EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000009600 (Gene tree)
Gene ID: -
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 363 bases
Position: chrscaffold_34:15460491-15460853
Accession: 100665419
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000008053	LSM	PF01423.22	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000009597	LSM10-201	363	-	ENSLAFP00000008053	121 (aa)	XP_010593519	G3T416

Gene Model

Click here to download ENSLAFG00000009600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000009600's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000009600	LSM10	56	30.000	ENSLAFG00000016139	LSM2	74	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000009600	LSM10	100	91.057	ENSG00000181817	LSM10	100	91.057	Homo_sapiens
ENSLAFG00000009600	LSM10	100	93.496	ENSAMEG00000019854	LSM10	100	93.496	Ailuropoda_melanoleuca
ENSLAFG00000009600	LSM10	97	65.546	ENSACIG00000015420	oscp1a	79	65.546	Amphilophus_citrinellus
ENSLAFG00000009600	LSM10	95	64.957	ENSAOCG00000015607	LSM10	91	64.957	Amphiprion_ocellaris
ENSLAFG00000009600	LSM10	93	69.565	ENSAOCG00000014654	-	95	69.565	Amphiprion_ocellaris
ENSLAFG00000009600	LSM10	93	69.565	ENSAOCG00000015618	LSM10	95	69.565	Amphiprion_ocellaris
ENSLAFG00000009600	LSM10	95	64.957	ENSAPEG00000021851	LSM10	91	64.957	Amphiprion_percula
ENSLAFG00000009600	LSM10	93	69.565	ENSAPEG00000021845	-	95	69.565	Amphiprion_percula
ENSLAFG00000009600	LSM10	88	64.486	ENSATEG00000006310	oscp1a	79	64.486	Anabas_testudineus
ENSLAFG00000009600	LSM10	100	65.854	ENSACAG00000001231	LSM10	100	65.854	Anolis_carolinensis
ENSLAFG00000009600	LSM10	100	91.870	ENSANAG00000018759	-	100	91.870	Aotus_nancymaae
ENSLAFG00000009600	LSM10	98	90.909	ENSANAG00000031489	-	99	90.909	Aotus_nancymaae
ENSLAFG00000009600	LSM10	94	67.241	ENSACLG00000004728	oscp1a	94	67.241	Astatotilapia_calliptera
ENSLAFG00000009600	LSM10	96	66.667	ENSAMXG00000025301	oscp1a	98	66.667	Astyanax_mexicanus
ENSLAFG00000009600	LSM10	98	92.562	ENSBTAG00000024096	LSM10	99	92.562	Bos_taurus
ENSLAFG00000009600	LSM10	100	91.057	ENSCJAG00000044880	LSM10	100	91.057	Callithrix_jacchus
ENSLAFG00000009600	LSM10	100	95.122	ENSCAFG00000003382	LSM10	100	95.122	Canis_familiaris
ENSLAFG00000009600	LSM10	100	95.122	ENSCAFG00020008920	LSM10	100	95.122	Canis_lupus_dingo
ENSLAFG00000009600	LSM10	98	92.562	ENSCHIG00000009398	LSM10	99	92.562	Capra_hircus
ENSLAFG00000009600	LSM10	100	91.870	ENSCAPG00000012567	LSM10	100	91.870	Cavia_aperea
ENSLAFG00000009600	LSM10	100	91.870	ENSCPOG00000039302	LSM10	100	91.870	Cavia_porcellus
