris
ENSLAFG00000008614	LRPPRC	99	47.509	ENSAPEG00000002937	lrpprc	98	47.398	Amphiprion_percula
ENSLAFG00000008614	LRPPRC	86	60.417	ENSATEG00000010555	lrpprc	93	60.417	Anabas_testudineus
ENSLAFG00000008614	LRPPRC	99	57.559	ENSACAG00000029278	LRPPRC	99	57.436	Anolis_carolinensis
ENSLAFG00000008614	LRPPRC	99	74.786	ENSANAG00000027440	LRPPRC	99	76.604	Aotus_nancymaae
ENSLAFG00000008614	LRPPRC	95	48.401	ENSACLG00000023712	lrpprc	92	56.540	Astatotilapia_calliptera
ENSLAFG00000008614	LRPPRC	99	73.571	ENSCJAG00000000794	LRPPRC	99	75.283	Callithrix_jacchus
ENSLAFG00000008614	LRPPRC	100	76.681	ENSCHIG00000020173	LRPPRC	100	76.681	Capra_hircus
ENSLAFG00000008614	LRPPRC	96	58.327	ENSCAPG00000013631	LRPPRC	99	54.261	Cavia_aperea
ENSLAFG00000008614	LRPPRC	86	74.586	ENSCPOG00000000204	LRPPRC	99	74.586	Cavia_porcellus
ENSLAFG00000008614	LRPPRC	99	74.302	ENSCCAG00000031900	LRPPRC	99	75.472	Cebus_capucinus
ENSLAFG00000008614	LRPPRC	99	74.500	ENSCATG00000014187	LRPPRC	99	77.925	Cercocebus_atys
ENSLAFG00000008614	LRPPRC	100	73.110	ENSCLAG00000005203	LRPPRC	100	73.110	Chinchilla_lanigera
ENSLAFG00000008614	LRPPRC	99	74.929	ENSCSAG00000013233	LRPPRC	99	74.929	Chlorocebus_sabaeus
ENSLAFG00000008614	LRPPRC	85	78.808	ENSCHOG00000003631	LRPPRC	84	78.808	Choloepus_hoffmanni
ENSLAFG00000008614	LRPPRC	99	72.048	ENSCANG00000034961	LRPPRC	99	81.532	Colobus_angolensis_palliatus
ENSLAFG00000008614	LRPPRC	99	71.582	ENSCGRG00001016261	Lrpprc	99	71.582	Cricetulus_griseus_chok1gshd
ENSLAFG00000008614	LRPPRC	99	71.582	ENSCGRG00000004072	Lrpprc	99	71.582	Cricetulus_griseus_crigri
ENSLAFG00000008614	LRPPRC	99	40.209	ENSCSEG00000003850	lrpprc	96	48.024	Cynoglossus_semilaevis
ENSLAFG00000008614	LRPPRC	99	49.443	ENSCVAG00000012967	lrpprc	99	49.372	Cyprinodon_variegatus
ENSLAFG00000008614	LRPPRC	99	47.658	ENSDARG00000043970	lrpprc	98	47.423	Danio_rerio
ENSLAFG00000008614	LRPPRC	99	74.875	ENSDNOG00000012594	-	99	74.875	Dasypus_novemcinctus
ENSLAFG00000008614	LRPPRC	82	57.280	ENSDNOG00000032336	-	100	57.280	Dasypus_novemcinctus
ENSLAFG00000008614	LRPPRC	99	74.212	ENSDORG00000012233	Lrpprc	99	74.212	Dipodomys_ordii
ENSLAFG00000008614	LRPPRC	100	75.411	ENSETEG00000006657	LRPPRC	100	75.340	Echinops_telfairi
ENSLAFG00000008614	LRPPRC	87	67.470	ENSEEUG00000012340	LRPPRC	93	67.470	Erinaceus_europaeus
ENSLAFG00000008614	LRPPRC	97	48.018	ENSELUG00000012803	lrpprc	98	48.253	Esox_lucius
ENSLAFG00000008614	LRPPRC	100	78.970	ENSFCAG00000013468	LRPPRC	100	78.970	Felis_catus
