EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLAFG00000009412 (Gene tree)
Gene ID
-
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Loxodonta_africana
Status
putative
Strand
Plus strand
Length
20513 bases
Position
chrscaffold_70:4019267-4039779
Accession
7330
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLAFP00000019585RRM_1PF00076.221.5e-1912
ENSLAFP00000019585RRM_1PF00076.221.5e-1922
ENSLAFP00000007889RRM_1PF00076.224.8e-1912
ENSLAFP00000007889RRM_1PF00076.224.8e-1922
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLAFT00000009413MSI1-201993-ENSLAFP00000007889330 (aa)-G3T3P1
ENSLAFT00000027057MSI1-202906-ENSLAFP00000019585301 (aa)-G3TVH7
Gene Model
Click here to download ENSLAFG00000009412's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000009412's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLAFG00000009412MSI15230.573ENSLAFG00000029171-6232.402
ENSLAFG00000009412MSI15333.333ENSLAFG00000030769-7634.503
ENSLAFG00000009412MSI15337.736ENSLAFG00000016483HNRNPD8236.923
ENSLAFG00000009412MSI15537.791ENSLAFG00000006902HNRNPA2B16437.791
ENSLAFG00000009412MSI15340.491ENSLAFG00000008612HNRNPDL7238.462
ENSLAFG00000009412MSI15335.583ENSLAFG00000029587-6833.333
ENSLAFG00000009412MSI15337.879ENSLAFG00000001189HNRNPAB6737.879
ENSLAFG00000009412MSI15237.952ENSLAFG00000028290-6537.209
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLAFG00000009412MSI110089.426ENSG00000135097MSI19189.426Homo_sapiens
ENSLAFG00000009412MSI110078.033ENSAPOG00000003191MSI19076.435Acanthochromis_polyacanthus
ENSLAFG00000009412MSI110076.133ENSAPOG00000023458-9176.133Acanthochromis_polyacanthus
ENSLAFG00000009412MSI110072.324ENSAMEG00000013302MSI110072.324Ailuropoda_melanoleuca
ENSLAFG00000009412MSI19676.712ENSACIG00000017754-7281.106Amphilophus_citrinellus
ENSLAFG00000009412MSI110076.435ENSAOCG00000003804MSI19076.435Amphiprion_ocellaris
ENSLAFG00000009412MSI110075.082ENSAOCG00000009031-9175.082Amphiprion_ocellaris
ENSLAFG00000009412MSI110076.435ENSAPEG00000003245MSI19076.435Amphiprion_percula
ENSLAFG00000009412MSI110076.133ENSAPEG00000006857-7676.133Amphiprion_percula
ENSLAFG00000009412MSI110073.494ENSATEG00000023779-9073.494Anabas_testudineus
ENSLAFG00000009412MSI110076.721ENSATEG00000017059MSI19575.831Anabas_testudineus
ENSLAFG00000009412MSI110086.405ENSACAG00000002762MSI19186.405Anolis_carolinensis
ENSLAFG00000009412MSI18183.521ENSANAG00000027901-8283.521Aotus_nancymaae
ENSLAFG00000009412MSI110089.426ENSANAG00000027151MSI19289.426Aotus_nancymaae
ENSLAFG00000009412MSI110075.831ENSACLG00000011230MSI19075.831Astatotilapia_calliptera
ENSLAFG00000009412MSI110075.529ENSACLG00000000117-9675.529Astatotilapia_calliptera
ENSLAFG00000009412MSI110075.410ENSAMXG00000038960msi17574.622Astyanax_mexicanus
ENSLAFG00000009412MSI110089.426ENSBTAG00000009800MSI19689.426Bos_taurus
ENSLAFG00000009412MSI110089.426ENSCJAG00000008578MSI19189.426Callithrix_jacchus
ENSLAFG00000009412MSI110089.426ENSCAFG00000010283MSI19189.426Canis_familiaris
ENSLAFG00000009412MSI110088.818ENSCAFG00020020585MSI110088.818Canis_lupus_dingo
ENSLAFG00000009412MSI110083.728ENSCHIG00000024304MSI19183.728Capra_hircus
