EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLAFG00000009467 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Loxodonta_africana
Status
putative
Strand
Plus strand
Length
37665 bases
Position
chrscaffold_20:18890111-18927775
Accession
100657725
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLAFP00000007940CPSF73-100_CPF11718.88.3e-5511
ENSLAFP00000007940Beta-CaspPF10996.84.5e-3411
ENSLAFP00000007940Lactamase_BPF00753.277.1e-1911
ENSLAFP00000007940RMMBLPF07521.121.2e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLAFT00000009468CPSF3-2012043XM_010591906ENSLAFP00000007940680 (aa)XP_010590208G3T3S7
Gene Model
Click here to download ENSLAFG00000009467's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000009467's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLAFG00000009467CPSF37038.554ENSLAFG00000013687INTS118138.554
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLAFG00000009467CPSF310097.647ENSG00000119203CPSF310099.265Homo_sapiens
ENSLAFG00000009467CPSF39984.218ENSAPOG00000022087cpsf39884.218Acanthochromis_polyacanthus
ENSLAFG00000009467CPSF37395.181ENSAPOG00000012241CPSF39095.181Acanthochromis_polyacanthus
ENSLAFG00000009467CPSF310097.941ENSAMEG00000008493CPSF39997.941Ailuropoda_melanoleuca
ENSLAFG00000009467CPSF39286.667ENSACIG00000023663CPSF39986.667Amphilophus_citrinellus
ENSLAFG00000009467CPSF39282.803ENSACIG00000009846cpsf39982.803Amphilophus_citrinellus
ENSLAFG00000009467CPSF39986.745ENSAOCG00000010077CPSF39886.745Amphiprion_ocellaris
ENSLAFG00000009467CPSF39984.389ENSAOCG00000022056cpsf39389.949Amphiprion_ocellaris
ENSLAFG00000009467CPSF39984.536ENSAPEG00000019526cpsf39785.648Amphiprion_percula
ENSLAFG00000009467CPSF39986.745ENSAPEG00000021167CPSF39886.745Amphiprion_percula
ENSLAFG00000009467CPSF39984.242ENSATEG00000003959cpsf39884.242Anabas_testudineus
ENSLAFG00000009467CPSF39982.032ENSATEG00000014525CPSF39882.032Anabas_testudineus
ENSLAFG00000009467CPSF39895.802ENSAPLG00000006941CPSF39895.802Anas_platyrhynchos
ENSLAFG00000009467CPSF39392.913ENSACAG00000001759CPSF39992.913Anolis_carolinensis
ENSLAFG00000009467CPSF310091.029ENSANAG00000031254CPSF39992.804Aotus_nancymaae
ENSLAFG00000009467CPSF39286.508ENSACLG00000018846CPSF39986.508Astatotilapia_calliptera
ENSLAFG00000009467CPSF39885.865ENSACLG00000014484cpsf39985.865Astatotilapia_calliptera
ENSLAFG00000009467CPSF39986.892ENSAMXG00000004786cpsf39886.892Astyanax_mexicanus
ENSLAFG00000009467CPSF310098.088ENSBTAG00000019735CPSF39998.088Bos_taurus
ENSLAFG00000009467CPSF39159.091WBGene00013460cpsf-39059.091Caenorhabditis_elegans
ENSLAFG00000009467CPSF310097.353ENSCJAG00000006276CPSF39898.651Callithrix_jacchus
ENSLAFG00000009467CPSF310097.941ENSCAFG00000003375CPSF39597.941Canis_familiaris
ENSLAFG00000009467CPSF39098.049ENSCAFG00020026799CPSF39998.049Canis_lupus_dingo
ENSLAFG00000009467CPSF310098.088ENSCHIG00000013973CPSF39998.088Capra_hircus
ENSLAFG00000009467CPSF310097.647ENSTSYG00000002967CPSF39997.647Carlito_syrichta
ENSLAFG00000009467CPSF39897.451ENSCAPG00000013851CPSF310097.451Cavia_aperea