ENSLAFG00000009600	LSM10	100	91.870	ENSCCAG00000018913	-	100	91.870	Cebus_capucinus
ENSLAFG00000009600	LSM10	98	90.909	ENSCCAG00000008378	-	98	90.909	Cebus_capucinus
ENSLAFG00000009600	LSM10	100	93.496	ENSCATG00000006589	LSM10	100	93.496	Cercocebus_atys
ENSLAFG00000009600	LSM10	100	94.309	ENSCLAG00000008633	LSM10	100	94.309	Chinchilla_lanigera
ENSLAFG00000009600	LSM10	100	93.496	ENSCSAG00000000134	LSM10	100	93.496	Chlorocebus_sabaeus
ENSLAFG00000009600	LSM10	100	90.400	ENSCHOG00000008615	LSM10	100	90.400	Choloepus_hoffmanni
ENSLAFG00000009600	LSM10	84	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSLAFG00000009600	LSM10	100	93.496	ENSCANG00000019928	LSM10	100	93.496	Colobus_angolensis_palliatus
ENSLAFG00000009600	LSM10	93	84.483	ENSCGRG00001022673	-	93	84.483	Cricetulus_griseus_chok1gshd
ENSLAFG00000009600	LSM10	98	95.000	ENSCGRG00001004317	-	98	95.000	Cricetulus_griseus_chok1gshd
ENSLAFG00000009600	LSM10	93	84.483	ENSCGRG00000015514	-	93	84.483	Cricetulus_griseus_crigri
ENSLAFG00000009600	LSM10	98	95.000	ENSCGRG00000014935	-	98	95.000	Cricetulus_griseus_crigri
ENSLAFG00000009600	LSM10	94	63.793	ENSCSEG00000010374	oscp1a	77	64.348	Cynoglossus_semilaevis
ENSLAFG00000009600	LSM10	98	66.102	ENSCVAG00000001536	oscp1a	91	66.102	Cyprinodon_variegatus
ENSLAFG00000009600	LSM10	70	71.765	ENSDARG00000109563	CABZ01074453.1	99	71.765	Danio_rerio
ENSLAFG00000009600	LSM10	98	72.269	ENSDARG00000101222	oscp1a	99	72.269	Danio_rerio
ENSLAFG00000009600	LSM10	99	94.262	ENSDNOG00000036662	LSM10	99	94.262	Dasypus_novemcinctus
ENSLAFG00000009600	LSM10	100	93.496	ENSDORG00000007579	Lsm10	100	93.496	Dipodomys_ordii
ENSLAFG00000009600	LSM10	100	95.041	ENSETEG00000005703	LSM10	100	95.041	Echinops_telfairi
ENSLAFG00000009600	LSM10	95	53.782	ENSEBUG00000001312	oscp1a	96	53.782	Eptatretus_burgeri
ENSLAFG00000009600	LSM10	100	94.309	ENSEASG00005012194	LSM10	100	94.309	Equus_asinus_asinus
ENSLAFG00000009600	LSM10	100	95.122	ENSECAG00000005071	LSM10	100	95.122	Equus_caballus
ENSLAFG00000009600	LSM10	100	92.683	ENSEEUG00000012032	LSM10	100	92.683	Erinaceus_europaeus
ENSLAFG00000009600	LSM10	98	66.942	ENSELUG00000007452	oscp1a	99	66.942	Esox_lucius
ENSLAFG00000009600	LSM10	100	69.106	ENSFALG00000000851	LSM10	100	69.106	Ficedula_albicollis
ENSLAFG00000009600	LSM10	100	91.057	ENSFDAG00000021056	LSM10	100	91.057	Fukomys_damarensis
ENSLAFG00000009600	LSM10	88	67.273	ENSFHEG00000001058	oscp1a	95	67.273	Fundulus_heteroclitus
ENSLAFG00000009600	LSM10	88	66.981	ENSGMOG00000019832	oscp1a	89	66.981	Gadus_morhua
ENSLAFG00000009600	LSM10	100	72.358	ENSGALG00000002127	LSM10	100	72.358	Gallus_gallus
