EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000009299 (Gene tree)
Gene ID: -
Gene Symbol: SNAI2
Alias: SLUG|SLUGH|SLUGH1|SNAIL2
Full Name: snail family transcriptional repressor 2
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 2396 bases
Position: chrscaffold_106:1124902-1127297
Accession: 100676272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000007793	zf-C2H2	PF00096.26	7.9e-28	1	5
ENSLAFP00000007793	zf-C2H2	PF00096.26	7.9e-28	2	5
ENSLAFP00000007793	zf-C2H2	PF00096.26	7.9e-28	3	5
ENSLAFP00000007793	zf-C2H2	PF00096.26	7.9e-28	4	5
ENSLAFP00000007793	zf-C2H2	PF00096.26	7.9e-28	5	5
ENSLAFP00000007793	zf-met	PF12874.7	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000009298	SNAI2-201	807	-	ENSLAFP00000007793	268 (aa)	XP_003421125	G3T3G9

Gene Model

Click here to download ENSLAFG00000009299's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000009299's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000009299	SNAI2	56	41.284	ENSLAFG00000002909	-	80	41.284
ENSLAFG00000009299	SNAI2	50	36.986	ENSLAFG00000008686	-	81	33.333
ENSLAFG00000009299	SNAI2	56	35.714	ENSLAFG00000032716	-	99	34.146
ENSLAFG00000009299	SNAI2	51	38.686	ENSLAFG00000011022	ZFP69B	60	38.686
ENSLAFG00000009299	SNAI2	99	53.480	ENSLAFG00000030265	SNAI1	98	53.497
ENSLAFG00000009299	SNAI2	57	36.029	ENSLAFG00000002266	ZNF319	75	35.821
ENSLAFG00000009299	SNAI2	60	37.662	ENSLAFG00000013445	ZNF521	92	36.364
ENSLAFG00000009299	SNAI2	66	38.060	ENSLAFG00000014451	-	80	38.060
ENSLAFG00000009299	SNAI2	57	37.313	ENSLAFG00000022290	ZNF668	86	37.313
ENSLAFG00000009299	SNAI2	53	43.689	ENSLAFG00000007752	-	92	43.200
ENSLAFG00000009299	SNAI2	77	39.855	ENSLAFG00000031653	-	100	41.558
ENSLAFG00000009299	SNAI2	54	39.048	ENSLAFG00000000308	ZNF574	56	39.048
ENSLAFG00000009299	SNAI2	99	57.565	ENSLAFG00000005117	SNAI3	99	57.565
ENSLAFG00000009299	SNAI2	54	40.964	ENSLAFG00000022960	ZFP64	59	40.964
ENSLAFG00000009299	SNAI2	60	41.606	ENSLAFG00000006532	PRDM5	87	40.876
ENSLAFG00000009299	SNAI2	65	47.917	ENSLAFG00000030700	ZNF865	99	41.892
ENSLAFG00000009299	SNAI2	66	44.444	ENSLAFG00000029320	ZNF784	58	44.444
ENSLAFG00000009299	SNAI2	51	40.000	ENSLAFG00000011186	ZNF235	73	40.000
ENSLAFG00000009299	SNAI2	63	41.096	ENSLAFG00000012902	ZBTB41	50	36.232
ENSLAFG00000009299	SNAI2	52	44.231	ENSLAFG00000003125	ZFP1	60	44.231
ENSLAFG00000009299	SNAI2	50	38.806	ENSLAFG00000006959	ZNF2	58	38.806
ENSLAFG00000009299	SNAI2	52	40.299	ENSLAFG00000002806	ZNF317	64	40.299
ENSLAFG00000009299	SNAI2	66	33.898	ENSLAFG00000022367	GFI1B	50	34.906
