EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000008824 (Gene tree)
Gene ID: -
Gene Symbol: SBNO2
Alias: FLJ00173|KIAA0963|Sno|Stno
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 41227 bases
Position: chrscaffold_153:797282-838508
Accession: 29158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000021308	ResIII	PF04851.15	1.3e-05	1	1
ENSLAFP00000007415	ResIII	PF04851.15	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000033459	SBNO2-202	3696	-	ENSLAFP00000021308	1231 (aa)	-	G3U0F0
ENSLAFT00000008828	SBNO2-201	4008	-	ENSLAFP00000007415	1335 (aa)	-	G3T2L3

Gene Model

Click here to download ENSLAFG00000008824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000008824's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000008824	SBNO2	75	67.865	ENSLAFG00000002135	SBNO1	81	51.316

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000008824	SBNO2	99	80.173	ENSG00000064932	SBNO2	96	80.754	Homo_sapiens
ENSLAFG00000008824	SBNO2	89	65.817	ENSAPOG00000003185	si:ch73-63e15.2	86	64.305	Acanthochromis_polyacanthus
ENSLAFG00000008824	SBNO2	89	65.905	ENSAOCG00000016581	si:ch73-63e15.2	92	69.620	Amphiprion_ocellaris
ENSLAFG00000008824	SBNO2	89	65.817	ENSAPEG00000008862	si:ch73-63e15.2	74	66.222	Amphiprion_percula
ENSLAFG00000008824	SBNO2	89	65.172	ENSATEG00000023838	si:ch73-63e15.2	91	69.851	Anabas_testudineus
ENSLAFG00000008824	SBNO2	99	68.295	ENSAPLG00000007158	SBNO2	99	67.749	Anas_platyrhynchos
ENSLAFG00000008824	SBNO2	100	78.555	ENSANAG00000026685	SBNO2	96	79.009	Aotus_nancymaae
ENSLAFG00000008824	SBNO2	89	65.297	ENSACLG00000005090	si:ch73-63e15.2	72	64.533	Astatotilapia_calliptera
ENSLAFG00000008824	SBNO2	93	63.598	ENSAMXG00000015881	si:ch73-63e15.2	81	65.724	Astyanax_mexicanus
ENSLAFG00000008824	SBNO2	92	62.305	ENSAMXG00000018868	sbno2a	83	74.558	Astyanax_mexicanus
ENSLAFG00000008824	SBNO2	100	82.025	ENSBTAG00000020780	SBNO2	97	82.418	Bos_taurus
ENSLAFG00000008824	SBNO2	100	81.333	ENSCAFG00000019543	SBNO2	97	79.574	Canis_familiaris
ENSLAFG00000008824	SBNO2	92	85.026	ENSCAFG00020017115	SBNO2	97	81.309	Canis_lupus_dingo
ENSLAFG00000008824	SBNO2	100	82.441	ENSCHIG00000026127	SBNO2	94	82.873	Capra_hircus
ENSLAFG00000008824	SBNO2	88	81.445	ENSCAPG00000005731	SBNO2	99	77.514	Cavia_aperea
ENSLAFG00000008824	SBNO2	100	78.357	ENSCPOG00000007477	SBNO2	99	74.381	Cavia_porcellus
ENSLAFG00000008824	SBNO2	99	78.661	ENSCCAG00000037518	SBNO2	99	76.555	Cebus_capucinus
ENSLAFG00000008824	SBNO2	99	79.858	ENSCATG00000037046	SBNO2	96	81.083	Cercocebus_atys
ENSLAFG00000008824	SBNO2	89	83.525	ENSCLAG00000010178	SBNO2	97	83.791	Chinchilla_lanigera
ENSLAFG00000008824	SBNO2	99	79.622	ENSCSAG00000012317	SBNO2	98	78.210	Chlorocebus_sabaeus
ENSLAFG00000008824	SBNO2	99	69.704	ENSCPBG00000008920	SBNO2	92	74.074	Chrysemys_picta_bellii
ENSLAFG00000008824	SBNO2	84	82.500	ENSCANG00000036745	SBNO2	95	81.793	Colobus_angolensis_palliatus