ENSLAFG00000009412MSI110089.362ENSTSYG00000033949MSI110090.520Carlito_syrichta
ENSLAFG00000009412MSI110087.273ENSCAPG00000003919MSI17887.273Cavia_aperea
ENSLAFG00000009412MSI110089.426ENSCPOG00000012361MSI19689.426Cavia_porcellus
ENSLAFG00000009412MSI110089.426ENSCCAG00000035567MSI19189.426Cebus_capucinus
ENSLAFG00000009412MSI110089.426ENSCATG00000030019MSI19189.426Cercocebus_atys
ENSLAFG00000009412MSI110089.426ENSCLAG00000011329MSI19689.426Chinchilla_lanigera
ENSLAFG00000009412MSI17185.253ENSCSAG00000002265MSI18481.707Chlorocebus_sabaeus
ENSLAFG00000009412MSI110085.498ENSCPBG00000011349MSI19185.498Chrysemys_picta_bellii
ENSLAFG00000009412MSI110089.394ENSCANG00000040651MSI110089.394Colobus_angolensis_palliatus
ENSLAFG00000009412MSI110089.426ENSCGRG00001018883Msi19189.426Cricetulus_griseus_chok1gshd
ENSLAFG00000009412MSI110089.426ENSCGRG00000002191Msi17289.426Cricetulus_griseus_crigri
ENSLAFG00000009412MSI110075.082ENSCSEG00000011032MSI19675.410Cynoglossus_semilaevis
ENSLAFG00000009412MSI110076.393ENSCSEG00000008352-9076.393Cynoglossus_semilaevis
ENSLAFG00000009412MSI110076.133ENSCSEG00000005834-9482.174Cynoglossus_semilaevis
ENSLAFG00000009412MSI17068.261ENSCVAG00000017463-8868.261Cyprinodon_variegatus
ENSLAFG00000009412MSI110077.377ENSCVAG00000009100MSI19077.705Cyprinodon_variegatus
ENSLAFG00000009412MSI19079.310ENSDARG00000102015CABZ01037298.19078.970Danio_rerio
ENSLAFG00000009412MSI110076.645ENSDARG00000010710msi19976.645Danio_rerio
ENSLAFG00000009412MSI110079.456ENSDNOG00000005713MSI19179.456Dasypus_novemcinctus
ENSLAFG00000009412MSI110089.426ENSDORG00000005610Msi19389.426Dipodomys_ordii
ENSLAFG00000009412MSI110085.152ENSETEG00000004756MSI110085.152Echinops_telfairi
ENSLAFG00000009412MSI110089.426ENSEASG00005004736MSI19189.426Equus_asinus_asinus
ENSLAFG00000009412MSI110089.426ENSECAG00000017526MSI19189.426Equus_caballus
ENSLAFG00000009412MSI110072.642ENSELUG00000023280-9672.956Esox_lucius
ENSLAFG00000009412MSI110071.225ENSELUG00000023219MSI18871.225Esox_lucius
ENSLAFG00000009412MSI110089.426ENSFCAG00000011007MSI19189.426Felis_catus
ENSLAFG00000009412MSI110084.665ENSFALG00000007574MSI110084.665Ficedula_albicollis
ENSLAFG00000009412MSI110089.091ENSFDAG00000019586MSI110089.091Fukomys_damarensis
ENSLAFG00000009412MSI110076.435ENSFHEG00000022446MSI19176.435Fundulus_heteroclitus
ENSLAFG00000009412MSI110078.033ENSFHEG00000003560-9278.033Fundulus_heteroclitus
ENSLAFG00000009412MSI110067.976ENSGMOG00000017838-9067.976Gadus_morhua
ENSLAFG00000009412MSI110074.018ENSGMOG00000001006MSI19073.716Gadus_morhua
ENSLAFG00000009412MSI110082.545ENSGALG00000007227MSI19076.667Gallus_gallus
ENSLAFG00000009412MSI110062.745ENSGAFG00000005860-8962.745Gambusia_affinis
ENSLAFG00000009412MSI110075.831ENSGAFG00000021522MSI19075.831Gambusia_affinis
ENSLAFG00000009412MSI110075.082ENSGACG00000012679MSI19174.924Gasterosteus_aculeatus
ENSLAFG00000009412MSI110072.508ENSGACG00000008674-9172.508Gasterosteus_aculeatus
ENSLAFG00000009412MSI110085.498ENSGAGG00000016037MSI19185.498Gopherus_agassizii
ENSLAFG00000009412MSI110088.924ENSGGOG00000010328MSI110088.924Gorilla_gorilla
