EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLAFG00000008626 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Loxodonta_africana
Status
putative
Strand
Plus strand
Length
23566 bases
Position
chrscaffold_47:11487284-11510849
Accession
100662030
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLAFP00000007249RNA_pol_Rpb1_5PF04998.176e-10111
ENSLAFP00000019477RNA_pol_Rpb1_5PF04998.176.7e-10111
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-27140
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-27240
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-27340
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-27440
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-27540
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-27640
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-27740
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-27840
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-27940
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-271040
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-271140
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-271240
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-271340
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-271440
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-271540
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-271640
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-271740
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-271840
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-271940
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-272040
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-272140
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-272240
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-272340
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-272440
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-272540
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-272640
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-272740
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-272840
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-272940
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-273040
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-273140
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-273240
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-273340
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-273440
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-273540
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-273640
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-273740
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-273840
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-273940
ENSLAFP00000019477RNA_pol_Rpb1_RPF05001.134.4e-274040
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-20129
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-20229
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-20329
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-20429
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-20529
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-20629
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-20729
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-20829
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-20929
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-201029
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-201129
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-201229
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-201329
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-201429
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-201529
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-201629
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-201729
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-201829
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-201929
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-202029
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-202129
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-202229
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-202329
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-202429
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-202529
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-202629
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-202729
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-202829
ENSLAFP00000007249RNA_pol_Rpb1_RPF05001.132.8e-202929
ENSLAFP00000007249RNA_pol_Rpb1_4PF05000.173.6e-3811
ENSLAFP00000019477RNA_pol_Rpb1_4PF05000.173.8e-3811
ENSLAFP00000007249RNA_pol_Rpb1_2PF00623.201.1e-7411
ENSLAFP00000019477RNA_pol_Rpb1_2PF00623.201.2e-7411
ENSLAFP00000007249RNA_pol_Rpb1_3PF04983.188.2e-5011
ENSLAFP00000019477RNA_pol_Rpb1_3PF04983.188.9e-5011
ENSLAFP00000007249RNA_pol_Rpb1_1PF04997.125.3e-10911
ENSLAFP00000019477RNA_pol_Rpb1_1PF04997.125.8e-10911
ENSLAFP00000007249RNA_pol_Rpb1_7PF04990.122e-5411
ENSLAFP00000019477RNA_pol_Rpb1_7PF04990.122.2e-5411
ENSLAFP00000007249RNA_pol_Rpb1_6PF04992.141.4e-6711
ENSLAFP00000019477RNA_pol_Rpb1_6PF04992.141.5e-6711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLAFT00000008630-5661-ENSLAFP000000072491886 (aa)-G3T277
ENSLAFT00000032212-5910XM_023556409ENSLAFP000000194771970 (aa)XP_003416946G3TV69
Gene Model
Click here to download ENSLAFG00000008626's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000008626's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLAFG00000008626-6938.158ENSLAFG00000016719POLR3A9138.158
ENSLAFG00000008626-6233.636ENSLAFG00000014948POLR1A7333.636
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLAFG00000008626-9194.482ENSAPOG00000006552polr2a9194.475Acanthochromis_polyacanthus
ENSLAFG00000008626-10099.645ENSAMEG00000016265-10099.645Ailuropoda_melanoleuca
ENSLAFG00000008626-8691.878ENSACIG00000015982polr2a9389.516Amphilophus_citrinellus
ENSLAFG00000008626-9792.436ENSAOCG00000004255polr2a9692.427Amphiprion_ocellaris
ENSLAFG00000008626-9794.544ENSAPEG00000012623polr2a9991.272Amphiprion_percula
ENSLAFG00000008626-9794.420ENSATEG00000019644polr2a9991.166Anabas_testudineus
ENSLAFG00000008626-10098.376ENSACAG00000014561POLR2A10098.376Anolis_carolinensis
ENSLAFG00000008626-10099.949ENSANAG00000020093-10099.949Aotus_nancymaae
ENSLAFG00000008626-9794.234ENSACLG00000006735polr2a9991.006Astatotilapia_calliptera
ENSLAFG00000008626-9794.792ENSAMXG00000020046polr2a9991.485Astyanax_mexicanus
ENSLAFG00000008626-10099.898ENSBTAG00000046765POLR2A10099.898Bos_taurus
ENSLAFG00000008626-9470.025WBGene00000123ama-19972.727Caenorhabditis_elegans
ENSLAFG00000008626-10099.492ENSCAFG00000016532POLR2A10099.665Canis_familiaris
ENSLAFG00000008626-10098.985ENSCAFG00020007929-10098.985Canis_lupus_dingo
ENSLAFG00000008626-10099.898ENSCHIG00000027173-10099.898Capra_hircus
ENSLAFG00000008626-10097.513ENSTSYG00000012803-10098.020Carlito_syrichta
ENSLAFG00000008626-9895.553ENSCAPG00000001882-10096.927Cavia_aperea
ENSLAFG00000008626-10095.628ENSCPOG00000014812-10096.872Cavia_porcellus
ENSLAFG00000008626-10099.949ENSCCAG00000020938-10099.949Cebus_capucinus
ENSLAFG00000008626-10099.898ENSCATG00000013680-10099.898Cercocebus_atys
ENSLAFG00000008626-10099.797ENSCLAG00000012196-10099.797Chinchilla_lanigera
ENSLAFG00000008626-10086.515ENSCSAG00000011644-10089.465Chlorocebus_sabaeus
ENSLAFG00000008626-10093.909ENSCPBG00000012697POLR2A10093.909Chrysemys_picta_bellii
ENSLAFG00000008626-9976.428ENSCING00000007884-9976.689Ciona_intestinalis
ENSLAFG00000008626-9783.333ENSCSAVG00000008334-9983.871Ciona_savignyi
ENSLAFG00000008626-10099.239ENSCANG00000010622-10099.239Colobus_angolensis_palliatus
ENSLAFG00000008626-10094.310ENSCGRG00001003538Polr2a10094.612Cricetulus_griseus_chok1gshd
ENSLAFG00000008626-9695.440ENSCGRG00000012105Polr2a10091.143Cricetulus_griseus_crigri
ENSLAFG00000008626-9793.800ENSCSEG00000002635polr2a10090.633Cynoglossus_semilaevis