ENSLAFG00000008824	SBNO2	100	77.154	ENSCGRG00001023960	Sbno2	99	74.031	Cricetulus_griseus_chok1gshd
ENSLAFG00000008824	SBNO2	100	78.910	ENSCGRG00000011984	Sbno2	99	75.786	Cricetulus_griseus_crigri
ENSLAFG00000008824	SBNO2	89	63.009	ENSCSEG00000006856	si:ch73-63e15.2	90	65.898	Cynoglossus_semilaevis
ENSLAFG00000008824	SBNO2	89	65.847	ENSCVAG00000005663	si:ch73-63e15.2	76	65.425	Cyprinodon_variegatus
ENSLAFG00000008824	SBNO2	86	63.961	ENSDARG00000098801	sbno2a	76	66.763	Danio_rerio
ENSLAFG00000008824	SBNO2	89	65.398	ENSDARG00000016188	SBNO2	80	65.603	Danio_rerio
ENSLAFG00000008824	SBNO2	100	80.411	ENSDORG00000002916	Sbno2	99	76.638	Dipodomys_ordii
ENSLAFG00000008824	SBNO2	100	81.432	ENSEASG00005021621	SBNO2	97	82.140	Equus_asinus_asinus
ENSLAFG00000008824	SBNO2	100	81.353	ENSECAG00000011827	SBNO2	97	82.061	Equus_caballus
ENSLAFG00000008824	SBNO2	89	66.579	ENSELUG00000020457	si:ch73-63e15.2	78	65.714	Esox_lucius
ENSLAFG00000008824	SBNO2	92	72.658	ENSFALG00000013988	SBNO2	90	70.218	Ficedula_albicollis
ENSLAFG00000008824	SBNO2	99	75.000	ENSFDAG00000015186	SBNO2	93	79.863	Fukomys_damarensis
ENSLAFG00000008824	SBNO2	89	65.061	ENSFHEG00000022262	si:ch73-63e15.2	74	64.991	Fundulus_heteroclitus
ENSLAFG00000008824	SBNO2	94	63.386	ENSGMOG00000007542	si:ch73-63e15.2	96	64.298	Gadus_morhua
ENSLAFG00000008824	SBNO2	99	66.970	ENSGALG00000037522	SBNO2	86	70.455	Gallus_gallus
ENSLAFG00000008824	SBNO2	89	65.606	ENSGAFG00000004860	si:ch73-63e15.2	88	65.722	Gambusia_affinis
ENSLAFG00000008824	SBNO2	89	65.669	ENSGACG00000013190	si:ch73-63e15.2	93	66.197	Gasterosteus_aculeatus
ENSLAFG00000008824	SBNO2	99	67.649	ENSGAGG00000008348	SBNO2	88	71.248	Gopherus_agassizii
ENSLAFG00000008824	SBNO2	89	65.442	ENSHBUG00000010742	si:ch73-63e15.2	76	64.675	Haplochromis_burtoni
ENSLAFG00000008824	SBNO2	100	81.024	ENSHGLG00000008739	SBNO2	98	77.999	Heterocephalus_glaber_female
ENSLAFG00000008824	SBNO2	94	80.387	ENSHGLG00100005269	SBNO2	97	84.234	Heterocephalus_glaber_male
ENSLAFG00000008824	SBNO2	89	65.633	ENSHCOG00000000884	si:ch73-63e15.2	83	65.810	Hippocampus_comes
ENSLAFG00000008824	SBNO2	89	66.254	ENSIPUG00000000537	si:ch73-63e15.2	84	64.726	Ictalurus_punctatus
ENSLAFG00000008824	SBNO2	89	64.060	ENSIPUG00000019672	sbno2	91	69.206	Ictalurus_punctatus
ENSLAFG00000008824	SBNO2	99	80.971	ENSSTOG00000025832	SBNO2	98	77.933	Ictidomys_tridecemlineatus
ENSLAFG00000008824	SBNO2	99	76.643	ENSJJAG00000017397	Sbno2	99	73.665	Jaculus_jaculus
ENSLAFG00000008824	SBNO2	89	66.227	ENSKMAG00000005541	si:ch73-63e15.2	76	65.601	Kryptolebias_marmoratus
ENSLAFG00000008824	SBNO2	89	65.075	ENSLBEG00000025016	si:ch73-63e15.2	94	69.442	Labrus_bergylta
ENSLAFG00000008824	SBNO2	52	62.801	ENSLBEG00000005937	-	99	62.908	Labrus_bergylta
ENSLAFG00000008824	SBNO2	52	72.435	ENSLACG00000012598	SBNO2	94	76.182	Latimeria_chalumnae
ENSLAFG00000008824	SBNO2	89	66.813	ENSLOCG00000004643	si:ch73-63e15.2	82	66.549	Lepisosteus_oculatus
ENSLAFG00000008824	SBNO2	99	78.147	ENSMFAG00000040030	SBNO2	96	78.910	Macaca_fascicularis