ENSLAFG00000009412MSI110075.831ENSHBUG00000021921MSI19075.831Haplochromis_burtoni
ENSLAFG00000009412MSI110075.529ENSHBUG00000011841-9175.529Haplochromis_burtoni
ENSLAFG00000009412MSI110089.124ENSHGLG00000012782MSI19189.124Heterocephalus_glaber_female
ENSLAFG00000009412MSI110089.091ENSHGLG00100016848MSI110089.091Heterocephalus_glaber_male
ENSLAFG00000009412MSI110075.738ENSHCOG00000012067-8975.738Hippocampus_comes
ENSLAFG00000009412MSI110076.393ENSHCOG00000012019MSI19676.721Hippocampus_comes
ENSLAFG00000009412MSI110075.082ENSIPUG00000001976msi19775.082Ictalurus_punctatus
ENSLAFG00000009412MSI110088.818ENSSTOG00000009799MSI110088.818Ictidomys_tridecemlineatus
ENSLAFG00000009412MSI110073.968ENSJJAG00000010643-9073.968Jaculus_jaculus
ENSLAFG00000009412MSI110089.426ENSJJAG00000010463Msi19189.426Jaculus_jaculus
ENSLAFG00000009412MSI110075.227ENSKMAG00000011251MSI19075.227Kryptolebias_marmoratus
ENSLAFG00000009412MSI110079.344ENSKMAG00000019877-9679.672Kryptolebias_marmoratus
ENSLAFG00000009412MSI110076.393ENSLBEG00000008789MSI19175.529Labrus_bergylta
ENSLAFG00000009412MSI110078.033ENSLBEG00000001375-9076.133Labrus_bergylta
ENSLAFG00000009412MSI110076.577ENSLACG00000018287MSI19676.435Latimeria_chalumnae
ENSLAFG00000009412MSI110089.426ENSMFAG00000001798MSI19689.426Macaca_fascicularis
ENSLAFG00000009412MSI110089.426ENSMMUG00000031527MSI19189.426Macaca_mulatta
ENSLAFG00000009412MSI110089.426ENSMNEG00000040034MSI19189.426Macaca_nemestrina
ENSLAFG00000009412MSI110089.394ENSMLEG00000003921MSI110089.394Mandrillus_leucophaeus
ENSLAFG00000009412MSI110078.689ENSMAMG00000018426-9876.435Mastacembelus_armatus
ENSLAFG00000009412MSI110074.924ENSMAMG00000002279MSI19074.924Mastacembelus_armatus
ENSLAFG00000009412MSI110075.831ENSMZEG00005026892MSI19075.831Maylandia_zebra
ENSLAFG00000009412MSI110076.721ENSMZEG00005000340-9077.049Maylandia_zebra
ENSLAFG00000009412MSI16980.571ENSMGAG00000016518-10080.571Meleagris_gallopavo
ENSLAFG00000009412MSI17185.253ENSMAUG00000016820Msi19584.914Mesocricetus_auratus
ENSLAFG00000009412MSI110089.426ENSMICG00000033181MSI19189.426Microcebus_murinus
ENSLAFG00000009412MSI110089.728ENSMOCG00000002286Msi19189.728Microtus_ochrogaster
ENSLAFG00000009412MSI110074.098ENSMMOG00000010492MSI18974.098Mola_mola
ENSLAFG00000009412MSI110078.689ENSMMOG00000012265-9679.016Mola_mola
ENSLAFG00000009412MSI110058.258ENSMODG00000003189-10058.258Monodelphis_domestica
ENSLAFG00000009412MSI110078.361ENSMALG00000001426-9678.361Monopterus_albus
ENSLAFG00000009412MSI110075.529ENSMALG00000017889MSI19175.529Monopterus_albus
ENSLAFG00000009412MSI110089.124MGP_CAROLIEiJ_G0027626Msi19882.900Mus_caroli
ENSLAFG00000009412MSI110089.124ENSMUSG00000054256Msi19885.801Mus_musculus
ENSLAFG00000009412MSI110088.822MGP_PahariEiJ_G0024206Msi19882.900Mus_pahari
ENSLAFG00000009412MSI110089.124MGP_SPRETEiJ_G0028624Msi19882.900Mus_spretus
ENSLAFG00000009412MSI110088.818ENSMPUG00000003168MSI110088.818Mustela_putorius_furo
ENSLAFG00000009412MSI110079.882ENSMLUG00000010313MSI110079.882Myotis_lucifugus
ENSLAFG00000009412MSI110089.426ENSNGAG00000014508Msi19189.426Nannospalax_galili
ENSLAFG00000009412MSI19280.591ENSNBRG00000018012MSI19180.591Neolamprologus_brichardi
