EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLAFG00000008884 (Gene tree)
Gene ID
-
Gene Symbol
YTHDF1
Alias
C20orf21|FLJ20391
Full Name
YTH N6-methyladenosine RNA binding protein 1
Gene Type
protein_coding
Species
Loxodonta_africana
Status
putative
Strand
Plus strand
Length
15369 bases
Position
chrscaffold_121:957849-973217
Accession
100665271
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLAFP00000007460YTHPF04146.152.2e-4111
ENSLAFP00000020379YTHPF04146.152.6e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLAFT00000008885YTHDF1-2021680-ENSLAFP00000007460559 (aa)XP_003421814G3T2Q5
ENSLAFT00000033447YTHDF1-2011758-ENSLAFP00000020379585 (aa)-G3TXS1
Gene Model
Click here to download ENSLAFG00000008884's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000008884's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLAFG00000008884YTHDF19766.093ENSLAFG00000016052YTHDF310067.112
ENSLAFG00000008884YTHDF19963.590ENSLAFG00000030451YTHDF210064.200
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLAFG00000008884YTHDF110091.771ENSG00000149658YTHDF110091.771Homo_sapiens
ENSLAFG00000008884YTHDF110074.570ENSAPOG00000010796YTHDF110074.699Acanthochromis_polyacanthus
ENSLAFG00000008884YTHDF19673.166ENSAPOG00000004358ythdf19774.291Acanthochromis_polyacanthus
ENSLAFG00000008884YTHDF19993.103ENSAMEG00000017323YTHDF19893.103Ailuropoda_melanoleuca
ENSLAFG00000008884YTHDF19670.996ENSACIG00000011264ythdf19771.201Amphilophus_citrinellus
ENSLAFG00000008884YTHDF110074.177ENSACIG00000020083YTHDF110074.567Amphilophus_citrinellus
ENSLAFG00000008884YTHDF19970.909ENSAOCG00000022251ythdf19874.382Amphiprion_ocellaris
ENSLAFG00000008884YTHDF110073.785ENSAOCG00000012567YTHDF110074.350Amphiprion_ocellaris
ENSLAFG00000008884YTHDF110073.785ENSAPEG00000008750YTHDF110074.350Amphiprion_percula
ENSLAFG00000008884YTHDF19670.678ENSAPEG00000021878ythdf19571.765Amphiprion_percula
ENSLAFG00000008884YTHDF19672.679ENSATEG00000023840ythdf19873.451Anabas_testudineus
ENSLAFG00000008884YTHDF110073.830ENSATEG00000005996YTHDF110074.913Anabas_testudineus
ENSLAFG00000008884YTHDF19988.151ENSAPLG00000005985YTHDF19989.587Anas_platyrhynchos
ENSLAFG00000008884YTHDF110085.893ENSACAG00000005560YTHDF110087.166Anolis_carolinensis
ENSLAFG00000008884YTHDF110077.996ENSANAG00000021022-10077.996Aotus_nancymaae
ENSLAFG00000008884YTHDF110091.234ENSANAG00000034786-10091.234Aotus_nancymaae
ENSLAFG00000008884YTHDF110073.611ENSACLG00000025518YTHDF110074.177Astatotilapia_calliptera
ENSLAFG00000008884YTHDF110089.267ENSBTAG00000010383YTHDF110089.267Bos_taurus
ENSLAFG00000008884YTHDF110091.950ENSCJAG00000010056YTHDF110091.950Callithrix_jacchus
ENSLAFG00000008884YTHDF19192.323ENSCAFG00000012772YTHDF19992.323Canis_familiaris
ENSLAFG00000008884YTHDF19192.323ENSCAFG00020001214YTHDF19992.323Canis_lupus_dingo
ENSLAFG00000008884YTHDF110088.730ENSCHIG00000026494YTHDF110088.730Capra_hircus
ENSLAFG00000008884YTHDF19990.485ENSTSYG00000033436YTHDF19990.485Carlito_syrichta
ENSLAFG00000008884YTHDF19788.376ENSCAPG00000002544YTHDF19488.051Cavia_aperea
