EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000009796 (Gene tree)
Gene ID: -
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 52442 bases
Position: chrscaffold_3:76738845-76791286
Accession: 23207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000008217	Rif1_N	PF12231.8	9.8e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000009803	RIF1-201	7323	-	ENSLAFP00000008217	2441 (aa)	-	G3T4D9

Gene Model

Click here to download ENSLAFG00000009796's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000009796's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000009796	RIF1	100	78.235	ENSG00000080345	RIF1	97	87.956	Homo_sapiens
ENSLAFG00000009796	RIF1	100	79.382	ENSAMEG00000008461	RIF1	100	79.382	Ailuropoda_melanoleuca
ENSLAFG00000009796	RIF1	68	51.389	ENSACIG00000017765	rif1	74	51.389	Amphilophus_citrinellus
ENSLAFG00000009796	RIF1	67	49.644	ENSAOCG00000017231	rif1	50	49.644	Amphiprion_ocellaris
ENSLAFG00000009796	RIF1	66	54.126	ENSAPEG00000013228	rif1	53	53.682	Amphiprion_percula
ENSLAFG00000009796	RIF1	53	49.466	ENSATEG00000022887	rif1	56	48.162	Anabas_testudineus
ENSLAFG00000009796	RIF1	90	55.668	ENSAPLG00000007092	RIF1	97	55.780	Anas_platyrhynchos
ENSLAFG00000009796	RIF1	84	58.434	ENSACAG00000003714	RIF1	89	58.434	Anolis_carolinensis
ENSLAFG00000009796	RIF1	100	76.988	ENSANAG00000024840	RIF1	99	76.988	Aotus_nancymaae
ENSLAFG00000009796	RIF1	51	49.960	ENSAMXG00000010910	rif1	52	50.157	Astyanax_mexicanus
ENSLAFG00000009796	RIF1	94	76.797	ENSBTAG00000021020	RIF1	99	76.797	Bos_taurus
ENSLAFG00000009796	RIF1	100	76.532	ENSCJAG00000003138	RIF1	99	76.532	Callithrix_jacchus
ENSLAFG00000009796	RIF1	100	76.501	ENSCAFG00000005670	RIF1	97	76.622	Canis_familiaris
ENSLAFG00000009796	RIF1	100	76.523	ENSCAFG00020016401	RIF1	99	76.645	Canis_lupus_dingo
ENSLAFG00000009796	RIF1	100	76.613	ENSCHIG00000020327	RIF1	99	76.613	Capra_hircus
ENSLAFG00000009796	RIF1	99	74.436	ENSTSYG00000008861	RIF1	100	74.678	Carlito_syrichta
ENSLAFG00000009796	RIF1	80	75.231	ENSCAPG00000008957	RIF1	96	66.667	Cavia_aperea
ENSLAFG00000009796	RIF1	100	69.535	ENSCPOG00000037898	RIF1	99	69.697	Cavia_porcellus
ENSLAFG00000009796	RIF1	100	75.635	ENSCCAG00000024760	RIF1	99	75.635	Cebus_capucinus
ENSLAFG00000009796	RIF1	100	78.122	ENSCATG00000033353	RIF1	99	78.122	Cercocebus_atys
ENSLAFG00000009796	RIF1	96	72.218	ENSCLAG00000001517	RIF1	99	72.218	Chinchilla_lanigera
ENSLAFG00000009796	RIF1	100	78.194	ENSCSAG00000016089	RIF1	99	78.194	Chlorocebus_sabaeus
ENSLAFG00000009796	RIF1	97	76.522	ENSCHOG00000007187	RIF1	97	76.522	Choloepus_hoffmanni
ENSLAFG00000009796	RIF1	87	74.474	ENSCPBG00000025885	RIF1	93	74.474	Chrysemys_picta_bellii
ENSLAFG00000009796	RIF1	100	76.753	ENSCANG00000028962	RIF1	100	77.366	Colobus_angolensis_palliatus
ENSLAFG00000009796	RIF1	100	68.600	ENSCGRG00001024589	Rif1	100	68.682	Cricetulus_griseus_chok1gshd
ENSLAFG00000009796	RIF1	99	69.417	ENSCGRG00000010713	Rif1	100	69.499	Cricetulus_griseus_crigri
ENSLAFG00000009796	RIF1	62	59.130	ENSCSEG00000003945	rif1	65	59.130	Cynoglossus_semilaevis
ENSLAFG00000009796	RIF1	64	48.419	ENSCVAG00000022479	rif1	69	48.419	Cyprinodon_variegatus
ENSLAFG00000009796	RIF1	65	50.664	ENSDARG00000062650	rif1	53	50.778	Danio_rerio
ENSLAFG00000009796	RIF1	99	77.306	ENSDNOG00000011194	RIF1	97	77.306	Dasypus_novemcinctus