ENSLAFG00000009467CPSF310096.176ENSCPOG00000011299CPSF39996.176Cavia_porcellus
ENSLAFG00000009467CPSF310097.500ENSCCAG00000036730CPSF39998.801Cebus_capucinus
ENSLAFG00000009467CPSF310095.007ENSCATG00000014770CPSF39998.267Cercocebus_atys
ENSLAFG00000009467CPSF310095.882ENSCLAG00000002727CPSF39995.882Chinchilla_lanigera
ENSLAFG00000009467CPSF310089.853ENSCSAG00000007125CPSF39989.853Chlorocebus_sabaeus
ENSLAFG00000009467CPSF387100.000ENSCHOG00000000180CPSF38572.105Choloepus_hoffmanni
ENSLAFG00000009467CPSF39994.993ENSCPBG00000014074CPSF39894.993Chrysemys_picta_bellii
ENSLAFG00000009467CPSF39868.452ENSCING00000007214-9668.452Ciona_intestinalis
ENSLAFG00000009467CPSF310084.706ENSCANG00000034435CPSF39984.706Colobus_angolensis_palliatus
ENSLAFG00000009467CPSF310097.059ENSCGRG00001013134Cpsf39997.059Cricetulus_griseus_chok1gshd
ENSLAFG00000009467CPSF310097.059ENSCGRG00000018319Cpsf39997.059Cricetulus_griseus_crigri
ENSLAFG00000009467CPSF39985.882ENSCSEG00000002021CPSF39986.553Cynoglossus_semilaevis
ENSLAFG00000009467CPSF39987.334ENSCVAG00000015067CPSF39887.334Cyprinodon_variegatus
ENSLAFG00000009467CPSF39987.482ENSDARG00000027649cpsf39887.482Danio_rerio
ENSLAFG00000009467CPSF310096.623ENSDNOG00000008940CPSF39596.623Dasypus_novemcinctus
ENSLAFG00000009467CPSF39597.372ENSDORG00000014263Cpsf39997.372Dipodomys_ordii
ENSLAFG00000009467CPSF39966.913FBgn0261065Cpsf739866.913Drosophila_melanogaster
ENSLAFG00000009467CPSF39088.091ENSETEG00000003893CPSF39488.091Echinops_telfairi
ENSLAFG00000009467CPSF39978.192ENSEBUG00000009018cpsf39878.336Eptatretus_burgeri
ENSLAFG00000009467CPSF310097.941ENSEASG00005003970CPSF39997.941Equus_asinus_asinus
ENSLAFG00000009467CPSF310097.941ENSECAG00000019911CPSF39997.941Equus_caballus
ENSLAFG00000009467CPSF310082.206ENSEEUG00000015422CPSF39982.206Erinaceus_europaeus
ENSLAFG00000009467CPSF39987.021ENSELUG00000013775cpsf39887.021Esox_lucius
ENSLAFG00000009467CPSF310098.088ENSFCAG00000007852CPSF310099.382Felis_catus
ENSLAFG00000009467CPSF39595.363ENSFALG00000006572CPSF310095.363Ficedula_albicollis
ENSLAFG00000009467CPSF39995.870ENSFDAG00000006317CPSF39895.870Fukomys_damarensis
ENSLAFG00000009467CPSF39983.923ENSFHEG00000014774cpsf39883.923Fundulus_heteroclitus
ENSLAFG00000009467CPSF36068.537ENSFHEG00000012186CPSF39968.537Fundulus_heteroclitus
ENSLAFG00000009467CPSF39985.420ENSGMOG00000003157cpsf39885.420Gadus_morhua
ENSLAFG00000009467CPSF310093.529ENSGALG00000016424CPSF39994.488Gallus_gallus
ENSLAFG00000009467CPSF39987.168ENSGAFG00000008016CPSF39887.168Gambusia_affinis
ENSLAFG00000009467CPSF39282.353ENSGAFG00000019449cpsf39982.353Gambusia_affinis
ENSLAFG00000009467CPSF36994.433ENSGAGG00000025583CPSF39394.433Gopherus_agassizii
ENSLAFG00000009467CPSF310095.396ENSGGOG00000001757CPSF310099.055Gorilla_gorilla
ENSLAFG00000009467CPSF39984.808ENSHBUG00000001188cpsf39884.808Haplochromis_burtoni
ENSLAFG00000009467CPSF36081.728ENSHBUG00000014332CPSF39981.728Haplochromis_burtoni