ENSLAFG00000008626-9794.668ENSCVAG00000005156polr2a9991.378Cyprinodon_variegatus
ENSLAFG00000008626-9794.486ENSDARG00000099966polr2a9991.223Danio_rerio
ENSLAFG00000008626-10096.954ENSDNOG00000016482-10096.954Dasypus_novemcinctus
ENSLAFG00000008626-10099.949ENSDORG00000008667Polr2a10099.949Dipodomys_ordii
ENSLAFG00000008626-9969.995FBgn0003277RpII2159974.828Drosophila_melanogaster
ENSLAFG00000008626-9495.641ENSETEG00000002540-8795.641Echinops_telfairi
ENSLAFG00000008626-8587.960ENSEBUG00000013967polr2a9984.455Eptatretus_burgeri
ENSLAFG00000008626-10096.954ENSEASG00005019114-10097.056Equus_asinus_asinus
ENSLAFG00000008626-10099.949ENSECAG00000018485POLR2A10099.949Equus_caballus
ENSLAFG00000008626-8799.800ENSEEUG00000001154-9599.800Erinaceus_europaeus
ENSLAFG00000008626-9390.018ENSELUG00000014284polr2a8490.685Esox_lucius
ENSLAFG00000008626-10099.898ENSFDAG00000008287-10099.898Fukomys_damarensis
ENSLAFG00000008626-9294.668ENSFHEG00000001768polr2a9894.662Fundulus_heteroclitus
ENSLAFG00000008626-9990.361ENSGMOG00000007725polr2a100100.000Gadus_morhua
ENSLAFG00000008626-9994.606ENSGAFG00000005389polr2a9992.427Gambusia_affinis
ENSLAFG00000008626-9990.750ENSGACG00000019366polr2a10091.677Gasterosteus_aculeatus
ENSLAFG00000008626-10098.126ENSGGOG00000014800-10098.126Gorilla_gorilla
ENSLAFG00000008626-9591.569ENSHBUG00000018937polr2a9994.227Haplochromis_burtoni
ENSLAFG00000008626-10099.898ENSHGLG00000012381POLR2A10099.898Heterocephalus_glaber_female
ENSLAFG00000008626-10099.898ENSHGLG00100014843POLR2A10099.898Heterocephalus_glaber_male
ENSLAFG00000008626-9793.924ENSHCOG00000011874polr2a9990.740Hippocampus_comes
ENSLAFG00000008626-9794.172ENSIPUG00000002613Polr2a9990.953Ictalurus_punctatus
ENSLAFG00000008626-10099.949ENSSTOG00000001304-10099.949Ictidomys_tridecemlineatus
ENSLAFG00000008626-10099.848ENSJJAG00000013049Polr2a10099.848Jaculus_jaculus
ENSLAFG00000008626-8485.355ENSKMAG00000016343polr2a8585.418Kryptolebias_marmoratus
ENSLAFG00000008626-9794.172ENSLBEG00000027652polr2a10090.953Labrus_bergylta
ENSLAFG00000008626-9694.805ENSLACG00000012071POLR2A10084.903Latimeria_chalumnae
ENSLAFG00000008626-9194.777ENSLOCG00000013863polr2a9994.472Lepisosteus_oculatus
ENSLAFG00000008626-5298.366ENSMFAG00000007042-9998.366Macaca_fascicularis
ENSLAFG00000008626-10099.898ENSMMUG00000023620-10099.898Macaca_mulatta
ENSLAFG00000008626-10099.191ENSMNEG00000040407-10099.191Macaca_nemestrina
ENSLAFG00000008626-9994.972ENSMLEG00000030263-9998.366Mandrillus_leucophaeus
ENSLAFG00000008626-9794.296ENSMAMG00000003351polr2a9991.059Mastacembelus_armatus
ENSLAFG00000008626-9794.234ENSMZEG00005021429polr2a9991.006Maylandia_zebra
ENSLAFG00000008626-52100.000ENSMAUG00000021055-99100.000Mesocricetus_auratus
ENSLAFG00000008626-10099.848ENSMICG00000013372-10099.848Microcebus_murinus
ENSLAFG00000008626-10093.221ENSMOCG00000018279Polr2a10093.426Microtus_ochrogaster
ENSLAFG00000008626-9193.800ENSMMOG00000012515polr2a9593.793Mola_mola
ENSLAFG00000008626-10099.492ENSMODG00000007009-10099.492Monodelphis_domestica
ENSLAFG00000008626-9594.431ENSMALG00000008716polr2a9992.365Monopterus_albus
ENSLAFG00000008626-10099.898MGP_CAROLIEiJ_G0016587Polr2a10099.898Mus_caroli
ENSLAFG00000008626-10099.898ENSMUSG00000005198Polr2a10099.898Mus_musculus
ENSLAFG00000008626-10098.128MGP_PahariEiJ_G0017718Polr2a10098.128Mus_pahari
ENSLAFG00000008626-10099.898MGP_SPRETEiJ_G0017423Polr2a10099.898Mus_spretus
ENSLAFG00000008626-10099.848ENSMPUG00000009648-10099.848Mustela_putorius_furo
ENSLAFG00000008626-10099.442ENSMLUG00000009088-10099.442Myotis_lucifugus
ENSLAFG00000008626-10099.949ENSNGAG00000002543Polr2a10099.949Nannospalax_galili
ENSLAFG00000008626-8691.631ENSNBRG00000002005polr2a9389.250Neolamprologus_brichardi
ENSLAFG00000008626-10098.734ENSNLEG00000009460-10098.734Nomascus_leucogenys
ENSLAFG00000008626-9499.455ENSMEUG00000008611-9399.455Notamacropus_eugenii
ENSLAFG00000008626-8499.684ENSOPRG00000015116-9999.684Ochotona_princeps