ENSLAFG00000008884YTHDF110090.161ENSCPOG00000010202YTHDF110090.161Cavia_porcellus
ENSLAFG00000008884YTHDF110091.234ENSCCAG00000024650YTHDF110091.234Cebus_capucinus
ENSLAFG00000008884YTHDF110091.413ENSCATG00000033272YTHDF110091.413Cercocebus_atys
ENSLAFG00000008884YTHDF110091.964ENSCLAG00000005989YTHDF110091.964Chinchilla_lanigera
ENSLAFG00000008884YTHDF110091.592ENSCSAG00000016266YTHDF110091.592Chlorocebus_sabaeus
ENSLAFG00000008884YTHDF110089.464ENSCPBG00000027183YTHDF110089.464Chrysemys_picta_bellii
ENSLAFG00000008884YTHDF19991.470ENSCANG00000029082YTHDF19891.470Colobus_angolensis_palliatus
ENSLAFG00000008884YTHDF110092.308ENSCGRG00001016568Ythdf110092.308Cricetulus_griseus_chok1gshd
ENSLAFG00000008884YTHDF19892.182ENSCGRG00000009207Ythdf110092.182Cricetulus_griseus_crigri
ENSLAFG00000008884YTHDF19672.810ENSCSEG00000020623YTHDF19874.047Cynoglossus_semilaevis
ENSLAFG00000008884YTHDF19773.571ENSCVAG00000014378YTHDF110074.336Cyprinodon_variegatus
ENSLAFG00000008884YTHDF19971.178ENSCVAG00000017940ythdf19771.836Cyprinodon_variegatus
ENSLAFG00000008884YTHDF110090.161ENSDNOG00000043590YTHDF110090.161Dasypus_novemcinctus
ENSLAFG00000008884YTHDF19885.986ENSDORG00000002879Ythdf110085.986Dipodomys_ordii
ENSLAFG00000008884YTHDF17966.013ENSETEG00000017860-9866.013Echinops_telfairi
ENSLAFG00000008884YTHDF110092.844ENSEASG00005023186YTHDF110092.844Equus_asinus_asinus
ENSLAFG00000008884YTHDF19892.545ENSECAG00000019475YTHDF110092.338Equus_caballus
ENSLAFG00000008884YTHDF19290.485ENSEEUG00000007461YTHDF110090.485Erinaceus_europaeus
ENSLAFG00000008884YTHDF19972.542ENSELUG00000022768ythdf19973.898Esox_lucius
ENSLAFG00000008884YTHDF19474.217ENSELUG00000001906YTHDF19974.862Esox_lucius
ENSLAFG00000008884YTHDF110092.129ENSFCAG00000008917YTHDF110092.129Felis_catus
ENSLAFG00000008884YTHDF110089.821ENSFALG00000010463YTHDF110089.821Ficedula_albicollis
ENSLAFG00000008884YTHDF110090.698ENSFDAG00000019602YTHDF110090.698Fukomys_damarensis
ENSLAFG00000008884YTHDF19775.000ENSFHEG00000002540YTHDF19975.267Fundulus_heteroclitus
ENSLAFG00000008884YTHDF19971.958ENSFHEG00000023218ythdf19871.914Fundulus_heteroclitus
ENSLAFG00000008884YTHDF18687.179ENSGMOG00000019610ythdf19569.231Gadus_morhua
ENSLAFG00000008884YTHDF110088.592ENSGALG00000005745YTHDF110090.018Gallus_gallus
ENSLAFG00000008884YTHDF110072.488ENSGAFG00000021100YTHDF19974.552Gambusia_affinis
ENSLAFG00000008884YTHDF19672.154ENSGACG00000012014ythdf19572.348Gasterosteus_aculeatus
ENSLAFG00000008884YTHDF110073.818ENSGACG00000002613YTHDF110073.986Gasterosteus_aculeatus
ENSLAFG00000008884YTHDF110089.286ENSGAGG00000003007YTHDF110089.286Gopherus_agassizii
ENSLAFG00000008884YTHDF110092.129ENSGGOG00000008340YTHDF110092.129Gorilla_gorilla
ENSLAFG00000008884YTHDF110073.438ENSHBUG00000004875YTHDF110074.003Haplochromis_burtoni
ENSLAFG00000008884YTHDF19671.605ENSHBUG00000011284ythdf19871.804Haplochromis_burtoni
ENSLAFG00000008884YTHDF110091.592ENSHGLG00000006585YTHDF110091.592Heterocephalus_glaber_female
ENSLAFG00000008884YTHDF110091.592ENSHGLG00100004683YTHDF110091.592Heterocephalus_glaber_male
