EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000009326 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 36197 bases
Position: chrscaffold_39:15871347-15907543
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000007817	zf-CCCH	PF00642.24	7.6e-13	1	2
ENSLAFP00000007817	zf-CCCH	PF00642.24	7.6e-13	2	2
ENSLAFP00000007817	RRM_1	PF00076.22	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000009326	-	1338	-	ENSLAFP00000007817	446 (aa)	-	G3T3I4

Gene Model

Click here to download ENSLAFG00000009326's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000009326's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000009326	-	89	70.250	ENSLAFG00000018654	-	88	69.674

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000009326	-	91	82.759	ENSG00000169249	ZRSR2	83	82.663	Homo_sapiens
ENSLAFG00000009326	-	80	54.848	ENSAPOG00000004712	zrsr2	78	64.390	Acanthochromis_polyacanthus
ENSLAFG00000009326	-	89	82.793	ENSAMEG00000017716	ZRSR2	85	80.050	Ailuropoda_melanoleuca
ENSLAFG00000009326	-	52	64.135	ENSACIG00000004601	zrsr2	64	55.763	Amphilophus_citrinellus
ENSLAFG00000009326	-	92	64.407	ENSACAG00000017034	ZRSR2	85	66.751	Anolis_carolinensis
ENSLAFG00000009326	-	89	83.333	ENSANAG00000019297	ZRSR2	84	82.915	Aotus_nancymaae
ENSLAFG00000009326	-	80	56.183	ENSACLG00000019635	zrsr2	51	64.286	Astatotilapia_calliptera
ENSLAFG00000009326	-	89	83.586	ENSCJAG00000047941	ZRSR2	84	83.166	Callithrix_jacchus
ENSLAFG00000009326	-	90	82.426	ENSCAFG00000012201	ZRSR2	87	79.699	Canis_familiaris
ENSLAFG00000009326	-	78	65.057	ENSCAFG00020016674	-	83	57.985	Canis_lupus_dingo
ENSLAFG00000009326	-	79	75.284	ENSCHIG00000023069	-	82	77.460	Capra_hircus
ENSLAFG00000009326	-	88	74.112	ENSCHIG00000024109	-	92	74.112	Capra_hircus
ENSLAFG00000009326	-	54	82.869	ENSTSYG00000005278	-	77	82.731	Carlito_syrichta
ENSLAFG00000009326	-	92	78.049	ENSCPOG00000004227	ZRSR2	89	79.040	Cavia_porcellus
ENSLAFG00000009326	-	89	83.333	ENSCCAG00000023937	ZRSR2	84	82.915	Cebus_capucinus
ENSLAFG00000009326	-	92	73.882	ENSCATG00000020687	-	82	75.439	Cercocebus_atys
ENSLAFG00000009326	-	91	83.251	ENSCATG00000034085	ZRSR2	83	83.166	Cercocebus_atys
ENSLAFG00000009326	-	73	84.615	ENSCLAG00000002087	ZRSR2	86	86.581	Chinchilla_lanigera
ENSLAFG00000009326	-	91	82.843	ENSCSAG00000014897	ZRSR2	83	82.750	Chlorocebus_sabaeus
ENSLAFG00000009326	-	90	58.313	ENSCHOG00000007907	ZRSR2	86	58.291	Choloepus_hoffmanni
ENSLAFG00000009326	-	92	74.341	ENSCANG00000030333	ZRSR2	63	89.324	Colobus_angolensis_palliatus
ENSLAFG00000009326	-	94	69.048	ENSCGRG00001007132	Zrsr1	96	67.619	Cricetulus_griseus_chok1gshd
ENSLAFG00000009326	-	92	79.612	ENSCGRG00001006948	-	78	80.000	Cricetulus_griseus_chok1gshd
ENSLAFG00000009326	-	94	69.048	ENSCGRG00000019269	Zrsr1	96	67.619	Cricetulus_griseus_crigri
ENSLAFG00000009326	-	92	78.502	ENSCGRG00000009725	-	83	79.052	Cricetulus_griseus_crigri