ENSLAFG00000009412MSI110076.721ENSNBRG00000000841-9077.049Neolamprologus_brichardi
ENSLAFG00000009412MSI19978.788ENSNLEG00000015636MSI110078.788Nomascus_leucogenys
ENSLAFG00000009412MSI110068.693ENSMEUG00000015759MSI110068.693Notamacropus_eugenii
ENSLAFG00000009412MSI19680.757ENSOPRG00000016879MSI110080.757Ochotona_princeps
ENSLAFG00000009412MSI110089.394ENSODEG00000006328MSI110089.394Octodon_degus
ENSLAFG00000009412MSI19584.615ENSONIG00000011182MSI19175.529Oreochromis_niloticus
ENSLAFG00000009412MSI110076.133ENSONIG00000019452-9076.133Oreochromis_niloticus
ENSLAFG00000009412MSI110088.498ENSOCUG00000027716MSI110088.498Oryctolagus_cuniculus
ENSLAFG00000009412MSI110077.049ENSORLG00000019978-9377.049Oryzias_latipes
ENSLAFG00000009412MSI110076.435ENSORLG00000029593MSI19375.896Oryzias_latipes
ENSLAFG00000009412MSI110076.133ENSORLG00020001208-6476.133Oryzias_latipes_hni
ENSLAFG00000009412MSI110078.689ENSORLG00020008266MSI19379.016Oryzias_latipes_hni
ENSLAFG00000009412MSI110078.689ENSORLG00015003916MSI19379.016Oryzias_latipes_hsok
ENSLAFG00000009412MSI110077.049ENSORLG00015013672-6877.377Oryzias_latipes_hsok
ENSLAFG00000009412MSI110077.341ENSOMEG00000002272-9676.873Oryzias_melastigma
ENSLAFG00000009412MSI110076.133ENSOMEG00000017536MSI19673.750Oryzias_melastigma
ENSLAFG00000009412MSI110088.623ENSOGAG00000003847MSI19188.623Otolemur_garnettii
ENSLAFG00000009412MSI110085.542ENSOARG00000012097MSI110085.542Ovis_aries
ENSLAFG00000009412MSI110089.394ENSPPAG00000043073MSI110089.394Pan_paniscus
ENSLAFG00000009412MSI110089.426ENSPPRG00000000370MSI19189.426Panthera_pardus
ENSLAFG00000009412MSI110088.818ENSPTIG00000008913MSI110088.818Panthera_tigris_altaica
ENSLAFG00000009412MSI110089.426ENSPTRG00000005531MSI19189.426Pan_troglodytes
ENSLAFG00000009412MSI110089.124ENSPANG00000006335MSI19189.124Papio_anubis
ENSLAFG00000009412MSI110078.033ENSPKIG00000016497MSI19078.033Paramormyrops_kingsleyae
ENSLAFG00000009412MSI110075.831ENSPKIG00000023575-9175.831Paramormyrops_kingsleyae
ENSLAFG00000009412MSI110081.269ENSPSIG00000011608-8981.873Pelodiscus_sinensis
ENSLAFG00000009412MSI19090.043ENSPSIG00000009621-10090.043Pelodiscus_sinensis
ENSLAFG00000009412MSI19676.370ENSPMGG00000000514MSI19376.712Periophthalmus_magnuspinnatus
ENSLAFG00000009412MSI110066.460ENSPMGG00000007743-9065.584Periophthalmus_magnuspinnatus
ENSLAFG00000009412MSI110089.124ENSPEMG00000010491Msi19389.124Peromyscus_maniculatus_bairdii
ENSLAFG00000009412MSI110078.802ENSPFOG00000013113MSI19176.133Poecilia_formosa
ENSLAFG00000009412MSI110076.435ENSPFOG00000008319-7776.435Poecilia_formosa
ENSLAFG00000009412MSI110076.133ENSPLAG00000014025-9176.133Poecilia_latipinna
ENSLAFG00000009412MSI110076.435ENSPLAG00000012431-9074.522Poecilia_latipinna
ENSLAFG00000009412MSI110077.049ENSPMEG00000012796MSI19176.133Poecilia_mexicana
ENSLAFG00000009412MSI110076.144ENSPMEG00000007025-9076.144Poecilia_mexicana
ENSLAFG00000009412MSI18776.106ENSPREG00000014574-10078.431Poecilia_reticulata
ENSLAFG00000009412MSI110078.361ENSPREG00000021416-9078.689Poecilia_reticulata
ENSLAFG00000009412MSI110089.426ENSPPYG00000005027MSI19189.426Pongo_abelii