ENSLAFG00000008614	LRPPRC	96	55.357	ENSFALG00000012738	LRPPRC	99	55.357	Ficedula_albicollis
ENSLAFG00000008614	LRPPRC	99	71.989	ENSFDAG00000015328	LRPPRC	99	71.989	Fukomys_damarensis
ENSLAFG00000008614	LRPPRC	99	49.055	ENSFHEG00000019604	lrpprc	99	49.022	Fundulus_heteroclitus
ENSLAFG00000008614	LRPPRC	99	46.752	ENSGMOG00000008337	lrpprc	99	46.752	Gadus_morhua
ENSLAFG00000008614	LRPPRC	99	48.987	ENSGAFG00000001455	lrpprc	99	48.953	Gambusia_affinis
ENSLAFG00000008614	LRPPRC	99	48.369	ENSGACG00000010679	lrpprc	99	48.820	Gasterosteus_aculeatus
ENSLAFG00000008614	LRPPRC	99	49.372	ENSHBUG00000000393	lrpprc	97	49.372	Haplochromis_burtoni
ENSLAFG00000008614	LRPPRC	99	72.896	ENSHGLG00000006123	LRPPRC	99	73.039	Heterocephalus_glaber_female
ENSLAFG00000008614	LRPPRC	60	71.990	ENSHGLG00100005960	-	99	72.216	Heterocephalus_glaber_male
ENSLAFG00000008614	LRPPRC	98	47.969	ENSHCOG00000002107	lrpprc	100	47.897	Hippocampus_comes
ENSLAFG00000008614	LRPPRC	99	50.139	ENSIPUG00000009406	lrpprc	98	50.139	Ictalurus_punctatus
ENSLAFG00000008614	LRPPRC	99	76.538	ENSSTOG00000011185	LRPPRC	99	76.538	Ictidomys_tridecemlineatus
ENSLAFG00000008614	LRPPRC	99	74.982	ENSJJAG00000020475	Lrpprc	99	74.982	Jaculus_jaculus
ENSLAFG00000008614	LRPPRC	96	46.686	ENSKMAG00000003287	lrpprc	82	46.686	Kryptolebias_marmoratus
ENSLAFG00000008614	LRPPRC	97	48.541	ENSLBEG00000023225	lrpprc	96	55.138	Labrus_bergylta
ENSLAFG00000008614	LRPPRC	99	56.885	ENSLACG00000014030	LRPPRC	99	56.924	Latimeria_chalumnae
ENSLAFG00000008614	LRPPRC	99	54.539	ENSLOCG00000016390	lrpprc	91	56.467	Lepisosteus_oculatus
ENSLAFG00000008614	LRPPRC	99	74.357	ENSMFAG00000041560	LRPPRC	99	81.532	Macaca_fascicularis
ENSLAFG00000008614	LRPPRC	99	73.319	ENSMMUG00000019841	LRPPRC	99	81.081	Macaca_mulatta
ENSLAFG00000008614	LRPPRC	99	74.429	ENSMNEG00000031613	LRPPRC	99	78.113	Macaca_nemestrina
ENSLAFG00000008614	LRPPRC	98	46.032	ENSMAMG00000021835	lrpprc	98	46.230	Mastacembelus_armatus
ENSLAFG00000008614	LRPPRC	99	49.441	ENSMZEG00005027379	lrpprc	99	49.441	Maylandia_zebra
ENSLAFG00000008614	LRPPRC	99	72.226	ENSMAUG00000012118	Lrpprc	99	72.226	Mesocricetus_auratus
ENSLAFG00000008614	LRPPRC	100	76.769	ENSMICG00000010486	LRPPRC	99	80.377	Microcebus_murinus
ENSLAFG00000008614	LRPPRC	99	73.372	ENSMOCG00000006048	Lrpprc	99	73.372	Microtus_ochrogaster
ENSLAFG00000008614	LRPPRC	95	55.403	ENSMMOG00000007830	lrpprc	99	55.403	Mola_mola