ENSLAFG00000009326	-	91	58.416	ENSCSEG00000009682	zrsr2	50	68.276	Cynoglossus_semilaevis
ENSLAFG00000009326	-	52	32.328	ENSCSEG00000001122	-	88	35.294	Cynoglossus_semilaevis
ENSLAFG00000009326	-	56	70.281	ENSCVAG00000020877	zrsr2	56	61.538	Cyprinodon_variegatus
ENSLAFG00000009326	-	86	83.029	ENSDNOG00000015008	ZRSR2	77	89.416	Dasypus_novemcinctus
ENSLAFG00000009326	-	92	71.707	ENSETEG00000005141	-	86	71.465	Echinops_telfairi
ENSLAFG00000009326	-	55	88.306	ENSECAG00000006454	ZRSR2	81	88.306	Equus_caballus
ENSLAFG00000009326	-	89	79.250	ENSEEUG00000002115	ZRSR2	84	77.945	Erinaceus_europaeus
ENSLAFG00000009326	-	89	78.750	ENSFCAG00000025255	-	82	76.500	Felis_catus
ENSLAFG00000009326	-	89	83.709	ENSFCAG00000009333	-	86	81.203	Felis_catus
ENSLAFG00000009326	-	86	68.299	ENSFALG00000004373	ZRSR2	83	66.583	Ficedula_albicollis
ENSLAFG00000009326	-	89	81.203	ENSFDAG00000011766	ZRSR2	84	81.203	Fukomys_damarensis
ENSLAFG00000009326	-	58	76.744	ENSGALG00000016552	ZRSR2	80	75.000	Gallus_gallus
ENSLAFG00000009326	-	53	32.917	ENSGAFG00000018812	-	87	35.294	Gambusia_affinis
ENSLAFG00000009326	-	85	63.517	ENSGAGG00000016402	ZRSR2	83	63.636	Gopherus_agassizii
ENSLAFG00000009326	-	91	83.251	ENSGGOG00000011962	ZRSR2	83	83.166	Gorilla_gorilla
ENSLAFG00000009326	-	85	56.397	ENSGGOG00000025707	-	82	54.396	Gorilla_gorilla
ENSLAFG00000009326	-	89	80.702	ENSHGLG00000003790	ZRSR2	86	79.950	Heterocephalus_glaber_female
ENSLAFG00000009326	-	89	80.702	ENSHGLG00100010131	ZRSR2	85	79.950	Heterocephalus_glaber_male
ENSLAFG00000009326	-	84	55.764	ENSIPUG00000012642	zrsr2	72	65.201	Ictalurus_punctatus
ENSLAFG00000009326	-	92	79.469	ENSSTOG00000008492	ZRSR2	86	82.090	Ictidomys_tridecemlineatus
ENSLAFG00000009326	-	65	85.813	ENSJJAG00000020365	-	82	79.397	Jaculus_jaculus
ENSLAFG00000009326	-	52	32.328	ENSKMAG00000000639	-	88	35.784	Kryptolebias_marmoratus
ENSLAFG00000009326	-	63	64.311	ENSLBEG00000024627	zrsr2	58	60.256	Labrus_bergylta
ENSLAFG00000009326	-	85	64.136	ENSLACG00000013483	ZRSR2	64	63.706	Latimeria_chalumnae
ENSLAFG00000009326	-	59	66.920	ENSLOCG00000007427	zrsr2	73	60.204	Lepisosteus_oculatus
ENSLAFG00000009326	-	92	83.415	ENSMFAG00000039674	ZRSR2	83	83.166	Macaca_fascicularis
ENSLAFG00000009326	-	51	31.330	ENSMNEG00000037977	-	86	31.754	Macaca_nemestrina
ENSLAFG00000009326	-	92	83.415	ENSMNEG00000043293	ZRSR2	83	83.166	Macaca_nemestrina
ENSLAFG00000009326	-	91	78.079	ENSMLEG00000028125	ZRSR2	81	76.884	Mandrillus_leucophaeus
ENSLAFG00000009326	-	86	55.362	ENSMAMG00000010779	zrsr2	57	58.430	Mastacembelus_armatus
ENSLAFG00000009326	-	85	68.653	ENSMGAG00000014689	ZRSR2	83	66.414	Meleagris_gallopavo
ENSLAFG00000009326	-	90	78.055	ENSMAUG00000009754	-	94	70.179	Mesocricetus_auratus
ENSLAFG00000009326	-	89	84.211	ENSMICG00000003211	ZRSR2	84	84.211	Microcebus_murinus
ENSLAFG00000009326	-	92	77.670	ENSMOCG00000011340	-	87	78.000	Microtus_ochrogaster
ENSLAFG00000009326	-	63	58.537	ENSMMOG00000018572	zrsr2	65	58.703	Mola_mola