ENSLAFG00000009600	LSM10	95	59.167	ENSGAFG00000016445	oscp1a	96	59.167	Gambusia_affinis
ENSLAFG00000009600	LSM10	94	64.655	ENSGACG00000002329	oscp1a	95	64.655	Gasterosteus_aculeatus
ENSLAFG00000009600	LSM10	100	73.171	ENSGAGG00000024848	LSM10	100	73.171	Gopherus_agassizii
ENSLAFG00000009600	LSM10	100	92.683	ENSGGOG00000003556	LSM10	100	92.683	Gorilla_gorilla
ENSLAFG00000009600	LSM10	94	67.241	ENSHBUG00000001722	oscp1a	94	67.241	Haplochromis_burtoni
ENSLAFG00000009600	LSM10	100	91.870	ENSHGLG00000011625	LSM10	100	91.870	Heterocephalus_glaber_female
ENSLAFG00000009600	LSM10	100	91.870	ENSHGLG00100001769	LSM10	100	91.870	Heterocephalus_glaber_male
ENSLAFG00000009600	LSM10	93	65.487	ENSIPUG00000005808	oscp1a	98	65.487	Ictalurus_punctatus
ENSLAFG00000009600	LSM10	100	95.122	ENSSTOG00000000606	LSM10	100	95.122	Ictidomys_tridecemlineatus
ENSLAFG00000009600	LSM10	94	64.655	ENSKMAG00000012143	oscp1a	96	64.655	Kryptolebias_marmoratus
ENSLAFG00000009600	LSM10	98	64.167	ENSLBEG00000017764	oscp1a	98	64.167	Labrus_bergylta
ENSLAFG00000009600	LSM10	100	73.984	ENSLACG00000015904	LSM10	95	73.984	Latimeria_chalumnae
ENSLAFG00000009600	LSM10	98	70.833	ENSLOCG00000018277	oscp1a	98	70.833	Lepisosteus_oculatus
ENSLAFG00000009600	LSM10	100	93.496	ENSMFAG00000009115	LSM10	100	93.496	Macaca_fascicularis
ENSLAFG00000009600	LSM10	100	93.496	ENSMMUG00000017338	LSM10	100	93.496	Macaca_mulatta
ENSLAFG00000009600	LSM10	100	93.496	ENSMNEG00000020023	LSM10	100	93.496	Macaca_nemestrina
ENSLAFG00000009600	LSM10	100	93.496	ENSMLEG00000025150	LSM10	100	93.496	Mandrillus_leucophaeus
ENSLAFG00000009600	LSM10	98	63.636	ENSMAMG00000004427	oscp1a	99	63.636	Mastacembelus_armatus
ENSLAFG00000009600	LSM10	94	67.241	ENSMZEG00005026307	oscp1a	94	67.241	Maylandia_zebra
ENSLAFG00000009600	LSM10	100	71.545	ENSMGAG00000015707	LSM10	100	71.545	Meleagris_gallopavo
ENSLAFG00000009600	LSM10	98	93.333	ENSMAUG00000016624	Lsm10	98	93.333	Mesocricetus_auratus
ENSLAFG00000009600	LSM10	98	94.167	ENSMOCG00000021943	Lsm10	98	94.167	Microtus_ochrogaster
ENSLAFG00000009600	LSM10	94	64.103	ENSMMOG00000013597	oscp1a	87	64.103	Mola_mola
ENSLAFG00000009600	LSM10	100	82.927	ENSMODG00000023328	LSM10	100	82.927	Monodelphis_domestica
ENSLAFG00000009600	LSM10	57	59.459	ENSMALG00000012661	oscp1a	58	59.459	Monopterus_albus
ENSLAFG00000009600	LSM10	98	94.167	MGP_CAROLIEiJ_G0026467	Lsm10	100	95.699	Mus_caroli
ENSLAFG00000009600	LSM10	98	95.000	ENSMUSG00000050188	Lsm10	100	96.774	Mus_musculus
ENSLAFG00000009600	LSM10	98	95.000	MGP_PahariEiJ_G0028798	Lsm10	100	96.774	Mus_pahari