ENSLAFG00000009299	SNAI2	62	34.815	ENSLAFG00000022529	ZNF628	100	34.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000009299	SNAI2	99	48.980	ENSG00000185669	SNAI3	99	48.845	Homo_sapiens
ENSLAFG00000009299	SNAI2	100	96.269	ENSG00000019549	SNAI2	100	96.269	Homo_sapiens
ENSLAFG00000009299	SNAI2	100	97.761	ENSAMEG00000009606	SNAI2	100	97.761	Ailuropoda_melanoleuca
ENSLAFG00000009299	SNAI2	99	45.928	ENSANAG00000032748	SNAI3	99	45.603	Aotus_nancymaae
ENSLAFG00000009299	SNAI2	100	95.522	ENSANAG00000021163	SNAI2	100	95.522	Aotus_nancymaae
ENSLAFG00000009299	SNAI2	99	46.259	ENSBTAG00000017528	SNAI3	99	45.033	Bos_taurus
ENSLAFG00000009299	SNAI2	100	92.164	ENSBTAG00000013227	SNAI2	100	92.164	Bos_taurus
ENSLAFG00000009299	SNAI2	100	96.269	ENSCJAG00000013499	SNAI2	100	96.269	Callithrix_jacchus
ENSLAFG00000009299	SNAI2	99	47.079	ENSCAFG00000029458	SNAI3	99	46.918	Canis_familiaris
ENSLAFG00000009299	SNAI2	100	97.015	ENSCAFG00000006638	SNAI2	100	97.015	Canis_familiaris
ENSLAFG00000009299	SNAI2	100	97.015	ENSCAFG00020015384	SNAI2	100	97.015	Canis_lupus_dingo
ENSLAFG00000009299	SNAI2	99	47.423	ENSCAFG00020004719	SNAI3	99	47.260	Canis_lupus_dingo
ENSLAFG00000009299	SNAI2	100	91.791	ENSCHIG00000024410	SNAI2	100	91.791	Capra_hircus
ENSLAFG00000009299	SNAI2	99	45.695	ENSCHIG00000018087	SNAI3	99	45.791	Capra_hircus
ENSLAFG00000009299	SNAI2	53	72.000	ENSTSYG00000025594	SNAI3	52	72.000	Carlito_syrichta
ENSLAFG00000009299	SNAI2	90	95.851	ENSTSYG00000030892	SNAI2	90	95.851	Carlito_syrichta
ENSLAFG00000009299	SNAI2	83	95.067	ENSCAPG00000013078	SNAI2	100	95.067	Cavia_aperea
ENSLAFG00000009299	SNAI2	100	96.269	ENSCCAG00000024100	SNAI2	100	96.269	Cebus_capucinus
ENSLAFG00000009299	SNAI2	99	46.906	ENSCATG00000031714	SNAI3	99	46.906	Cercocebus_atys
ENSLAFG00000009299	SNAI2	100	96.269	ENSCATG00000028656	SNAI2	100	96.269	Cercocebus_atys
ENSLAFG00000009299	SNAI2	100	96.269	ENSCLAG00000011797	SNAI2	100	96.269	Chinchilla_lanigera
ENSLAFG00000009299	SNAI2	100	96.269	ENSCSAG00000014787	SNAI2	100	96.269	Chlorocebus_sabaeus
ENSLAFG00000009299	SNAI2	99	53.535	ENSCPBG00000023474	SNAI3	99	53.199	Chrysemys_picta_bellii
ENSLAFG00000009299	SNAI2	100	95.896	ENSCPBG00000020255	SNAI2	100	95.896	Chrysemys_picta_bellii
ENSLAFG00000009299	SNAI2	59	58.599	ENSCSAVG00000009819	-	81	58.599	Ciona_savignyi
ENSLAFG00000009299	SNAI2	100	96.269	ENSCANG00000029656	SNAI2	100	96.269	Colobus_angolensis_palliatus
ENSLAFG00000009299	SNAI2	100	95.522	ENSCGRG00001013674	Snai2	100	95.522	Cricetulus_griseus_chok1gshd
