EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000009458 (Gene tree)
Gene ID: -
Gene Symbol: SNRPN
Alias: HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN
Full Name: small nuclear ribonucleoprotein polypeptide N
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 3426 bases
Position: chrscaffold_93:5116015-5119440
Accession: 11164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000007931	LSM	PF01423.22	6.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000009458	SNRPN-201	723	-	ENSLAFP00000007931	240 (aa)	-	G3T3S1

Gene Model

Click here to download ENSLAFG00000009458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000009458's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000009458	SNRPN	92	88.688	ENSLAFG00000017588	SNRPB	96	88.688

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000009458	SNRPN	100	99.583	ENSG00000128739	SNRPN	99	100.000	Homo_sapiens
ENSLAFG00000009458	SNRPN	100	99.167	ENSAMEG00000007034	SNRPN	98	99.167	Ailuropoda_melanoleuca
ENSLAFG00000009458	SNRPN	100	99.583	ENSANAG00000034241	SNRPN	100	99.583	Aotus_nancymaae
ENSLAFG00000009458	SNRPN	99	99.163	ENSBTAG00000008251	SNRPN	99	99.163	Bos_taurus
ENSLAFG00000009458	SNRPN	100	99.583	ENSCJAG00000003759	-	99	99.582	Callithrix_jacchus
ENSLAFG00000009458	SNRPN	95	99.119	ENSCJAG00000042622	-	95	99.119	Callithrix_jacchus
ENSLAFG00000009458	SNRPN	99	99.163	ENSCAFG00000010127	SNRPN	99	99.163	Canis_familiaris
ENSLAFG00000009458	SNRPN	99	99.163	ENSCAFG00020024075	SNRPN	99	99.163	Canis_lupus_dingo
ENSLAFG00000009458	SNRPN	99	99.163	ENSCHIG00000017477	SNRPN	99	99.163	Capra_hircus
ENSLAFG00000009458	SNRPN	99	99.582	ENSTSYG00000005248	SNRPN	99	99.582	Carlito_syrichta
ENSLAFG00000009458	SNRPN	100	99.167	ENSCAPG00000003047	SNRPN	99	99.582	Cavia_aperea
ENSLAFG00000009458	SNRPN	100	99.167	ENSCPOG00000020270	SNRPN	99	99.582	Cavia_porcellus
ENSLAFG00000009458	SNRPN	100	99.583	ENSCCAG00000024231	SNRPN	99	99.582	Cebus_capucinus
ENSLAFG00000009458	SNRPN	100	99.583	ENSCATG00000032518	SNRPN	99	99.582	Cercocebus_atys
ENSLAFG00000009458	SNRPN	99	99.582	ENSCLAG00000011376	SNRPN	99	99.582	Chinchilla_lanigera
ENSLAFG00000009458	SNRPN	99	99.582	ENSCSAG00000006406	SNRPN	99	99.582	Chlorocebus_sabaeus
ENSLAFG00000009458	SNRPN	98	99.145	ENSCHOG00000001846	SNRPN	88	99.145	Choloepus_hoffmanni
ENSLAFG00000009458	SNRPN	100	99.583	ENSCANG00000041156	SNRPN	99	99.582	Colobus_angolensis_palliatus
ENSLAFG00000009458	SNRPN	100	99.167	ENSCGRG00001004136	Snrpn	99	99.163	Cricetulus_griseus_chok1gshd
ENSLAFG00000009458	SNRPN	100	99.167	ENSCGRG00000001621	Snrpn	99	99.163	Cricetulus_griseus_crigri
ENSLAFG00000009458	SNRPN	72	91.279	ENSCVAG00000014193	SNRPN	69	92.814	Cyprinodon_variegatus
ENSLAFG00000009458	SNRPN	100	98.333	ENSDNOG00000037060	SNRPN	98	98.333	Dasypus_novemcinctus
ENSLAFG00000009458	SNRPN	99	100.000	ENSDORG00000004527	Snrpn	99	100.000	Dipodomys_ordii
ENSLAFG00000009458	SNRPN	99	99.163	ENSEASG00005017871	SNRPN	99	99.163	Equus_asinus_asinus
ENSLAFG00000009458	SNRPN	99	99.163	ENSECAG00000018148	SNRPN	99	99.163	Equus_caballus
ENSLAFG00000009458	SNRPN	99	98.745	ENSEEUG00000007440	-	100	98.745	Erinaceus_europaeus