ENSLAFG00000009600	LSM10	98	95.000	MGP_SPRETEiJ_G0027446	Lsm10	100	96.774	Mus_spretus
ENSLAFG00000009600	LSM10	100	95.122	ENSMPUG00000018593	LSM10	100	95.122	Mustela_putorius_furo
ENSLAFG00000009600	LSM10	100	89.431	ENSMLUG00000023895	LSM10	100	89.431	Myotis_lucifugus
ENSLAFG00000009600	LSM10	100	95.935	ENSNGAG00000015011	Lsm10	100	95.935	Nannospalax_galili
ENSLAFG00000009600	LSM10	94	68.103	ENSNBRG00000014306	oscp1a	94	68.103	Neolamprologus_brichardi
ENSLAFG00000009600	LSM10	100	92.683	ENSNLEG00000033754	LSM10	100	92.683	Nomascus_leucogenys
ENSLAFG00000009600	LSM10	100	82.927	ENSMEUG00000006313	LSM10	100	82.927	Notamacropus_eugenii
ENSLAFG00000009600	LSM10	100	91.057	ENSOPRG00000001699	LSM10	100	91.057	Ochotona_princeps
ENSLAFG00000009600	LSM10	100	94.309	ENSODEG00000019161	LSM10	100	94.309	Octodon_degus
ENSLAFG00000009600	LSM10	94	68.103	ENSONIG00000020904	oscp1a	95	68.103	Oreochromis_niloticus
ENSLAFG00000009600	LSM10	100	75.610	ENSOANG00000002066	LSM10	100	75.610	Ornithorhynchus_anatinus
ENSLAFG00000009600	LSM10	100	88.618	ENSOCUG00000005333	LSM10	100	88.618	Oryctolagus_cuniculus
ENSLAFG00000009600	LSM10	95	64.957	ENSORLG00000009504	oscp1a	97	64.957	Oryzias_latipes
ENSLAFG00000009600	LSM10	95	64.957	ENSORLG00020016201	oscp1a	97	64.957	Oryzias_latipes_hni
ENSLAFG00000009600	LSM10	94	67.544	ENSORLG00015007794	oscp1a	96	67.544	Oryzias_latipes_hsok
ENSLAFG00000009600	LSM10	100	94.309	ENSOGAG00000002653	LSM10	100	94.309	Otolemur_garnettii
ENSLAFG00000009600	LSM10	98	92.562	ENSOARG00000009596	LSM10	99	92.562	Ovis_aries
ENSLAFG00000009600	LSM10	100	91.057	ENSPPAG00000023465	LSM10	100	91.057	Pan_paniscus
ENSLAFG00000009600	LSM10	100	94.309	ENSPPRG00000014619	LSM10	100	94.309	Panthera_pardus
ENSLAFG00000009600	LSM10	100	94.309	ENSPTIG00000004613	LSM10	100	94.309	Panthera_tigris_altaica
ENSLAFG00000009600	LSM10	100	91.057	ENSPTRG00000000539	LSM10	100	91.057	Pan_troglodytes
ENSLAFG00000009600	LSM10	100	93.496	ENSPANG00000023172	LSM10	100	93.496	Papio_anubis
ENSLAFG00000009600	LSM10	98	65.000	ENSPKIG00000003728	oscp1a	97	65.000	Paramormyrops_kingsleyae
ENSLAFG00000009600	LSM10	100	72.358	ENSPSIG00000000590	LSM10	100	72.358	Pelodiscus_sinensis
ENSLAFG00000009600	LSM10	63	64.474	ENSPMGG00000015718	oscp1a	99	64.474	Periophthalmus_magnuspinnatus
ENSLAFG00000009600	LSM10	85	85.437	ENSPCIG00000014865	LSM10	76	85.437	Phascolarctos_cinereus
ENSLAFG00000009600	LSM10	91	66.964	ENSPFOG00000020490	oscp1a	95	66.964	Poecilia_formosa
ENSLAFG00000009600	LSM10	96	65.254	ENSPLAG00000016537	oscp1a	89	65.254	Poecilia_latipinna