ENSLAFG00000008626-10092.499ENSODEG00000017674-10095.178Octodon_degus
ENSLAFG00000008626-9794.420ENSONIG00000009231polr2a9991.166Oreochromis_niloticus
ENSLAFG00000008626-10097.362ENSOCUG00000017929-10097.710Oryctolagus_cuniculus
ENSLAFG00000008626-9794.296ENSORLG00000006431polr2a9991.059Oryzias_latipes
ENSLAFG00000008626-9794.296ENSORLG00020010235polr2a9991.059Oryzias_latipes_hni
ENSLAFG00000008626-9794.296ENSORLG00015007075polr2a9991.059Oryzias_latipes_hsok
ENSLAFG00000008626-9894.406ENSOMEG00000010713polr2a10094.406Oryzias_melastigma
ENSLAFG00000008626-10099.797ENSOGAG00000033608-10099.797Otolemur_garnettii
ENSLAFG00000008626-9899.735ENSOARG00000013874-10099.735Ovis_aries
ENSLAFG00000008626-10096.904ENSPPAG00000043734-10097.411Pan_paniscus
ENSLAFG00000008626-10098.734ENSPTRG00000008691POLR2A10098.734Pan_troglodytes
ENSLAFG00000008626-10099.239ENSPANG00000024099-10099.239Papio_anubis
ENSLAFG00000008626-8192.793ENSPKIG00000005727polr2a8582.000Paramormyrops_kingsleyae
ENSLAFG00000008626-9896.418ENSPSIG00000014006POLR2A10096.418Pelodiscus_sinensis
ENSLAFG00000008626-10094.225ENSPMGG00000019734polr2a9994.662Periophthalmus_magnuspinnatus
ENSLAFG00000008626-10099.949ENSPEMG00000012521Polr2a10099.949Peromyscus_maniculatus_bairdii
ENSLAFG00000008626-8999.380ENSPCIG00000028851-9687.257Phascolarctos_cinereus
ENSLAFG00000008626-8694.606ENSPFOG00000007890polr2a9994.600Poecilia_formosa
ENSLAFG00000008626-8694.606ENSPLAG00000007399polr2a9994.600Poecilia_latipinna
ENSLAFG00000008626-8694.606ENSPMEG00000002071polr2a9994.600Poecilia_mexicana
ENSLAFG00000008626-9794.544ENSPREG00000013122polr2a9991.272Poecilia_reticulata
ENSLAFG00000008626-10096.755ENSPPYG00000007924-10098.884Pongo_abelii
ENSLAFG00000008626-9299.868ENSPCAG00000006951-9299.868Procavia_capensis
ENSLAFG00000008626-10098.791ENSPCOG00000025260-10098.791Propithecus_coquereli
ENSLAFG00000008626-10099.695ENSPVAG00000005069-10099.695Pteropus_vampyrus
ENSLAFG00000008626-9894.499ENSPNYG00000022340polr2a9991.059Pundamilia_nyererei
ENSLAFG00000008626-9794.606ENSPNAG00000011237polr2a9991.325Pygocentrus_nattereri
ENSLAFG00000008626-10099.848ENSRNOG00000028834Polr2a10099.848Rattus_norvegicus
ENSLAFG00000008626-10093.409ENSRBIG00000002471-10096.548Rhinopithecus_bieti
ENSLAFG00000008626-10099.543ENSRROG00000029583-10099.543Rhinopithecus_roxellana
ENSLAFG00000008626-8288.000YDL140CRPO219980.180Saccharomyces_cerevisiae
ENSLAFG00000008626-10099.949ENSSBOG00000000808-10099.949Saimiri_boliviensis_boliviensis
ENSLAFG00000008626-10097.605ENSSHAG00000002858-10095.575Sarcophilus_harrisii
ENSLAFG00000008626-9594.544ENSSFOG00015023275polr2a10091.272Scleropages_formosus
ENSLAFG00000008626-9793.924ENSSMAG00000009137polr2a9990.633Scophthalmus_maximus
ENSLAFG00000008626-9794.420ENSSDUG00000020466polr2a9991.166Seriola_dumerili
ENSLAFG00000008626-9794.420ENSSLDG00000020613polr2a9991.166Seriola_lalandi_dorsalis
ENSLAFG00000008626-9895.036ENSSARG00000005875-9995.036Sorex_araneus
ENSLAFG00000008626-10094.482ENSSPAG00000016741polr2a9594.475Stegastes_partitus
ENSLAFG00000008626-10099.188ENSSSCG00000028278-10099.188Sus_scrofa
ENSLAFG00000008626-9988.600ENSTRUG00000012320polr2a8188.586Takifugu_rubripes
ENSLAFG00000008626-9992.932ENSTNIG00000010136polr2a10092.924Tetraodon_nigroviridis
ENSLAFG00000008626-74100.000ENSTBEG00000013294-58100.000Tupaia_belangeri
ENSLAFG00000008626-10098.376ENSTTRG00000014273-10098.376Tursiops_truncatus
ENSLAFG00000008626-9696.904ENSUAMG00000014866-10099.505Ursus_americanus
ENSLAFG00000008626-9997.325ENSUMAG00000015732-99100.000Ursus_maritimus
ENSLAFG00000008626-65100.000ENSVPAG00000008842-76100.000Vicugna_pacos
ENSLAFG00000008626-10096.553ENSVVUG00000027878-10098.477Vulpes_vulpes
ENSLAFG00000008626-9996.920ENSXETG00000012465polr2a10096.920Xenopus_tropicalis
ENSLAFG00000008626-9392.374ENSXCOG00000001804polr2a9989.396Xiphophorus_couchianus
ENSLAFG00000008626-9794.544ENSXMAG00000015687polr2a9991.272Xiphophorus_maculatus

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