EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000008890 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 5495 bases
Position: chrscaffold_73:6516646-6522140
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000007464	APOBEC_N	PF08210.11	3.8e-45	1	1
ENSLAFP00000007464	APOBEC_C	PF05240.14	2.2e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000008889	-	600	-	ENSLAFP00000007464	200 (aa)	-	G3T2Q9

Gene Model

Click here to download ENSLAFG00000008890's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000008890's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000008890	-	86	43.931	ENSLAFG00000027404	-	87	43.931
ENSLAFG00000008890	-	89	58.989	ENSLAFG00000005275	-	99	58.989
ENSLAFG00000008890	-	92	55.932	ENSLAFG00000020906	-	92	56.977
ENSLAFG00000008890	-	96	41.969	ENSLAFG00000000721	AICDA	97	41.969

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000008890	-	91	52.941	ENSG00000239713	APOBEC3G	97	52.941	Homo_sapiens
ENSLAFG00000008890	-	89	48.936	ENSAMEG00000010815	-	88	47.525	Ailuropoda_melanoleuca
ENSLAFG00000008890	-	90	52.660	ENSANAG00000020573	-	94	52.660	Aotus_nancymaae
ENSLAFG00000008890	-	95	51.872	ENSANAG00000031271	APOBEC3G	97	51.872	Aotus_nancymaae
ENSLAFG00000008890	-	88	46.061	ENSANAG00000027961	-	99	46.061	Aotus_nancymaae
ENSLAFG00000008890	-	95	46.995	ENSANAG00000028416	-	96	46.995	Aotus_nancymaae
ENSLAFG00000008890	-	90	44.385	ENSBTAG00000037800	-	99	44.385	Bos_taurus
ENSLAFG00000008890	-	87	53.005	ENSCJAG00000011578	-	74	53.005	Callithrix_jacchus
ENSLAFG00000008890	-	94	50.000	ENSCJAG00000023368	APOBEC3G	97	50.000	Callithrix_jacchus
ENSLAFG00000008890	-	96	41.346	ENSCAFG00000015211	-	98	41.346	Canis_familiaris
ENSLAFG00000008890	-	63	52.000	ENSCAFG00000023589	-	89	52.000	Canis_familiaris
ENSLAFG00000008890	-	90	46.409	ENSCAFG00020002661	-	82	42.708	Canis_lupus_dingo
ENSLAFG00000008890	-	91	43.005	ENSCAFG00020002641	-	82	44.560	Canis_lupus_dingo
ENSLAFG00000008890	-	90	43.316	ENSCHIG00000012694	-	91	43.243	Capra_hircus
ENSLAFG00000008890	-	90	52.660	ENSCCAG00000030928	-	91	52.660	Cebus_capucinus
ENSLAFG00000008890	-	95	51.701	ENSCCAG00000033147	-	93	51.596	Cebus_capucinus
ENSLAFG00000008890	-	90	43.850	ENSCCAG00000032509	-	98	43.850	Cebus_capucinus
ENSLAFG00000008890	-	94	48.913	ENSCCAG00000032232	-	96	48.913	Cebus_capucinus
ENSLAFG00000008890	-	91	50.920	ENSCSAG00000006376	APOBEC3G	85	50.920	Chlorocebus_sabaeus
ENSLAFG00000008890	-	95	42.105	ENSCANG00000029968	-	73	42.105	Colobus_angolensis_palliatus
ENSLAFG00000008890	-	85	38.372	ENSDNOG00000039749	-	76	38.372	Dasypus_novemcinctus
ENSLAFG00000008890	-	91	52.910	ENSEASG00005018643	-	81	52.910	Equus_asinus_asinus
ENSLAFG00000008890	-	91	52.381	ENSECAG00000022371	APOBEC3Z1B	83	52.381	Equus_caballus
ENSLAFG00000008890	-	95	50.769	ENSECAG00000032756	-	67	50.769	Equus_caballus
ENSLAFG00000008890	-	91	51.429	ENSGGOG00000013750	APOBEC3G	96	51.429	Gorilla_gorilla
ENSLAFG00000008890	-	96	52.020	ENSMFAG00000044711	APOBEC3G	87	52.020	Macaca_fascicularis
ENSLAFG00000008890	-	96	53.439	ENSMMUG00000039346	APOBEC3G	95	53.005	Macaca_mulatta
ENSLAFG00000008890	-	96	53.439	ENSMNEG00000038847	APOBEC3G	93	53.439	Macaca_nemestrina