ENSLAFG00000008824	SBNO2	99	80.110	ENSMMUG00000010886	SBNO2	99	78.314	Macaca_mulatta
ENSLAFG00000008824	SBNO2	99	79.858	ENSMNEG00000039927	SBNO2	96	80.926	Macaca_nemestrina
ENSLAFG00000008824	SBNO2	79	87.423	ENSMLEG00000038556	SBNO2	90	84.019	Mandrillus_leucophaeus
ENSLAFG00000008824	SBNO2	89	65.963	ENSMAMG00000018758	si:ch73-63e15.2	73	66.021	Mastacembelus_armatus
ENSLAFG00000008824	SBNO2	89	65.354	ENSMZEG00005010682	si:ch73-63e15.2	72	64.589	Maylandia_zebra
ENSLAFG00000008824	SBNO2	99	68.392	ENSMGAG00000003801	SBNO2	96	68.314	Meleagris_gallopavo
ENSLAFG00000008824	SBNO2	100	78.718	ENSMAUG00000008034	Sbno2	99	75.769	Mesocricetus_auratus
ENSLAFG00000008824	SBNO2	100	81.117	ENSMICG00000013071	SBNO2	96	81.339	Microcebus_murinus
ENSLAFG00000008824	SBNO2	100	77.488	ENSMOCG00000010504	Sbno2	98	75.332	Microtus_ochrogaster
ENSLAFG00000008824	SBNO2	100	70.965	ENSMODG00000005382	SBNO2	97	69.275	Monodelphis_domestica
ENSLAFG00000008824	SBNO2	76	64.043	ENSMALG00000021831	si:ch73-63e15.2	94	64.111	Monopterus_albus
ENSLAFG00000008824	SBNO2	100	78.910	ENSMUSG00000035673	Sbno2	98	78.151	Mus_musculus
ENSLAFG00000008824	SBNO2	100	79.130	MGP_PahariEiJ_G0030976	Sbno2	98	76.071	Mus_pahari
ENSLAFG00000008824	SBNO2	100	79.130	MGP_SPRETEiJ_G0016381	Sbno2	97	77.840	Mus_spretus
ENSLAFG00000008824	SBNO2	78	88.935	ENSMPUG00000008747	SBNO2	96	85.687	Mustela_putorius_furo
ENSLAFG00000008824	SBNO2	100	76.643	ENSNGAG00000004308	Sbno2	98	75.353	Nannospalax_galili
ENSLAFG00000008824	SBNO2	86	64.499	ENSNBRG00000022968	si:ch73-63e15.2	97	70.316	Neolamprologus_brichardi
ENSLAFG00000008824	SBNO2	93	83.414	ENSNLEG00000001305	SBNO2	96	83.386	Nomascus_leucogenys
ENSLAFG00000008824	SBNO2	74	70.116	ENSMEUG00000013511	-	78	70.116	Notamacropus_eugenii
ENSLAFG00000008824	SBNO2	96	77.997	ENSOPRG00000017238	SBNO2	99	77.258	Ochotona_princeps
ENSLAFG00000008824	SBNO2	100	78.470	ENSODEG00000011822	SBNO2	99	75.865	Octodon_degus
ENSLAFG00000008824	SBNO2	89	65.617	ENSONIG00000002490	si:ch73-63e15.2	90	65.187	Oreochromis_niloticus
ENSLAFG00000008824	SBNO2	89	65.145	ENSORLG00000000913	si:ch73-63e15.2	76	65.183	Oryzias_latipes
ENSLAFG00000008824	SBNO2	89	65.145	ENSORLG00020010978	si:ch73-63e15.2	76	65.183	Oryzias_latipes_hni
ENSLAFG00000008824	SBNO2	89	65.145	ENSORLG00015000202	si:ch73-63e15.2	76	65.271	Oryzias_latipes_hsok
ENSLAFG00000008824	SBNO2	90	65.066	ENSOMEG00000000359	si:ch73-63e15.2	72	65.191	Oryzias_melastigma
ENSLAFG00000008824	SBNO2	100	76.235	ENSOARG00000011130	SBNO2	97	73.441	Ovis_aries
ENSLAFG00000008824	SBNO2	99	78.319	ENSPPAG00000032482	SBNO2	96	78.605	Pan_paniscus
ENSLAFG00000008824	SBNO2	99	80.173	ENSPTRG00000010185	SBNO2	99	78.598	Pan_troglodytes
ENSLAFG00000008824	SBNO2	99	76.554	ENSPANG00000009658	SBNO2	96	77.786	Papio_anubis
ENSLAFG00000008824	SBNO2	80	66.994	ENSPKIG00000009707	-	83	67.062	Paramormyrops_kingsleyae
ENSLAFG00000008824	SBNO2	89	64.362	ENSPKIG00000024201	si:ch73-63e15.2	83	64.089	Paramormyrops_kingsleyae