ENSLAFG00000009412MSI110064.364ENSPCAG00000002300MSI110064.364Procavia_capensis
ENSLAFG00000009412MSI110089.426ENSPCOG00000017341MSI19189.426Propithecus_coquereli
ENSLAFG00000009412MSI110073.860ENSPVAG00000002225MSI110073.860Pteropus_vampyrus
ENSLAFG00000009412MSI110075.831ENSPNYG00000004379MSI19075.831Pundamilia_nyererei
ENSLAFG00000009412MSI110075.529ENSPNYG00000002529-9175.529Pundamilia_nyererei
ENSLAFG00000009412MSI110075.082ENSPNAG00000019337msi19174.320Pygocentrus_nattereri
ENSLAFG00000009412MSI110088.818ENSRNOG00000001156Msi110088.818Rattus_norvegicus
ENSLAFG00000009412MSI110089.426ENSRBIG00000036889MSI110088.818Rhinopithecus_bieti
ENSLAFG00000009412MSI110089.426ENSRROG00000041076MSI19989.426Rhinopithecus_roxellana
ENSLAFG00000009412MSI110089.426ENSSBOG00000030259MSI19489.426Saimiri_boliviensis_boliviensis
ENSLAFG00000009412MSI110076.547ENSSHAG00000006834MSI110076.547Sarcophilus_harrisii
ENSLAFG00000009412MSI110078.689ENSSFOG00015005350MSI19678.689Scleropages_formosus
ENSLAFG00000009412MSI110077.039ENSSFOG00015014964-9177.039Scleropages_formosus
ENSLAFG00000009412MSI110075.090ENSSMAG00000009156-7381.364Scophthalmus_maximus
ENSLAFG00000009412MSI110077.049ENSSMAG00000018824MSI19777.049Scophthalmus_maximus
ENSLAFG00000009412MSI110076.133ENSSDUG00000022697-9675.316Seriola_dumerili
ENSLAFG00000009412MSI110075.831ENSSDUG00000001027MSI19175.831Seriola_dumerili
ENSLAFG00000009412MSI110075.316ENSSLDG00000018706-9675.316Seriola_lalandi_dorsalis
ENSLAFG00000009412MSI110076.721ENSSLDG00000016832MSI19175.831Seriola_lalandi_dorsalis
ENSLAFG00000009412MSI110084.894ENSSPUG00000015741MSI19184.894Sphenodon_punctatus
ENSLAFG00000009412MSI110078.361ENSSPAG00000013098-9676.737Stegastes_partitus
ENSLAFG00000009412MSI18877.041ENSSPAG00000014085-10077.041Stegastes_partitus
ENSLAFG00000009412MSI15371.901ENSSPAG00000015573zgc:1107966071.901Stegastes_partitus
ENSLAFG00000009412MSI110089.124ENSSSCG00000029365MSI110088.498Sus_scrofa
ENSLAFG00000009412MSI110086.103ENSTGUG00000009534MSI19686.103Taeniopygia_guttata
ENSLAFG00000009412MSI19278.298ENSTRUG00000016249MSI110073.034Takifugu_rubripes
ENSLAFG00000009412MSI110075.410ENSTRUG00000015636-7975.410Takifugu_rubripes
ENSLAFG00000009412MSI110053.548ENSTNIG00000019814-9253.353Tetraodon_nigroviridis
ENSLAFG00000009412MSI110070.679ENSTNIG00000011469MSI19070.679Tetraodon_nigroviridis
ENSLAFG00000009412MSI110077.091ENSTBEG00000007182MSI110077.091Tupaia_belangeri
ENSLAFG00000009412MSI110070.393ENSTTRG00000005663MSI19670.393Tursiops_truncatus
ENSLAFG00000009412MSI18077.533ENSUAMG00000015514MSI19476.923Ursus_americanus
ENSLAFG00000009412MSI110081.447ENSUMAG00000006176MSI19081.447Ursus_maritimus
ENSLAFG00000009412MSI110089.426ENSVVUG00000020993MSI19989.124Vulpes_vulpes
ENSLAFG00000009412MSI110081.325ENSXETG00000012216msi19181.437Xenopus_tropicalis
ENSLAFG00000009412MSI110073.927ENSXCOG00000017605MSI18573.927Xiphophorus_couchianus
ENSLAFG00000009412MSI110076.133ENSXMAG00000027103MSI18974.183Xiphophorus_maculatus
ENSLAFG00000009412MSI110078.689ENSXMAG00000018237-9076.133Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us