ENSLAFG00000009299	SNAI2	99	46.367	ENSCGRG00001011389	Snai3	99	46.367	Cricetulus_griseus_chok1gshd
ENSLAFG00000009299	SNAI2	100	95.522	ENSCGRG00000012119	Snai2	100	95.522	Cricetulus_griseus_crigri
ENSLAFG00000009299	SNAI2	99	46.367	ENSCGRG00000014932	Snai3	99	46.367	Cricetulus_griseus_crigri
ENSLAFG00000009299	SNAI2	78	36.199	ENSDNOG00000035204	-	100	35.000	Dasypus_novemcinctus
ENSLAFG00000009299	SNAI2	100	94.776	ENSDORG00000029620	Snai2	100	94.776	Dipodomys_ordii
ENSLAFG00000009299	SNAI2	99	47.297	ENSECAG00000012131	SNAI3	99	46.689	Equus_caballus
ENSLAFG00000009299	SNAI2	100	82.090	ENSELUG00000021795	SNAI2	79	80.970	Esox_lucius
ENSLAFG00000009299	SNAI2	99	57.292	ENSELUG00000018742	-	99	55.903	Esox_lucius
ENSLAFG00000009299	SNAI2	99	45.290	ENSFCAG00000043885	SNAI3	99	45.848	Felis_catus
ENSLAFG00000009299	SNAI2	89	63.866	ENSFALG00000012974	-	98	65.690	Ficedula_albicollis
ENSLAFG00000009299	SNAI2	100	97.015	ENSFDAG00000016958	SNAI2	100	97.015	Fukomys_damarensis
ENSLAFG00000009299	SNAI2	100	95.896	ENSGAGG00000000426	SNAI2	100	95.896	Gopherus_agassizii
ENSLAFG00000009299	SNAI2	99	52.862	ENSGAGG00000023571	SNAI3	99	53.220	Gopherus_agassizii
ENSLAFG00000009299	SNAI2	99	47.855	ENSGGOG00000012559	SNAI3	99	45.277	Gorilla_gorilla
ENSLAFG00000009299	SNAI2	100	96.269	ENSGGOG00000000959	SNAI2	100	96.269	Gorilla_gorilla
ENSLAFG00000009299	SNAI2	100	75.093	ENSHCOG00000019435	SNAI2	100	75.093	Hippocampus_comes
ENSLAFG00000009299	SNAI2	100	70.896	ENSIPUG00000000131	snai2	100	70.522	Ictalurus_punctatus
ENSLAFG00000009299	SNAI2	100	97.388	ENSSTOG00000028743	SNAI2	100	97.388	Ictidomys_tridecemlineatus
ENSLAFG00000009299	SNAI2	99	47.099	ENSJJAG00000019934	Snai3	99	45.659	Jaculus_jaculus
ENSLAFG00000009299	SNAI2	100	87.687	ENSLOCG00000005992	SNAI2	100	87.687	Lepisosteus_oculatus
ENSLAFG00000009299	SNAI2	52	86.429	ENSLOCG00000004887	SNAI3	92	83.444	Lepisosteus_oculatus
ENSLAFG00000009299	SNAI2	100	96.269	ENSMFAG00000046061	SNAI2	100	96.269	Macaca_fascicularis
ENSLAFG00000009299	SNAI2	99	49.835	ENSMFAG00000032064	SNAI3	99	47.727	Macaca_fascicularis
ENSLAFG00000009299	SNAI2	100	96.269	ENSMMUG00000016195	SNAI2	100	96.269	Macaca_mulatta
ENSLAFG00000009299	SNAI2	99	49.835	ENSMMUG00000008716	SNAI3	99	47.727	Macaca_mulatta
ENSLAFG00000009299	SNAI2	99	50.165	ENSMNEG00000045515	SNAI3	99	48.701	Macaca_nemestrina
ENSLAFG00000009299	SNAI2	100	96.269	ENSMNEG00000034216	SNAI2	100	96.269	Macaca_nemestrina
ENSLAFG00000009299	SNAI2	100	96.269	ENSMLEG00000034407	SNAI2	100	96.269	Mandrillus_leucophaeus
ENSLAFG00000009299	SNAI2	85	54.430	ENSMLEG00000033191	SNAI3	75	54.430	Mandrillus_leucophaeus