ENSLAFG00000009467CPSF310095.000ENSHGLG00000000666CPSF39895.000Heterocephalus_glaber_female
ENSLAFG00000009467CPSF310095.000ENSHGLG00100007765CPSF39895.000Heterocephalus_glaber_male
ENSLAFG00000009467CPSF39983.652ENSHCOG00000007251cpsf39883.652Hippocampus_comes
ENSLAFG00000009467CPSF39985.125ENSHCOG00000015957CPSF39785.125Hippocampus_comes
ENSLAFG00000009467CPSF39985.567ENSIPUG00000023488cpsf39885.567Ictalurus_punctatus
ENSLAFG00000009467CPSF310097.794ENSSTOG00000004476CPSF39997.794Ictidomys_tridecemlineatus
ENSLAFG00000009467CPSF310096.324ENSJJAG00000023415Cpsf39996.324Jaculus_jaculus
ENSLAFG00000009467CPSF39986.303ENSKMAG00000007317CPSF39886.303Kryptolebias_marmoratus
ENSLAFG00000009467CPSF39983.628ENSKMAG00000002806cpsf39883.628Kryptolebias_marmoratus
ENSLAFG00000009467CPSF39978.056ENSLBEG00000020569cpsf39478.056Labrus_bergylta
ENSLAFG00000009467CPSF35579.893ENSLBEG00000015018-9979.893Labrus_bergylta
ENSLAFG00000009467CPSF39587.790ENSLBEG00000013492CPSF39887.790Labrus_bergylta
ENSLAFG00000009467CPSF39982.448ENSLACG00000008308CPSF39882.448Latimeria_chalumnae
ENSLAFG00000009467CPSF39987.794ENSLOCG00000016823cpsf39887.794Lepisosteus_oculatus
ENSLAFG00000009467CPSF310097.647ENSMFAG00000001339CPSF39998.916Macaca_fascicularis
ENSLAFG00000009467CPSF39598.918ENSMMUG00000018038CPSF310098.918Macaca_mulatta
ENSLAFG00000009467CPSF310084.853ENSMNEG00000039447CPSF39984.853Macaca_nemestrina
ENSLAFG00000009467CPSF310097.794ENSMLEG00000026825CPSF39997.794Mandrillus_leucophaeus
ENSLAFG00000009467CPSF39984.366ENSMAMG00000003076cpsf39884.366Mastacembelus_armatus
ENSLAFG00000009467CPSF39285.127ENSMAMG00000008835CPSF39985.127Mastacembelus_armatus
ENSLAFG00000009467CPSF39987.482ENSMZEG00005006258CPSF39986.508Maylandia_zebra
ENSLAFG00000009467CPSF39984.808ENSMZEG00005014358cpsf39884.808Maylandia_zebra
ENSLAFG00000009467CPSF39894.603ENSMGAG00000013995CPSF310094.603Meleagris_gallopavo
ENSLAFG00000009467CPSF35596.543ENSMAUG00000000166Cpsf310096.543Mesocricetus_auratus
ENSLAFG00000009467CPSF310092.059ENSMICG00000002363CPSF310092.812Microcebus_murinus
ENSLAFG00000009467CPSF310092.500ENSMOCG00000020067Cpsf39992.500Microtus_ochrogaster
ENSLAFG00000009467CPSF37377.500ENSMMOG00000011923CPSF38477.500Mola_mola
ENSLAFG00000009467CPSF39582.326ENSMMOG00000018212CPSF39882.326Mola_mola
ENSLAFG00000009467CPSF310095.197ENSMODG00000014703CPSF39995.197Monodelphis_domestica
ENSLAFG00000009467CPSF39985.103ENSMALG00000016416cpsf39885.103Monopterus_albus
ENSLAFG00000009467CPSF39383.438ENSMALG00000011474CPSF39983.438Monopterus_albus
ENSLAFG00000009467CPSF310096.765MGP_CAROLIEiJ_G0017640Cpsf39996.765Mus_caroli
ENSLAFG00000009467CPSF310096.765ENSMUSG00000054309Cpsf39996.765Mus_musculus
ENSLAFG00000009467CPSF310096.618MGP_PahariEiJ_G0029397Cpsf39996.618Mus_pahari
ENSLAFG00000009467CPSF310096.765MGP_SPRETEiJ_G0018481Cpsf39996.765Mus_spretus
ENSLAFG00000009467CPSF310097.206ENSMPUG00000013213CPSF39997.206Mustela_putorius_furo
ENSLAFG00000009467CPSF310096.916ENSMLUG00000010636CPSF39996.916Myotis_lucifugus