ENSLAFG00000008884YTHDF110070.161ENSHCOG00000011303YTHDF110074.128Hippocampus_comes
ENSLAFG00000008884YTHDF19971.000ENSHCOG00000008866ythdf19871.138Hippocampus_comes
ENSLAFG00000008884YTHDF19776.182ENSIPUG00000000425Ythdf19877.536Ictalurus_punctatus
ENSLAFG00000008884YTHDF19991.470ENSSTOG00000023001YTHDF19991.470Ictidomys_tridecemlineatus
ENSLAFG00000008884YTHDF19892.000ENSJJAG00000013589Ythdf110092.000Jaculus_jaculus
ENSLAFG00000008884YTHDF19671.841ENSKMAG00000005595ythdf19871.864Kryptolebias_marmoratus
ENSLAFG00000008884YTHDF19774.286ENSKMAG00000017472YTHDF110074.823Kryptolebias_marmoratus
ENSLAFG00000008884YTHDF19672.662ENSLBEG00000014105ythdf19473.393Labrus_bergylta
ENSLAFG00000008884YTHDF110074.355ENSLBEG00000012068YTHDF110074.527Labrus_bergylta
ENSLAFG00000008884YTHDF19681.801ENSLACG00000014195YTHDF19684.270Latimeria_chalumnae
ENSLAFG00000008884YTHDF110077.530ENSLOCG00000005020ythdf19580.289Lepisosteus_oculatus
ENSLAFG00000008884YTHDF110091.592ENSMFAG00000042868YTHDF110091.592Macaca_fascicularis
ENSLAFG00000008884YTHDF110091.592ENSMMUG00000009227YTHDF110091.592Macaca_mulatta
ENSLAFG00000008884YTHDF110091.592ENSMNEG00000030851YTHDF110091.592Macaca_nemestrina
ENSLAFG00000008884YTHDF19891.636ENSMLEG00000009252YTHDF110091.636Mandrillus_leucophaeus
ENSLAFG00000008884YTHDF110074.740ENSMAMG00000011072YTHDF110075.000Mastacembelus_armatus
ENSLAFG00000008884YTHDF19671.377ENSMAMG00000024255ythdf19972.348Mastacembelus_armatus
ENSLAFG00000008884YTHDF19672.760ENSMZEG00005026397ythdf19872.954Maylandia_zebra
ENSLAFG00000008884YTHDF110073.438ENSMZEG00005023596YTHDF110074.003Maylandia_zebra
ENSLAFG00000008884YTHDF19987.657ENSMGAG00000006139YTHDF19989.088Meleagris_gallopavo
ENSLAFG00000008884YTHDF110091.950ENSMAUG00000017660Ythdf110091.950Mesocricetus_auratus
ENSLAFG00000008884YTHDF110091.950ENSMICG00000032266YTHDF110091.950Microcebus_murinus
ENSLAFG00000008884YTHDF110091.592ENSMOCG00000013573Ythdf110091.592Microtus_ochrogaster
ENSLAFG00000008884YTHDF19668.664ENSMMOG00000017500ythdf19669.966Mola_mola
ENSLAFG00000008884YTHDF19970.559ENSMMOG00000020467YTHDF19473.005Mola_mola
ENSLAFG00000008884YTHDF19190.215ENSMODG00000016842YTHDF110090.215Monodelphis_domestica
ENSLAFG00000008884YTHDF110072.945ENSMALG00000022209YTHDF110074.093Monopterus_albus
ENSLAFG00000008884YTHDF19671.429ENSMALG00000015672ythdf19672.242Monopterus_albus
ENSLAFG00000008884YTHDF110091.771MGP_CAROLIEiJ_G0024790Ythdf110091.771Mus_caroli
ENSLAFG00000008884YTHDF110091.771ENSMUSG00000038848Ythdf110091.771Mus_musculus
ENSLAFG00000008884YTHDF110091.413MGP_PahariEiJ_G0026237Ythdf110091.413Mus_pahari
ENSLAFG00000008884YTHDF110091.771MGP_SPRETEiJ_G0025715Ythdf110091.771Mus_spretus
ENSLAFG00000008884YTHDF19186.248ENSMPUG00000008111YTHDF110087.033Mustela_putorius_furo
ENSLAFG00000008884YTHDF19792.251ENSMLUG00000002241YTHDF19890.778Myotis_lucifugus
ENSLAFG00000008884YTHDF110092.129ENSNGAG00000000334Ythdf110092.129Nannospalax_galili
ENSLAFG00000008884YTHDF110073.438ENSNBRG00000015321YTHDF110074.003Neolamprologus_brichardi
ENSLAFG00000008884YTHDF19969.655ENSNBRG00000008213ythdf19770.548Neolamprologus_brichardi