ENSLAFG00000009299	SNAI2	100	95.149	ENSMAUG00000008119	Snai2	100	95.149	Mesocricetus_auratus
ENSLAFG00000009299	SNAI2	100	95.149	ENSMOCG00000006622	Snai2	100	95.149	Microtus_ochrogaster
ENSLAFG00000009299	SNAI2	100	96.642	ENSMODG00000010173	SNAI2	100	96.642	Monodelphis_domestica
ENSLAFG00000009299	SNAI2	100	94.424	MGP_CAROLIEiJ_G0020483	Snai2	100	94.424	Mus_caroli
ENSLAFG00000009299	SNAI2	100	93.680	ENSMUSG00000022676	Snai2	100	93.680	Mus_musculus
ENSLAFG00000009299	SNAI2	100	94.424	MGP_PahariEiJ_G0016188	Snai2	100	94.424	Mus_pahari
ENSLAFG00000009299	SNAI2	99	46.575	MGP_PahariEiJ_G0023260	Snai3	99	46.207	Mus_pahari
ENSLAFG00000009299	SNAI2	100	94.052	MGP_SPRETEiJ_G0021379	Snai2	100	94.052	Mus_spretus
ENSLAFG00000009299	SNAI2	100	97.761	ENSMPUG00000010793	SNAI2	100	97.761	Mustela_putorius_furo
ENSLAFG00000009299	SNAI2	99	48.958	ENSMPUG00000008104	SNAI3	99	45.955	Mustela_putorius_furo
ENSLAFG00000009299	SNAI2	100	95.522	ENSMLUG00000001086	SNAI2	100	95.522	Myotis_lucifugus
ENSLAFG00000009299	SNAI2	99	46.128	ENSNGAG00000023039	Snai3	99	47.315	Nannospalax_galili
ENSLAFG00000009299	SNAI2	99	48.515	ENSNLEG00000000595	SNAI3	99	45.277	Nomascus_leucogenys
ENSLAFG00000009299	SNAI2	100	96.269	ENSNLEG00000013421	SNAI2	100	96.269	Nomascus_leucogenys
ENSLAFG00000009299	SNAI2	97	96.552	ENSMEUG00000009510	SNAI2	100	96.552	Notamacropus_eugenii
ENSLAFG00000009299	SNAI2	100	96.269	ENSOANG00000007267	SNAI2	100	96.269	Ornithorhynchus_anatinus
ENSLAFG00000009299	SNAI2	99	48.123	ENSOGAG00000000419	SNAI3	99	45.928	Otolemur_garnettii
ENSLAFG00000009299	SNAI2	100	91.791	ENSOARG00000013030	SNAI2	100	91.791	Ovis_aries
ENSLAFG00000009299	SNAI2	99	48.639	ENSPPAG00000043301	SNAI3	99	45.277	Pan_paniscus
ENSLAFG00000009299	SNAI2	100	96.269	ENSPPAG00000015662	SNAI2	100	96.269	Pan_paniscus
ENSLAFG00000009299	SNAI2	100	97.015	ENSPPRG00000012562	-	100	97.015	Panthera_pardus
ENSLAFG00000009299	SNAI2	99	46.014	ENSPPRG00000008511	SNAI3	99	46.209	Panthera_pardus
ENSLAFG00000009299	SNAI2	90	96.694	ENSPTIG00000007593	SNAI2	77	96.694	Panthera_tigris_altaica
ENSLAFG00000009299	SNAI2	99	48.980	ENSPTRG00000008460	SNAI3	99	45.603	Pan_troglodytes
ENSLAFG00000009299	SNAI2	100	96.269	ENSPTRG00000020235	SNAI2	100	96.269	Pan_troglodytes
ENSLAFG00000009299	SNAI2	100	96.269	ENSPANG00000017540	SNAI2	100	96.269	Papio_anubis
ENSLAFG00000009299	SNAI2	99	47.231	ENSPANG00000000509	SNAI3	99	47.231	Papio_anubis
ENSLAFG00000009299	SNAI2	100	85.821	ENSPKIG00000002254	SNAI2	100	85.821	Paramormyrops_kingsleyae