ENSLAFG00000009600	LSM10	93	66.667	ENSPMEG00000000174	oscp1a	98	66.667	Poecilia_mexicana
ENSLAFG00000009600	LSM10	96	65.254	ENSPREG00000009899	oscp1a	89	65.254	Poecilia_reticulata
ENSLAFG00000009600	LSM10	100	91.870	ENSPPYG00000001539	LSM10	100	91.870	Pongo_abelii
ENSLAFG00000009600	LSM10	100	96.694	ENSPCAG00000002520	LSM10	100	96.694	Procavia_capensis
ENSLAFG00000009600	LSM10	100	90.244	ENSPVAG00000008644	LSM10	100	90.244	Pteropus_vampyrus
ENSLAFG00000009600	LSM10	94	67.241	ENSPNYG00000003138	oscp1a	94	67.241	Pundamilia_nyererei
ENSLAFG00000009600	LSM10	95	65.517	ENSPNAG00000028829	oscp1a	97	65.517	Pygocentrus_nattereri
ENSLAFG00000009600	LSM10	98	95.833	ENSRNOG00000025716	Lsm10	98	95.833	Rattus_norvegicus
ENSLAFG00000009600	LSM10	100	93.496	ENSRBIG00000001561	LSM10	100	93.496	Rhinopithecus_bieti
ENSLAFG00000009600	LSM10	100	93.496	ENSRROG00000011414	LSM10	100	93.496	Rhinopithecus_roxellana
ENSLAFG00000009600	LSM10	100	91.870	ENSSBOG00000036413	-	100	91.870	Saimiri_boliviensis_boliviensis
ENSLAFG00000009600	LSM10	100	82.114	ENSSHAG00000018056	LSM10	100	82.114	Sarcophilus_harrisii
ENSLAFG00000009600	LSM10	98	64.463	ENSSFOG00015019954	lsm10	99	64.463	Scleropages_formosus
ENSLAFG00000009600	LSM10	93	66.087	ENSSMAG00000001297	oscp1a	98	66.087	Scophthalmus_maximus
ENSLAFG00000009600	LSM10	95	64.957	ENSSDUG00000007090	oscp1a	95	64.957	Seriola_dumerili
ENSLAFG00000009600	LSM10	95	65.812	ENSSLDG00000000800	oscp1a	97	65.812	Seriola_lalandi_dorsalis
ENSLAFG00000009600	LSM10	100	90.400	ENSSARG00000004211	LSM10	100	91.200	Sorex_araneus
ENSLAFG00000009600	LSM10	94	66.379	ENSSPAG00000009229	oscp1a	96	66.379	Stegastes_partitus
ENSLAFG00000009600	LSM10	100	93.388	ENSSSCG00000038916	LSM10	100	93.388	Sus_scrofa
ENSLAFG00000009600	LSM10	99	69.672	ENSTGUG00000001602	-	100	69.672	Taeniopygia_guttata
ENSLAFG00000009600	LSM10	99	69.672	ENSTGUG00000001600	-	100	69.672	Taeniopygia_guttata
ENSLAFG00000009600	LSM10	93	67.826	ENSTRUG00000010531	oscp1a	93	67.826	Takifugu_rubripes
ENSLAFG00000009600	LSM10	100	92.683	ENSTBEG00000016674	LSM10	100	92.683	Tupaia_belangeri
ENSLAFG00000009600	LSM10	100	92.683	ENSUAMG00000020265	LSM10	100	92.683	Ursus_americanus
ENSLAFG00000009600	LSM10	100	92.683	ENSUMAG00000001438	LSM10	57	92.683	Ursus_maritimus
ENSLAFG00000009600	LSM10	100	95.122	ENSVVUG00000023209	LSM10	100	95.122	Vulpes_vulpes
ENSLAFG00000009600	LSM10	100	70.248	ENSXETG00000027631	lsm10	100	70.248	Xenopus_tropicalis
ENSLAFG00000009600	LSM10	94	62.931	ENSXCOG00000018776	oscp1a	79	60.000	Xiphophorus_couchianus
ENSLAFG00000009600	LSM10	95	62.500	ENSXMAG00000019963	oscp1a	96	62.500	Xiphophorus_maculatus