ENSLAFG00000009467CPSF310096.912ENSNGAG00000019836Cpsf39996.912Nannospalax_galili
ENSLAFG00000009467CPSF39286.508ENSNBRG00000010525CPSF39986.508Neolamprologus_brichardi
ENSLAFG00000009467CPSF39984.366ENSNBRG00000004770cpsf39884.366Neolamprologus_brichardi
ENSLAFG00000009467CPSF310097.647ENSNLEG00000013359CPSF310098.918Nomascus_leucogenys
ENSLAFG00000009467CPSF39566.563ENSMEUG00000013117-9466.563Notamacropus_eugenii
ENSLAFG00000009467CPSF310088.235ENSOPRG00000008902CPSF39988.235Ochotona_princeps
ENSLAFG00000009467CPSF310095.441ENSODEG00000003129CPSF39995.441Octodon_degus
ENSLAFG00000009467CPSF39984.956ENSONIG00000018812cpsf39884.956Oreochromis_niloticus
ENSLAFG00000009467CPSF38396.631ENSOANG00000008577CPSF310096.631Ornithorhynchus_anatinus
ENSLAFG00000009467CPSF310097.500ENSOCUG00000003728CPSF39997.500Oryctolagus_cuniculus
ENSLAFG00000009467CPSF39982.891ENSORLG00000018854cpsf39882.891Oryzias_latipes
ENSLAFG00000009467CPSF39982.743ENSORLG00020013331cpsf39882.743Oryzias_latipes_hni
ENSLAFG00000009467CPSF39982.891ENSORLG00015011017cpsf39882.891Oryzias_latipes_hsok
ENSLAFG00000009467CPSF39983.038ENSOMEG00000010647cpsf39483.038Oryzias_melastigma
ENSLAFG00000009467CPSF310087.794ENSOGAG00000001680CPSF39987.794Otolemur_garnettii
ENSLAFG00000009467CPSF310098.088ENSOARG00000015073CPSF39998.088Ovis_aries
ENSLAFG00000009467CPSF310097.794ENSPPAG00000042457CPSF39997.794Pan_paniscus
ENSLAFG00000009467CPSF310097.794ENSPPRG00000016790CPSF310099.073Panthera_pardus
ENSLAFG00000009467CPSF310097.794ENSPTIG00000003920CPSF310099.055Panthera_tigris_altaica
ENSLAFG00000009467CPSF310097.794ENSPTRG00000011638CPSF39997.794Pan_troglodytes
ENSLAFG00000009467CPSF310097.500ENSPANG00000016798CPSF39997.500Papio_anubis
ENSLAFG00000009467CPSF39988.348ENSPKIG00000023646cpsf39989.147Paramormyrops_kingsleyae
ENSLAFG00000009467CPSF39993.953ENSPSIG00000016144CPSF39993.953Pelodiscus_sinensis
ENSLAFG00000009467CPSF36079.259ENSPMGG00000015311CPSF39979.259Periophthalmus_magnuspinnatus
ENSLAFG00000009467CPSF38385.515ENSPMGG00000006141-9985.515Periophthalmus_magnuspinnatus
ENSLAFG00000009467CPSF310096.471ENSPEMG00000017668Cpsf39996.471Peromyscus_maniculatus_bairdii
ENSLAFG00000009467CPSF37889.326ENSPMAG00000004841cpsf39889.326Petromyzon_marinus
ENSLAFG00000009467CPSF39897.451ENSPCIG00000009823CPSF39897.546Phascolarctos_cinereus
ENSLAFG00000009467CPSF39986.726ENSPFOG00000010418-9886.726Poecilia_formosa
ENSLAFG00000009467CPSF39983.947ENSPFOG00000015922cpsf39883.947Poecilia_formosa
ENSLAFG00000009467CPSF35980.941ENSPLAG00000021300-9980.941Poecilia_latipinna
ENSLAFG00000009467CPSF39983.947ENSPLAG00000000882cpsf39883.947Poecilia_latipinna
ENSLAFG00000009467CPSF39984.094ENSPMEG00000018309cpsf39884.094Poecilia_mexicana
ENSLAFG00000009467CPSF39981.858ENSPREG00000004482CPSF39881.858Poecilia_reticulata
ENSLAFG00000009467CPSF39282.830ENSPREG00000014875cpsf39982.830Poecilia_reticulata
ENSLAFG00000009467CPSF310093.235ENSPPYG00000012666CPSF39993.235Pongo_abelii
ENSLAFG00000009467CPSF39066.069ENSPCAG00000015042CPSF39466.069Procavia_capensis