ENSLAFG00000009458	SNRPN	99	99.163	ENSFCAG00000022298	-	99	99.163	Felis_catus
ENSLAFG00000009458	SNRPN	76	86.339	ENSFDAG00000010528	-	86	86.339	Fukomys_damarensis
ENSLAFG00000009458	SNRPN	99	100.000	ENSFDAG00000016578	-	99	100.000	Fukomys_damarensis
ENSLAFG00000009458	SNRPN	73	76.705	ENSGMOG00000018161	SNRPN	73	76.048	Gadus_morhua
ENSLAFG00000009458	SNRPN	90	73.023	ENSGGOG00000024469	-	69	83.942	Gorilla_gorilla
ENSLAFG00000009458	SNRPN	100	99.583	ENSGGOG00000003988	SNRPN	99	99.582	Gorilla_gorilla
ENSLAFG00000009458	SNRPN	99	84.937	ENSHGLG00000002327	-	88	84.434	Heterocephalus_glaber_female
ENSLAFG00000009458	SNRPN	89	80.374	ENSHGLG00000020936	-	87	79.245	Heterocephalus_glaber_female
ENSLAFG00000009458	SNRPN	88	91.038	ENSHGLG00000019812	-	88	90.566	Heterocephalus_glaber_female
ENSLAFG00000009458	SNRPN	99	99.582	ENSHGLG00000011924	SNRPN	99	99.582	Heterocephalus_glaber_female
ENSLAFG00000009458	SNRPN	99	99.582	ENSHGLG00100016559	SNRPN	99	99.582	Heterocephalus_glaber_male
ENSLAFG00000009458	SNRPN	99	82.427	ENSHGLG00100004881	-	88	82.547	Heterocephalus_glaber_male
ENSLAFG00000009458	SNRPN	88	91.038	ENSHGLG00100021056	-	88	90.566	Heterocephalus_glaber_male
ENSLAFG00000009458	SNRPN	99	99.582	ENSSTOG00000001339	SNRPN	99	99.582	Ictidomys_tridecemlineatus
ENSLAFG00000009458	SNRPN	100	99.583	ENSMFAG00000042235	SNRPN	99	99.582	Macaca_fascicularis
ENSLAFG00000009458	SNRPN	100	99.583	ENSMMUG00000023139	SNURF	99	99.582	Macaca_mulatta
ENSLAFG00000009458	SNRPN	100	99.583	ENSMNEG00000031291	SNRPN	99	99.582	Macaca_nemestrina
ENSLAFG00000009458	SNRPN	100	99.583	ENSMLEG00000038837	SNRPN	99	99.582	Mandrillus_leucophaeus
ENSLAFG00000009458	SNRPN	92	85.909	ENSMGAG00000008696	SNRPN	92	85.520	Meleagris_gallopavo
ENSLAFG00000009458	SNRPN	99	99.582	ENSMAUG00000000051	Snrpn	99	99.582	Mesocricetus_auratus
ENSLAFG00000009458	SNRPN	99	99.582	ENSMICG00000042356	SNRPN	99	99.582	Microcebus_murinus
ENSLAFG00000009458	SNRPN	99	99.582	ENSMOCG00000015350	Snrpn	99	99.582	Microtus_ochrogaster
ENSLAFG00000009458	SNRPN	92	94.091	ENSMODG00000013926	-	92	94.091	Monodelphis_domestica
ENSLAFG00000009458	SNRPN	99	99.582	MGP_CAROLIEiJ_G0029815	Snrpn	99	99.582	Mus_caroli
ENSLAFG00000009458	SNRPN	99	99.582	ENSMUSG00000102252	Snrpn	99	99.582	Mus_musculus
ENSLAFG00000009458	SNRPN	99	99.582	MGP_PahariEiJ_G0013040	Snrpn	99	99.582	Mus_pahari
ENSLAFG00000009458	SNRPN	99	99.582	MGP_SPRETEiJ_G0030918	Snrpn	99	99.582	Mus_spretus
ENSLAFG00000009458	SNRPN	99	99.163	ENSMPUG00000014638	-	99	99.163	Mustela_putorius_furo
ENSLAFG00000009458	SNRPN	88	51.429	ENSMPUG00000007115	-	63	70.213	Mustela_putorius_furo
ENSLAFG00000009458	SNRPN	100	99.583	ENSMLUG00000023361	-	98	99.583	Myotis_lucifugus
ENSLAFG00000009458	SNRPN	85	61.275	ENSMLUG00000025849	-	73	63.057	Myotis_lucifugus
ENSLAFG00000009458	SNRPN	95	62.719	ENSMLUG00000024428	-	62	71.111	Myotis_lucifugus
ENSLAFG00000009458	SNRPN	99	99.582	ENSNGAG00000000181	Snrpn	99	99.582	Nannospalax_galili
ENSLAFG00000009458	SNRPN	99	83.264	ENSNLEG00000001376	SNRPN	99	83.264	Nomascus_leucogenys
ENSLAFG00000009458	SNRPN	99	100.000	ENSODEG00000013478	-	99	100.000	Octodon_degus