ENSLAFG00000008884YTHDF19578.531ENSOPRG00000001758-9878.585Ochotona_princeps
ENSLAFG00000008884YTHDF110071.631ENSODEG00000000074-10074.291Octodon_degus
ENSLAFG00000008884YTHDF110090.714ENSODEG00000004380-10090.714Octodon_degus
ENSLAFG00000008884YTHDF19670.261ENSONIG00000016799ythdf19770.639Oreochromis_niloticus
ENSLAFG00000008884YTHDF110089.127ENSOANG00000003723YTHDF110089.840Ornithorhynchus_anatinus
ENSLAFG00000008884YTHDF110081.317ENSOCUG00000012780YTHDF110081.317Oryctolagus_cuniculus
ENSLAFG00000008884YTHDF19773.619ENSORLG00000009739YTHDF19974.332Oryzias_latipes
ENSLAFG00000008884YTHDF19669.603ENSORLG00000014665YTHDF19570.154Oryzias_latipes
ENSLAFG00000008884YTHDF19670.069ENSORLG00020000307ythdf19570.619Oryzias_latipes_hni
ENSLAFG00000008884YTHDF19774.549ENSORLG00020001332YTHDF19975.090Oryzias_latipes_hni
ENSLAFG00000008884YTHDF110071.192ENSORLG00015018321YTHDF19973.975Oryzias_latipes_hsok
ENSLAFG00000008884YTHDF19670.242ENSORLG00015006302ythdf19570.790Oryzias_latipes_hsok
ENSLAFG00000008884YTHDF110070.340ENSOMEG00000011843YTHDF19572.743Oryzias_melastigma
ENSLAFG00000008884YTHDF19672.482ENSOMEG00000002941YTHDF19872.500Oryzias_melastigma
ENSLAFG00000008884YTHDF110091.055ENSOGAG00000000480YTHDF110091.055Otolemur_garnettii
ENSLAFG00000008884YTHDF19984.211ENSOARG00000011639YTHDF19885.481Ovis_aries
ENSLAFG00000008884YTHDF19992.196ENSPPAG00000023277YTHDF110092.196Pan_paniscus
ENSLAFG00000008884YTHDF110092.308ENSPPRG00000020805YTHDF110092.308Panthera_pardus
ENSLAFG00000008884YTHDF19975.136ENSPTIG00000017355YTHDF19983.122Panthera_tigris_altaica
ENSLAFG00000008884YTHDF110092.129ENSPTRG00000013730YTHDF110092.129Pan_troglodytes
ENSLAFG00000008884YTHDF110091.592ENSPANG00000021472YTHDF110091.592Papio_anubis
ENSLAFG00000008884YTHDF19972.598ENSPKIG00000005026YTHDF19773.646Paramormyrops_kingsleyae
ENSLAFG00000008884YTHDF110069.739ENSPKIG00000005427ythdf110072.049Paramormyrops_kingsleyae
ENSLAFG00000008884YTHDF19788.828ENSPSIG00000005529YTHDF19689.385Pelodiscus_sinensis
ENSLAFG00000008884YTHDF19773.756ENSPMGG00000009101YTHDF19974.443Periophthalmus_magnuspinnatus
ENSLAFG00000008884YTHDF19371.377ENSPMGG00000015328ythdf19672.302Periophthalmus_magnuspinnatus
ENSLAFG00000008884YTHDF19891.636ENSPEMG00000020199Ythdf110091.636Peromyscus_maniculatus_bairdii
ENSLAFG00000008884YTHDF19988.809ENSPCIG00000017170YTHDF110089.824Phascolarctos_cinereus
ENSLAFG00000008884YTHDF19970.000ENSPFOG00000005405ythdf19571.453Poecilia_formosa
ENSLAFG00000008884YTHDF110070.418ENSPLAG00000006298YTHDF19572.466Poecilia_latipinna
ENSLAFG00000008884YTHDF19972.438ENSPLAG00000006653ythdf19872.760Poecilia_latipinna
ENSLAFG00000008884YTHDF110072.696ENSPMEG00000020969-10072.696Poecilia_mexicana
ENSLAFG00000008884YTHDF19972.134ENSPMEG00000023753ythdf19872.093Poecilia_mexicana
ENSLAFG00000008884YTHDF19972.085ENSPREG00000002173ythdf19872.760Poecilia_reticulata
ENSLAFG00000008884YTHDF19770.413ENSPREG00000017662YTHDF19472.318Poecilia_reticulata
ENSLAFG00000008884YTHDF18796.020ENSPPYG00000011226YTHDF110096.020Pongo_abelii
ENSLAFG00000008884YTHDF18988.889ENSPCAG00000002452YTHDF19888.778Procavia_capensis