ENSLAFG00000009326	-	66	74.830	ENSMODG00000017202	ZRSR2	85	66.667	Monodelphis_domestica
ENSLAFG00000009326	-	67	53.659	ENSMALG00000013132	zrsr2	58	54.114	Monopterus_albus
ENSLAFG00000009326	-	87	70.984	MGP_CAROLIEiJ_G0016133	Zrsr1	76	77.246	Mus_caroli
ENSLAFG00000009326	-	87	70.207	ENSMUSG00000044068	Zrsr1	76	76.347	Mus_musculus
ENSLAFG00000009326	-	87	70.725	MGP_PahariEiJ_G0016759	Zrsr1	76	76.946	Mus_pahari
ENSLAFG00000009326	-	87	70.207	MGP_SPRETEiJ_G0016976	Zrsr1	76	76.347	Mus_spretus
ENSLAFG00000009326	-	89	80.952	ENSMPUG00000002739	ZRSR2	86	78.195	Mustela_putorius_furo
ENSLAFG00000009326	-	89	79.000	ENSMLUG00000009780	-	82	78.446	Myotis_lucifugus
ENSLAFG00000009326	-	64	56.491	ENSMLUG00000002201	-	61	56.940	Myotis_lucifugus
ENSLAFG00000009326	-	83	68.564	ENSNGAG00000011974	Zrsr1	95	67.313	Nannospalax_galili
ENSLAFG00000009326	-	92	79.319	ENSNGAG00000008809	-	83	79.899	Nannospalax_galili
ENSLAFG00000009326	-	73	58.610	ENSNBRG00000021146	zrsr2	51	64.643	Neolamprologus_brichardi
ENSLAFG00000009326	-	51	31.799	ENSNLEG00000011333	-	74	33.333	Nomascus_leucogenys
ENSLAFG00000009326	-	92	80.976	ENSNLEG00000018892	-	82	78.141	Nomascus_leucogenys
ENSLAFG00000009326	-	92	83.415	ENSNLEG00000009496	ZRSR2	83	83.166	Nomascus_leucogenys
ENSLAFG00000009326	-	92	82.238	ENSODEG00000004944	ZRSR2	83	81.203	Octodon_degus
ENSLAFG00000009326	-	77	58.333	ENSONIG00000000228	zrsr2	66	63.871	Oreochromis_niloticus
ENSLAFG00000009326	-	88	71.212	ENSOANG00000002571	ZRSR2	85	69.674	Ornithorhynchus_anatinus
ENSLAFG00000009326	-	92	81.884	ENSOCUG00000004295	ZRSR2	81	78.358	Oryctolagus_cuniculus
ENSLAFG00000009326	-	52	33.190	ENSORLG00000006182	-	87	35.784	Oryzias_latipes
ENSLAFG00000009326	-	51	31.441	ENSORLG00020014086	-	89	35.323	Oryzias_latipes_hni
ENSLAFG00000009326	-	92	79.903	ENSOGAG00000011340	-	90	79.551	Otolemur_garnettii
ENSLAFG00000009326	-	93	76.087	ENSOGAG00000031648	-	80	73.552	Otolemur_garnettii
ENSLAFG00000009326	-	92	79.024	ENSOGAG00000033259	-	81	77.945	Otolemur_garnettii
ENSLAFG00000009326	-	89	79.653	ENSOARG00000012713	ZRSR2	86	78.660	Ovis_aries
ENSLAFG00000009326	-	91	83.005	ENSPPAG00000022429	ZRSR2	83	82.915	Pan_paniscus
ENSLAFG00000009326	-	92	78.293	ENSPPAG00000008683	-	83	78.141	Pan_paniscus
ENSLAFG00000009326	-	89	79.000	ENSPPRG00000012485	-	85	76.500	Panthera_pardus
ENSLAFG00000009326	-	89	83.960	ENSPPRG00000016585	-	86	81.454	Panthera_pardus
ENSLAFG00000009326	-	89	78.750	ENSPTIG00000006398	-	85	76.250	Panthera_tigris_altaica
ENSLAFG00000009326	-	89	83.920	ENSPTIG00000016363	-	86	81.407	Panthera_tigris_altaica
ENSLAFG00000009326	-	80	61.838	ENSPTRG00000045685	-	80	59.557	Pan_troglodytes
ENSLAFG00000009326	-	91	83.251	ENSPTRG00000021693	ZRSR2	83	83.166	Pan_troglodytes
ENSLAFG00000009326	-	92	78.293	ENSPTRG00000017138	-	83	78.141	Pan_troglodytes
ENSLAFG00000009326	-	91	83.251	ENSPANG00000016331	ZRSR2	83	83.166	Papio_anubis