ENSLAFG00000009458	SNRPN	95	100.000	ENSODEG00000019708	-	95	100.000	Octodon_degus
ENSLAFG00000009458	SNRPN	99	99.582	ENSODEG00000020110	-	99	99.582	Octodon_degus
ENSLAFG00000009458	SNRPN	98	81.624	ENSODEG00000016065	-	87	86.957	Octodon_degus
ENSLAFG00000009458	SNRPN	99	99.167	ENSOCUG00000003532	-	99	99.167	Oryctolagus_cuniculus
ENSLAFG00000009458	SNRPN	73	92.045	ENSORLG00020007490	SNRPN	69	93.413	Oryzias_latipes_hni
ENSLAFG00000009458	SNRPN	73	92.045	ENSORLG00015003332	SNRPN	69	93.413	Oryzias_latipes_hsok
ENSLAFG00000009458	SNRPN	73	92.614	ENSOMEG00000002066	SNRPN	69	94.012	Oryzias_melastigma
ENSLAFG00000009458	SNRPN	99	99.582	ENSOGAG00000007392	SNRPN	99	99.582	Otolemur_garnettii
ENSLAFG00000009458	SNRPN	99	99.163	ENSOARG00000009080	SNRPN	99	99.163	Ovis_aries
ENSLAFG00000009458	SNRPN	100	99.583	ENSPPAG00000027650	SNRPN	99	99.582	Pan_paniscus
ENSLAFG00000009458	SNRPN	97	68.803	ENSPPAG00000034049	-	65	79.720	Pan_paniscus
ENSLAFG00000009458	SNRPN	85	63.902	ENSPPRG00000006957	-	73	70.861	Panthera_pardus
ENSLAFG00000009458	SNRPN	99	99.163	ENSPPRG00000019878	-	99	99.163	Panthera_pardus
ENSLAFG00000009458	SNRPN	99	98.745	ENSPTIG00000004537	SNRPN	99	98.745	Panthera_tigris_altaica
ENSLAFG00000009458	SNRPN	100	99.583	ENSPTRG00000006826	SNRPN	99	99.582	Pan_troglodytes
ENSLAFG00000009458	SNRPN	97	69.231	ENSPTRG00000052400	-	65	80.420	Pan_troglodytes
ENSLAFG00000009458	SNRPN	100	99.583	ENSPANG00000020142	SNRPN	99	99.582	Papio_anubis
ENSLAFG00000009458	SNRPN	89	95.305	ENSPEMG00000020979	-	88	95.283	Peromyscus_maniculatus_bairdii
ENSLAFG00000009458	SNRPN	99	99.582	ENSPEMG00000012911	-	99	99.582	Peromyscus_maniculatus_bairdii
ENSLAFG00000009458	SNRPN	88	85.849	ENSPEMG00000013920	-	87	86.321	Peromyscus_maniculatus_bairdii
ENSLAFG00000009458	SNRPN	76	97.268	ENSPCIG00000004699	-	68	94.836	Phascolarctos_cinereus
ENSLAFG00000009458	SNRPN	72	93.605	ENSPMEG00000020674	SNRPN	69	93.413	Poecilia_mexicana
ENSLAFG00000009458	SNRPN	99	99.582	ENSPPYG00000006269	SNURF	99	99.582	Pongo_abelii
ENSLAFG00000009458	SNRPN	99	99.582	ENSPCOG00000014231	SNRPN	99	99.582	Propithecus_coquereli
ENSLAFG00000009458	SNRPN	99	99.582	ENSRNOG00000059764	Snrpn	99	99.582	Rattus_norvegicus
ENSLAFG00000009458	SNRPN	100	99.583	ENSRBIG00000041765	SNRPN	99	99.582	Rhinopithecus_bieti
ENSLAFG00000009458	SNRPN	100	99.583	ENSRROG00000035157	SNRPN	99	99.582	Rhinopithecus_roxellana
ENSLAFG00000009458	SNRPN	100	99.167	ENSSBOG00000000110	-	99	99.582	Saimiri_boliviensis_boliviensis
ENSLAFG00000009458	SNRPN	99	98.326	ENSSBOG00000024929	-	99	98.326	Saimiri_boliviensis_boliviensis
ENSLAFG00000009458	SNRPN	76	97.253	ENSSHAG00000010257	-	87	94.811	Sarcophilus_harrisii
ENSLAFG00000009458	SNRPN	99	78.243	ENSSARG00000000072	SNRPN	100	78.243	Sorex_araneus
ENSLAFG00000009458	SNRPN	99	99.582	ENSSSCG00000028124	SNRPN	100	99.569	Sus_scrofa
ENSLAFG00000009458	SNRPN	99	99.163	ENSTTRG00000010966	SNRPN	88	99.163	Tursiops_truncatus
ENSLAFG00000009458	SNRPN	93	99.103	ENSUAMG00000016284	SNRPN	78	99.103	Ursus_americanus
ENSLAFG00000009458	SNRPN	99	99.163	ENSUMAG00000025589	SNRPN	99	99.163	Ursus_maritimus
ENSLAFG00000009458	SNRPN	95	99.123	ENSVVUG00000017971	SNRPN	93	99.123	Vulpes_vulpes