ENSLAFG00000009467CPSF39084.642ENSPCOG00000023016CPSF39984.642Propithecus_coquereli
ENSLAFG00000009467CPSF39997.640ENSPVAG00000005324CPSF39997.640Pteropus_vampyrus
ENSLAFG00000009467CPSF39984.808ENSPNYG00000004405cpsf39884.808Pundamilia_nyererei
ENSLAFG00000009467CPSF38091.344ENSPNYG00000021047CPSF39191.344Pundamilia_nyererei
ENSLAFG00000009467CPSF39986.156ENSPNAG00000023060cpsf39886.156Pygocentrus_nattereri
ENSLAFG00000009467CPSF39996.755ENSRNOG00000052418Cpsf39996.755Rattus_norvegicus
ENSLAFG00000009467CPSF310091.765ENSRBIG00000041615CPSF39994.436Rhinopithecus_bieti
ENSLAFG00000009467CPSF310097.794ENSRROG00000033792CPSF39899.100Rhinopithecus_roxellana
ENSLAFG00000009467CPSF39441.129YLR277CYSH19541.129Saccharomyces_cerevisiae
ENSLAFG00000009467CPSF39994.214ENSSBOG00000027263CPSF39894.214Saimiri_boliviensis_boliviensis
ENSLAFG00000009467CPSF310096.324ENSSHAG00000007024CPSF39996.324Sarcophilus_harrisii
ENSLAFG00000009467CPSF39988.807ENSSFOG00015002108cpsf39989.432Scleropages_formosus
ENSLAFG00000009467CPSF39586.553ENSSMAG00000020534CPSF39586.553Scophthalmus_maximus
ENSLAFG00000009467CPSF39984.661ENSSDUG00000002828cpsf39584.661Seriola_dumerili
ENSLAFG00000009467CPSF39986.892ENSSDUG00000018498CPSF39985.895Seriola_dumerili
ENSLAFG00000009467CPSF39986.892ENSSLDG00000005234CPSF39986.032Seriola_lalandi_dorsalis
ENSLAFG00000009467CPSF39984.661ENSSLDG00000008469cpsf39189.608Seriola_lalandi_dorsalis
ENSLAFG00000009467CPSF310079.853ENSSARG00000005186CPSF39979.853Sorex_araneus
ENSLAFG00000009467CPSF39992.160ENSSPUG00000015525CPSF39892.160Sphenodon_punctatus
ENSLAFG00000009467CPSF39984.389ENSSPAG00000018579cpsf39884.389Stegastes_partitus
ENSLAFG00000009467CPSF39986.598ENSSPAG00000002906CPSF39985.714Stegastes_partitus
ENSLAFG00000009467CPSF39997.791ENSSSCG00000020799CPSF39997.791Sus_scrofa
ENSLAFG00000009467CPSF310094.118ENSTGUG00000013016CPSF39994.118Taeniopygia_guttata
ENSLAFG00000009467CPSF35973.464ENSTRUG00000013905CPSF39973.464Takifugu_rubripes
ENSLAFG00000009467CPSF39983.947ENSTRUG00000007030cpsf39683.947Takifugu_rubripes
ENSLAFG00000009467CPSF38591.136ENSTBEG00000002707CPSF38491.136Tupaia_belangeri
ENSLAFG00000009467CPSF38898.387ENSTTRG00000000861CPSF38798.387Tursiops_truncatus
ENSLAFG00000009467CPSF39994.838ENSUAMG00000007535CPSF39794.838Ursus_americanus
ENSLAFG00000009467CPSF39599.227ENSUMAG00000003676CPSF310099.227Ursus_maritimus
ENSLAFG00000009467CPSF39395.899ENSVPAG00000008041CPSF310095.899Vicugna_pacos
ENSLAFG00000009467CPSF310097.941ENSVVUG00000002194CPSF39997.941Vulpes_vulpes
ENSLAFG00000009467CPSF39988.348ENSXETG00000008263cpsf39888.348Xenopus_tropicalis
ENSLAFG00000009467CPSF39983.947ENSXCOG00000019695cpsf39883.947Xiphophorus_couchianus
ENSLAFG00000009467CPSF35579.515ENSXCOG00000000957-8779.515Xiphophorus_couchianus
ENSLAFG00000009467CPSF39983.947ENSXMAG00000009784cpsf39984.520Xiphophorus_maculatus
ENSLAFG00000009467CPSF39987.021ENSXMAG00000027291CPSF39887.021Xiphophorus_maculatus

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