ENSLAFG00000009326	-	92	79.903	ENSPANG00000009346	-	82	78.803	Papio_anubis
ENSLAFG00000009326	-	86	68.448	ENSPSIG00000008915	ZRSR2	83	69.898	Pelodiscus_sinensis
ENSLAFG00000009326	-	76	55.652	ENSPMGG00000000771	zrsr2	52	60.967	Periophthalmus_magnuspinnatus
ENSLAFG00000009326	-	94	69.524	ENSPEMG00000013373	Zrsr1	96	69.286	Peromyscus_maniculatus_bairdii
ENSLAFG00000009326	-	79	51.676	ENSPMAG00000008152	zrsr2	75	51.676	Petromyzon_marinus
ENSLAFG00000009326	-	53	81.277	ENSPCIG00000000346	ZRSR2	88	75.862	Phascolarctos_cinereus
ENSLAFG00000009326	-	53	33.333	ENSPFOG00000011771	-	87	35.294	Poecilia_formosa
ENSLAFG00000009326	-	53	33.333	ENSPLAG00000024015	-	87	35.294	Poecilia_latipinna
ENSLAFG00000009326	-	53	33.333	ENSPMEG00000007991	-	87	35.294	Poecilia_mexicana
ENSLAFG00000009326	-	53	33.333	ENSPREG00000012953	-	87	35.294	Poecilia_reticulata
ENSLAFG00000009326	-	91	83.251	ENSPPYG00000020150	ZRSR2	83	83.166	Pongo_abelii
ENSLAFG00000009326	-	89	84.211	ENSPCOG00000027178	ZRSR2	84	84.211	Propithecus_coquereli
ENSLAFG00000009326	-	89	74.314	ENSPVAG00000010216	ZRSR2	86	71.712	Pteropus_vampyrus
ENSLAFG00000009326	-	80	56.452	ENSPNYG00000018426	zrsr2	51	64.643	Pundamilia_nyererei
ENSLAFG00000009326	-	54	72.083	ENSPNAG00000012282	zrsr2	50	72.453	Pygocentrus_nattereri
ENSLAFG00000009326	-	87	70.284	ENSRNOG00000009639	Zrsr1	76	75.749	Rattus_norvegicus
ENSLAFG00000009326	-	92	67.482	ENSRBIG00000033960	-	71	88.235	Rhinopithecus_bieti
ENSLAFG00000009326	-	92	63.043	ENSRBIG00000035472	ZRSR2	81	60.804	Rhinopithecus_bieti
ENSLAFG00000009326	-	92	69.927	ENSRROG00000041659	-	71	79.805	Rhinopithecus_roxellana
ENSLAFG00000009326	-	92	83.415	ENSRROG00000030588	ZRSR2	83	83.166	Rhinopithecus_roxellana
ENSLAFG00000009326	-	89	66.584	ENSSBOG00000017836	ZRSR2	82	65.578	Saimiri_boliviensis_boliviensis
ENSLAFG00000009326	-	87	73.196	ENSSHAG00000013271	ZRSR2	84	72.932	Sarcophilus_harrisii
ENSLAFG00000009326	-	86	63.613	ENSSPUG00000007432	ZRSR2	87	63.706	Sphenodon_punctatus
ENSLAFG00000009326	-	89	76.296	ENSSSCG00000030283	-	84	73.580	Sus_scrofa
ENSLAFG00000009326	-	59	71.004	ENSSSCG00000026864	-	98	65.789	Sus_scrofa
ENSLAFG00000009326	-	63	76.678	ENSTGUG00000007964	ZRSR2	85	67.005	Taeniopygia_guttata
ENSLAFG00000009326	-	70	83.387	ENSTBEG00000008533	ZRSR2	66	83.387	Tupaia_belangeri
ENSLAFG00000009326	-	55	89.113	ENSUAMG00000016637	ZRSR2	82	89.113	Ursus_americanus
ENSLAFG00000009326	-	55	89.113	ENSUMAG00000008698	ZRSR2	82	89.113	Ursus_maritimus
ENSLAFG00000009326	-	83	80.645	ENSVPAG00000007641	ZRSR2	70	86.859	Vicugna_pacos
ENSLAFG00000009326	-	73	66.055	ENSVVUG00000009615	-	72	62.997	Vulpes_vulpes
ENSLAFG00000009326	-	89	58.578	ENSXETG00000031542	ZRSR2	66	64.968	Xenopus_tropicalis
ENSLAFG00000009326	-	53	33.333	ENSXMAG00000008127	-	87	35.294	Xiphophorus_maculatus
ENSLAFG00000009326	-	73	56.098	ENSXMAG00000015258	zrsr2	58	53.279	Xiphophorus_maculatus