ENSLAFG00000008614	LRPPRC	96	65.926	ENSMODG00000000648	LRPPRC	99	65.926	Monodelphis_domestica
ENSLAFG00000008614	LRPPRC	99	47.683	ENSMALG00000001271	lrpprc	99	47.826	Monopterus_albus
ENSLAFG00000008614	LRPPRC	100	75.429	ENSMPUG00000011800	LRPPRC	99	76.949	Mustela_putorius_furo
ENSLAFG00000008614	LRPPRC	100	77.110	ENSMLUG00000010575	LRPPRC	100	77.110	Myotis_lucifugus
ENSLAFG00000008614	LRPPRC	99	72.656	ENSNGAG00000013069	Lrpprc	99	72.656	Nannospalax_galili
ENSLAFG00000008614	LRPPRC	90	56.471	ENSNBRG00000013202	lrpprc	99	56.471	Neolamprologus_brichardi
ENSLAFG00000008614	LRPPRC	99	73.424	ENSNLEG00000016782	LRPPRC	99	77.925	Nomascus_leucogenys
ENSLAFG00000008614	LRPPRC	93	69.263	ENSOPRG00000016774	LRPPRC	93	69.329	Ochotona_princeps
ENSLAFG00000008614	LRPPRC	99	73.801	ENSODEG00000011211	LRPPRC	99	73.801	Octodon_degus
ENSLAFG00000008614	LRPPRC	99	49.267	ENSONIG00000000917	lrpprc	99	48.810	Oreochromis_niloticus
ENSLAFG00000008614	LRPPRC	53	58.520	ENSOANG00000014670	-	99	58.870	Ornithorhynchus_anatinus
ENSLAFG00000008614	LRPPRC	100	77.325	ENSOCUG00000015046	LRPPRC	96	77.325	Oryctolagus_cuniculus
ENSLAFG00000008614	LRPPRC	99	46.408	ENSORLG00000004605	lrpprc	98	45.549	Oryzias_latipes
ENSLAFG00000008614	LRPPRC	92	48.692	ENSORLG00020012536	lrpprc	99	48.290	Oryzias_latipes_hni
ENSLAFG00000008614	LRPPRC	94	52.976	ENSORLG00015018270	lrpprc	99	53.175	Oryzias_latipes_hsok
ENSLAFG00000008614	LRPPRC	99	73.907	ENSOGAG00000012798	LRPPRC	99	73.835	Otolemur_garnettii
ENSLAFG00000008614	LRPPRC	100	76.857	ENSOARG00000006522	LRPPRC	100	76.857	Ovis_aries
ENSLAFG00000008614	LRPPRC	99	72.753	ENSPPAG00000040876	LRPPRC	99	78.195	Pan_paniscus
ENSLAFG00000008614	LRPPRC	100	78.612	ENSPPRG00000006578	LRPPRC	100	78.612	Panthera_pardus
ENSLAFG00000008614	LRPPRC	97	78.761	ENSPTIG00000000933	LRPPRC	96	78.842	Panthera_tigris_altaica
ENSLAFG00000008614	LRPPRC	99	74.857	ENSPTRG00000011880	LRPPRC	99	79.245	Pan_troglodytes
ENSLAFG00000008614	LRPPRC	99	74.643	ENSPANG00000020731	LRPPRC	99	78.113	Papio_anubis
ENSLAFG00000008614	LRPPRC	96	57.271	ENSPKIG00000022232	lrpprc	98	57.271	Paramormyrops_kingsleyae
ENSLAFG00000008614	LRPPRC	61	58.721	ENSPSIG00000006830	-	98	58.721	Pelodiscus_sinensis
ENSLAFG00000008614	LRPPRC	59	46.882	ENSPMGG00000016597	lrpprc	91	46.882	Periophthalmus_magnuspinnatus
ENSLAFG00000008614	LRPPRC	94	43.063	ENSPMAG00000002147	lrpprc	99	43.063	Petromyzon_marinus