ENSLAFG00000008884YTHDF110092.665ENSPCOG00000025969YTHDF110092.665Propithecus_coquereli
ENSLAFG00000008884YTHDF19883.636ENSPVAG00000017568YTHDF19884.288Pteropus_vampyrus
ENSLAFG00000008884YTHDF110073.438ENSPNYG00000002266YTHDF110074.003Pundamilia_nyererei
ENSLAFG00000008884YTHDF19672.760ENSPNYG00000014007ythdf19872.954Pundamilia_nyererei
ENSLAFG00000008884YTHDF110069.984ENSPNAG00000012447ythdf110073.333Pygocentrus_nattereri
ENSLAFG00000008884YTHDF110091.413ENSRNOG00000027015Ythdf110091.413Rattus_norvegicus
ENSLAFG00000008884YTHDF110090.698ENSRBIG00000044959YTHDF110090.698Rhinopithecus_bieti
ENSLAFG00000008884YTHDF110090.519ENSRROG00000033014YTHDF110090.519Rhinopithecus_roxellana
ENSLAFG00000008884YTHDF19789.483ENSSBOG00000027278YTHDF110089.194Saimiri_boliviensis_boliviensis
ENSLAFG00000008884YTHDF19988.530ENSSHAG00000010430YTHDF18989.964Sarcophilus_harrisii
ENSLAFG00000008884YTHDF110072.881ENSSFOG00015000284ythdf110074.576Scleropages_formosus
ENSLAFG00000008884YTHDF19776.066ENSSMAG00000007635YTHDF19474.250Scophthalmus_maximus
ENSLAFG00000008884YTHDF19063.867ENSSMAG00000013715ythdf19464.741Scophthalmus_maximus
ENSLAFG00000008884YTHDF19673.835ENSSDUG00000000435ythdf19674.778Seriola_dumerili
ENSLAFG00000008884YTHDF19975.395ENSSDUG00000015823YTHDF19975.395Seriola_dumerili
ENSLAFG00000008884YTHDF19670.790ENSSLDG00000024948ythdf19671.721Seriola_lalandi_dorsalis
ENSLAFG00000008884YTHDF110069.716ENSSLDG00000001054YTHDF110072.632Seriola_lalandi_dorsalis
ENSLAFG00000008884YTHDF19186.275ENSSPUG00000015143YTHDF110088.258Sphenodon_punctatus
ENSLAFG00000008884YTHDF110072.852ENSSPAG00000003666YTHDF110073.413Stegastes_partitus
ENSLAFG00000008884YTHDF19669.374ENSSPAG00000014989ythdf19670.302Stegastes_partitus
ENSLAFG00000008884YTHDF110087.857ENSSSCG00000040086YTHDF110088.214Sus_scrofa
ENSLAFG00000008884YTHDF19988.427ENSTGUG00000007565YTHDF110089.873Taeniopygia_guttata
ENSLAFG00000008884YTHDF19971.739ENSTRUG00000004288ythdf19871.331Takifugu_rubripes
ENSLAFG00000008884YTHDF19671.356ENSTRUG00000005049YTHDF19872.391Takifugu_rubripes
ENSLAFG00000008884YTHDF110072.378ENSTNIG00000003975YTHDF110072.902Tetraodon_nigroviridis
ENSLAFG00000008884YTHDF19972.183ENSTNIG00000012490ythdf19973.345Tetraodon_nigroviridis
ENSLAFG00000008884YTHDF19988.587ENSTTRG00000001804YTHDF19888.582Tursiops_truncatus
ENSLAFG00000008884YTHDF19792.989ENSUAMG00000011021YTHDF110092.534Ursus_americanus
ENSLAFG00000008884YTHDF19192.141ENSUMAG00000022290YTHDF110092.141Ursus_maritimus
ENSLAFG00000008884YTHDF19191.929ENSVVUG00000015275YTHDF19991.929Vulpes_vulpes
ENSLAFG00000008884YTHDF19683.395ENSXETG00000027086ythdf19683.088Xenopus_tropicalis
ENSLAFG00000008884YTHDF19672.678ENSXCOG00000002490ythdf19373.383Xiphophorus_couchianus
ENSLAFG00000008884YTHDF19770.861ENSXCOG00000008115YTHDF19472.648Xiphophorus_couchianus
ENSLAFG00000008884YTHDF19774.240ENSXMAG00000015644YTHDF19975.313Xiphophorus_maculatus
ENSLAFG00000008884YTHDF19672.761ENSXMAG00000008525ythdf19573.346Xiphophorus_maculatus

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