ENSLAFG00000008890	-	97	48.309	ENSMLEG00000024444	APOBEC3G	97	48.309	Mandrillus_leucophaeus
ENSLAFG00000008890	-	88	53.261	ENSMICG00000043748	-	91	53.261	Microcebus_murinus
ENSLAFG00000008890	-	88	49.457	ENSMICG00000047191	-	98	49.457	Microcebus_murinus
ENSLAFG00000008890	-	88	50.000	ENSMPUG00000013235	-	93	50.000	Mustela_putorius_furo
ENSLAFG00000008890	-	95	50.345	ENSMLUG00000008631	-	100	50.345	Myotis_lucifugus
ENSLAFG00000008890	-	90	45.989	ENSMLUG00000024957	-	96	43.750	Myotis_lucifugus
ENSLAFG00000008890	-	85	43.429	ENSMLUG00000026771	-	76	43.429	Myotis_lucifugus
ENSLAFG00000008890	-	91	50.376	ENSMLUG00000024853	-	99	50.376	Myotis_lucifugus
ENSLAFG00000008890	-	90	47.594	ENSMLUG00000023022	-	94	45.673	Myotis_lucifugus
ENSLAFG00000008890	-	92	48.087	ENSMLUG00000000977	-	95	48.087	Myotis_lucifugus
ENSLAFG00000008890	-	88	46.524	ENSMLUG00000014565	-	98	46.524	Myotis_lucifugus
ENSLAFG00000008890	-	54	49.074	ENSMLUG00000022226	-	90	46.281	Myotis_lucifugus
ENSLAFG00000008890	-	87	45.000	ENSMLUG00000000517	-	100	45.000	Myotis_lucifugus
ENSLAFG00000008890	-	90	41.935	ENSMLUG00000028652	-	84	41.117	Myotis_lucifugus
ENSLAFG00000008890	-	82	50.909	ENSNLEG00000018922	-	97	50.909	Nomascus_leucogenys
ENSLAFG00000008890	-	88	48.315	ENSOPRG00000002326	-	98	48.315	Ochotona_princeps
ENSLAFG00000008890	-	79	52.410	ENSOCUG00000023532	-	64	52.410	Oryctolagus_cuniculus
ENSLAFG00000008890	-	90	51.562	ENSOGAG00000024822	-	94	51.562	Otolemur_garnettii
ENSLAFG00000008890	-	96	54.545	ENSOGAG00000032518	-	98	54.545	Otolemur_garnettii
ENSLAFG00000008890	-	90	44.681	ENSOARG00000016213	APOBEC3Z1	99	44.681	Ovis_aries
ENSLAFG00000008890	-	90	53.191	ENSPPAG00000033277	-	87	53.191	Pan_paniscus
ENSLAFG00000008890	-	91	52.941	ENSPTRG00000014387	APOBEC3G	97	52.941	Pan_troglodytes
ENSLAFG00000008890	-	90	52.941	ENSPPYG00000011833	APOBEC3G	90	52.941	Pongo_abelii
ENSLAFG00000008890	-	63	61.600	ENSPCAG00000001848	-	91	61.600	Procavia_capensis
ENSLAFG00000008890	-	90	51.872	ENSPCAG00000015518	-	78	48.529	Procavia_capensis
ENSLAFG00000008890	-	83	51.462	ENSPCOG00000016357	-	85	51.462	Propithecus_coquereli
ENSLAFG00000008890	-	90	49.468	ENSPVAG00000004045	-	94	49.468	Pteropus_vampyrus
ENSLAFG00000008890	-	96	50.794	ENSRBIG00000035436	APOBEC3G	91	50.794	Rhinopithecus_bieti
ENSLAFG00000008890	-	90	52.660	ENSSBOG00000021384	-	92	52.660	Saimiri_boliviensis_boliviensis
ENSLAFG00000008890	-	95	50.267	ENSSBOG00000026566	-	97	50.267	Saimiri_boliviensis_boliviensis
ENSLAFG00000008890	-	90	52.406	ENSSBOG00000029091	-	91	52.406	Saimiri_boliviensis_boliviensis
ENSLAFG00000008890	-	90	51.337	ENSSBOG00000018208	-	99	51.337	Saimiri_boliviensis_boliviensis
ENSLAFG00000008890	-	93	50.000	ENSSBOG00000023468	-	79	50.000	Saimiri_boliviensis_boliviensis
ENSLAFG00000008890	-	88	50.000	ENSSBOG00000025673	-	85	50.000	Saimiri_boliviensis_boliviensis
ENSLAFG00000008890	-	83	49.123	ENSTTRG00000009395	-	86	49.123	Tursiops_truncatus
ENSLAFG00000008890	-	88	50.829	ENSUMAG00000002249	-	87	50.829	Ursus_maritimus
ENSLAFG00000008890	-	90	48.947	ENSUMAG00000014447	-	94	48.947	Ursus_maritimus