ENSLAFG00000008614	LRPPRC	99	49.160	ENSPFOG00000011227	lrpprc	99	49.469	Poecilia_formosa
ENSLAFG00000008614	LRPPRC	99	49.090	ENSPLAG00000004018	lrpprc	99	48.950	Poecilia_latipinna
ENSLAFG00000008614	LRPPRC	99	49.370	ENSPMEG00000016425	lrpprc	99	49.230	Poecilia_mexicana
ENSLAFG00000008614	LRPPRC	99	49.365	ENSPREG00000003662	lrpprc	99	49.267	Poecilia_reticulata
ENSLAFG00000008614	LRPPRC	57	72.784	ENSPPYG00000029532	-	99	72.784	Pongo_abelii
ENSLAFG00000008614	LRPPRC	83	76.789	ENSPCAG00000001430	LRPPRC	84	76.789	Procavia_capensis
ENSLAFG00000008614	LRPPRC	100	74.750	ENSPVAG00000002007	LRPPRC	100	74.750	Pteropus_vampyrus
ENSLAFG00000008614	LRPPRC	99	47.018	ENSPNYG00000000756	lrpprc	90	56.371	Pundamilia_nyererei
ENSLAFG00000008614	LRPPRC	99	51.225	ENSPNAG00000002895	lrpprc	95	52.343	Pygocentrus_nattereri
ENSLAFG00000008614	LRPPRC	99	73.014	ENSRNOG00000005877	Lrpprc	99	73.014	Rattus_norvegicus
ENSLAFG00000008614	LRPPRC	99	73.153	ENSRBIG00000031552	LRPPRC	99	73.153	Rhinopithecus_bieti
ENSLAFG00000008614	LRPPRC	99	74.517	ENSSBOG00000011807	LRPPRC	99	76.226	Saimiri_boliviensis_boliviensis
ENSLAFG00000008614	LRPPRC	96	64.169	ENSSHAG00000018725	LRPPRC	99	64.169	Sarcophilus_harrisii
ENSLAFG00000008614	LRPPRC	99	48.378	ENSSFOG00015001042	lrpprc	99	48.245	Scleropages_formosus
ENSLAFG00000008614	LRPPRC	99	48.668	ENSSDUG00000019062	lrpprc	99	48.597	Seriola_dumerili
ENSLAFG00000008614	LRPPRC	99	40.098	ENSSLDG00000023028	lrpprc	99	39.958	Seriola_lalandi_dorsalis
ENSLAFG00000008614	LRPPRC	87	66.914	ENSSARG00000000426	LRPPRC	100	66.914	Sorex_araneus
ENSLAFG00000008614	LRPPRC	99	46.191	ENSSPAG00000000162	lrpprc	99	46.175	Stegastes_partitus
ENSLAFG00000008614	LRPPRC	100	77.182	ENSSSCG00000008452	LRPPRC	100	77.182	Sus_scrofa
ENSLAFG00000008614	LRPPRC	94	54.050	ENSTGUG00000003759	LRPPRC	99	54.050	Taeniopygia_guttata
ENSLAFG00000008614	LRPPRC	91	48.624	ENSTRUG00000008409	lrpprc	96	48.545	Takifugu_rubripes
ENSLAFG00000008614	LRPPRC	99	47.713	ENSTNIG00000007470	lrpprc	99	48.605	Tetraodon_nigroviridis
ENSLAFG00000008614	LRPPRC	100	74.893	ENSTTRG00000006403	LRPPRC	100	74.893	Tursiops_truncatus
ENSLAFG00000008614	LRPPRC	96	72.383	ENSVPAG00000008993	LRPPRC	99	72.383	Vicugna_pacos
ENSLAFG00000008614	LRPPRC	99	56.627	ENSXETG00000009296	lrpprc	99	56.728	Xenopus_tropicalis
ENSLAFG00000008614	LRPPRC	99	46.917	ENSXCOG00000013343	lrpprc	95	51.889	Xiphophorus_couchianus
ENSLAFG00000008614	LRPPRC	99	49.615	ENSXMAG00000018108	lrpprc	95	50.739	Xiphophorus_maculatus