ENSLAFG00000009299	SNAI2	99	55.017	ENSPKIG00000007872	SNAI3	99	54.325	Paramormyrops_kingsleyae
ENSLAFG00000009299	SNAI2	86	57.447	ENSPSIG00000004262	SNAI3	56	80.986	Pelodiscus_sinensis
ENSLAFG00000009299	SNAI2	100	95.522	ENSPSIG00000016395	SNAI2	100	95.522	Pelodiscus_sinensis
ENSLAFG00000009299	SNAI2	100	79.104	ENSPMGG00000013179	SNAI2	100	77.612	Periophthalmus_magnuspinnatus
ENSLAFG00000009299	SNAI2	100	95.149	ENSPEMG00000011739	Snai2	100	95.149	Peromyscus_maniculatus_bairdii
ENSLAFG00000009299	SNAI2	100	97.015	ENSPCIG00000025156	SNAI2	100	97.015	Phascolarctos_cinereus
ENSLAFG00000009299	SNAI2	90	80.165	ENSPREG00000008528	SNAI2	86	78.512	Poecilia_reticulata
ENSLAFG00000009299	SNAI2	99	48.845	ENSPPYG00000007643	SNAI3	99	49.007	Pongo_abelii
ENSLAFG00000009299	SNAI2	100	96.269	ENSPPYG00000018578	SNAI2	100	96.269	Pongo_abelii
ENSLAFG00000009299	SNAI2	100	97.761	ENSPCOG00000015656	SNAI2	100	97.761	Propithecus_coquereli
ENSLAFG00000009299	SNAI2	100	96.269	ENSPVAG00000009457	SNAI2	100	96.269	Pteropus_vampyrus
ENSLAFG00000009299	SNAI2	99	45.548	ENSRNOG00000013586	Snai3	99	46.392	Rattus_norvegicus
ENSLAFG00000009299	SNAI2	99	49.835	ENSRBIG00000025770	SNAI3	99	49.026	Rhinopithecus_bieti
ENSLAFG00000009299	SNAI2	100	96.269	ENSRBIG00000041133	SNAI2	100	96.269	Rhinopithecus_bieti
ENSLAFG00000009299	SNAI2	100	96.269	ENSRROG00000032273	SNAI2	100	96.269	Rhinopithecus_roxellana
ENSLAFG00000009299	SNAI2	99	48.701	ENSRROG00000032757	SNAI3	99	49.175	Rhinopithecus_roxellana
ENSLAFG00000009299	SNAI2	100	96.269	ENSSBOG00000035774	SNAI2	100	96.269	Saimiri_boliviensis_boliviensis
ENSLAFG00000009299	SNAI2	100	97.015	ENSSHAG00000004205	SNAI2	100	97.015	Sarcophilus_harrisii
ENSLAFG00000009299	SNAI2	99	50.498	ENSSFOG00015016115	snai3	93	49.669	Scleropages_formosus
ENSLAFG00000009299	SNAI2	100	85.185	ENSSFOG00015018025	SNAI2	100	85.185	Scleropages_formosus
ENSLAFG00000009299	SNAI2	100	95.149	ENSSPUG00000005427	-	100	95.149	Sphenodon_punctatus
ENSLAFG00000009299	SNAI2	100	94.776	ENSSSCG00000039568	SNAI2	100	94.776	Sus_scrofa
ENSLAFG00000009299	SNAI2	86	97.391	ENSUAMG00000014942	SNAI2	100	97.391	Ursus_americanus
ENSLAFG00000009299	SNAI2	99	50.519	ENSUAMG00000020030	SNAI3	99	48.675	Ursus_americanus
ENSLAFG00000009299	SNAI2	98	97.338	ENSUMAG00000006525	SNAI2	100	97.338	Ursus_maritimus
ENSLAFG00000009299	SNAI2	100	97.388	ENSVVUG00000017625	SNAI2	100	97.388	Vulpes_vulpes
ENSLAFG00000009299	SNAI2	99	48.797	ENSVVUG00000003233	SNAI3	99	48.454	Vulpes_vulpes
ENSLAFG00000009299	SNAI2	100	88.806	ENSXETG00000024006	snai2	100	88.806	Xenopus_tropicalis