ENSLAFG00000008824	SBNO2	78	77.881	ENSPSIG00000002852	SBNO2	98	77.547	Pelodiscus_sinensis
ENSLAFG00000008824	SBNO2	89	64.716	ENSPMGG00000014375	si:ch73-63e15.2	85	64.539	Periophthalmus_magnuspinnatus
ENSLAFG00000008824	SBNO2	100	77.251	ENSPEMG00000024122	Sbno2	99	73.669	Peromyscus_maniculatus_bairdii
ENSLAFG00000008824	SBNO2	99	72.209	ENSPCIG00000011264	SBNO2	98	69.666	Phascolarctos_cinereus
ENSLAFG00000008824	SBNO2	89	65.412	ENSPFOG00000004096	si:ch73-63e15.2	99	64.858	Poecilia_formosa
ENSLAFG00000008824	SBNO2	89	65.499	ENSPLAG00000014653	si:ch73-63e15.2	75	65.557	Poecilia_latipinna
ENSLAFG00000008824	SBNO2	89	65.517	ENSPMEG00000002129	si:ch73-63e15.2	89	68.936	Poecilia_mexicana
ENSLAFG00000008824	SBNO2	89	65.587	ENSPREG00000006755	si:ch73-63e15.2	72	65.520	Poecilia_reticulata
ENSLAFG00000008824	SBNO2	97	79.598	ENSPCAG00000012256	SBNO2	96	79.756	Procavia_capensis
ENSLAFG00000008824	SBNO2	100	73.396	ENSPCOG00000015216	SBNO2	96	74.135	Propithecus_coquereli
ENSLAFG00000008824	SBNO2	89	65.354	ENSPNYG00000019926	si:ch73-63e15.2	76	64.589	Pundamilia_nyererei
ENSLAFG00000008824	SBNO2	92	62.326	ENSPNAG00000026609	sbno2a	82	69.131	Pygocentrus_nattereri
ENSLAFG00000008824	SBNO2	96	62.643	ENSPNAG00000020260	si:ch73-63e15.2	80	66.307	Pygocentrus_nattereri
ENSLAFG00000008824	SBNO2	100	79.180	ENSRNOG00000013987	Sbno2	97	79.890	Rattus_norvegicus
ENSLAFG00000008824	SBNO2	90	76.077	ENSRBIG00000009740	SBNO2	94	75.021	Rhinopithecus_bieti
ENSLAFG00000008824	SBNO2	89	87.875	ENSRROG00000044671	SBNO2	97	85.971	Rhinopithecus_roxellana
ENSLAFG00000008824	SBNO2	99	78.425	ENSSBOG00000023562	SBNO2	99	76.707	Saimiri_boliviensis_boliviensis
ENSLAFG00000008824	SBNO2	88	75.358	ENSSHAG00000010241	SBNO2	99	74.132	Sarcophilus_harrisii
ENSLAFG00000008824	SBNO2	88	64.464	ENSSFOG00015005861	si:ch73-63e15.2	90	64.769	Scleropages_formosus
ENSLAFG00000008824	SBNO2	89	64.908	ENSSMAG00000012489	si:ch73-63e15.2	72	65.229	Scophthalmus_maximus
ENSLAFG00000008824	SBNO2	89	65.875	ENSSDUG00000003527	si:ch73-63e15.2	72	66.167	Seriola_dumerili
ENSLAFG00000008824	SBNO2	89	65.727	ENSSLDG00000004623	si:ch73-63e15.2	72	65.785	Seriola_lalandi_dorsalis
ENSLAFG00000008824	SBNO2	89	66.227	ENSSPAG00000017717	si:ch73-63e15.2	73	66.489	Stegastes_partitus
ENSLAFG00000008824	SBNO2	99	82.855	ENSSSCG00000030042	SBNO2	96	83.333	Sus_scrofa
ENSLAFG00000008824	SBNO2	87	65.072	ENSTRUG00000018193	si:ch73-63e15.2	85	65.221	Takifugu_rubripes
ENSLAFG00000008824	SBNO2	84	89.775	ENSUAMG00000006568	SBNO2	100	80.893	Ursus_americanus
ENSLAFG00000008824	SBNO2	100	78.484	ENSVVUG00000022823	SBNO2	98	76.951	Vulpes_vulpes
ENSLAFG00000008824	SBNO2	81	78.812	ENSXETG00000021579	sbno2	88	80.705	Xenopus_tropicalis
ENSLAFG00000008824	SBNO2	83	64.632	ENSXCOG00000009209	si:ch73-63e15.2	89	69.475	Xiphophorus_couchianus
ENSLAFG00000008824	SBNO2	89	65.429	ENSXMAG00000012091	si:ch73-63e15.2	81	68.138	Xiphophorus_maculatus