ENSLAFG00000009796	RIF1	92	77.955	ENSETEG00000012421	RIF1	91	77.955	Echinops_telfairi
ENSLAFG00000009796	RIF1	95	88.462	ENSEASG00005023434	RIF1	99	88.462	Equus_asinus_asinus
ENSLAFG00000009796	RIF1	96	89.124	ENSECAG00000012679	RIF1	99	89.124	Equus_caballus
ENSLAFG00000009796	RIF1	63	51.245	ENSELUG00000006826	rif1	56	51.315	Esox_lucius
ENSLAFG00000009796	RIF1	100	76.892	ENSFCAG00000029742	RIF1	99	76.892	Felis_catus
ENSLAFG00000009796	RIF1	78	58.021	ENSFALG00000013874	RIF1	97	52.125	Ficedula_albicollis
ENSLAFG00000009796	RIF1	100	73.797	ENSFDAG00000006538	RIF1	99	73.808	Fukomys_damarensis
ENSLAFG00000009796	RIF1	63	50.040	ENSFHEG00000013721	rif1	66	49.147	Fundulus_heteroclitus
ENSLAFG00000009796	RIF1	56	52.500	ENSGMOG00000003517	rif1	85	52.500	Gadus_morhua
ENSLAFG00000009796	RIF1	79	65.257	ENSGALG00000012484	RIF1	91	65.559	Gallus_gallus
ENSLAFG00000009796	RIF1	62	54.651	ENSGAFG00000017196	rif1	69	54.414	Gambusia_affinis
ENSLAFG00000009796	RIF1	60	54.065	ENSGACG00000008579	rif1	66	54.251	Gasterosteus_aculeatus
ENSLAFG00000009796	RIF1	87	74.320	ENSGAGG00000012595	RIF1	94	74.320	Gopherus_agassizii
ENSLAFG00000009796	RIF1	90	88.857	ENSGGOG00000040178	RIF1	96	88.857	Gorilla_gorilla
ENSLAFG00000009796	RIF1	95	73.072	ENSHGLG00100009807	RIF1	99	73.072	Heterocephalus_glaber_male
ENSLAFG00000009796	RIF1	64	49.960	ENSHCOG00000015943	rif1	60	50.000	Hippocampus_comes
ENSLAFG00000009796	RIF1	50	52.100	ENSIPUG00000021703	rif1	50	52.167	Ictalurus_punctatus
ENSLAFG00000009796	RIF1	100	75.482	ENSSTOG00000020712	RIF1	99	75.592	Ictidomys_tridecemlineatus
ENSLAFG00000009796	RIF1	99	68.978	ENSJJAG00000023000	Rif1	100	69.059	Jaculus_jaculus
ENSLAFG00000009796	RIF1	51	49.685	ENSKMAG00000002852	rif1	53	49.685	Kryptolebias_marmoratus
ENSLAFG00000009796	RIF1	65	50.038	ENSLBEG00000023196	rif1	60	50.038	Labrus_bergylta
ENSLAFG00000009796	RIF1	88	54.087	ENSLACG00000005425	RIF1	92	55.529	Latimeria_chalumnae
ENSLAFG00000009796	RIF1	64	54.396	ENSLOCG00000002657	rif1	82	52.733	Lepisosteus_oculatus
ENSLAFG00000009796	RIF1	100	78.042	ENSMFAG00000032233	RIF1	99	78.042	Macaca_fascicularis
ENSLAFG00000009796	RIF1	100	78.082	ENSMMUG00000008611	RIF1	99	78.082	Macaca_mulatta
ENSLAFG00000009796	RIF1	100	77.921	ENSMNEG00000031616	RIF1	99	77.921	Macaca_nemestrina
ENSLAFG00000009796	RIF1	100	78.042	ENSMLEG00000042945	RIF1	99	78.042	Mandrillus_leucophaeus
ENSLAFG00000009796	RIF1	65	49.294	ENSMAMG00000001745	rif1	65	49.608	Mastacembelus_armatus
ENSLAFG00000009796	RIF1	65	51.537	ENSMZEG00005020920	rif1	69	51.537	Maylandia_zebra
ENSLAFG00000009796	RIF1	84	60.393	ENSMGAG00000012732	RIF1	91	61.299	Meleagris_gallopavo
ENSLAFG00000009796	RIF1	95	85.515	ENSMAUG00000013158	Rif1	99	85.515	Mesocricetus_auratus
ENSLAFG00000009796	RIF1	100	79.460	ENSMICG00000046127	RIF1	99	79.460	Microcebus_murinus
ENSLAFG00000009796	RIF1	100	68.742	ENSMOCG00000009381	Rif1	100	68.877	Microtus_ochrogaster
ENSLAFG00000009796	RIF1	50	49.558	ENSMMOG00000006519	rif1	51	49.558	Mola_mola
ENSLAFG00000009796	RIF1	100	60.555	ENSMODG00000003703	RIF1	99	60.635	Monodelphis_domestica
ENSLAFG00000009796	RIF1	65	48.297	ENSMALG00000016759	rif1	74	48.452	Monopterus_albus
ENSLAFG00000009796	RIF1	100	67.777	MGP_CAROLIEiJ_G0023555	Rif1	100	67.859	Mus_caroli
ENSLAFG00000009796	RIF1	100	68.462	ENSMUSG00000036202	Rif1	100	68.543	Mus_musculus
ENSLAFG00000009796	RIF1	100	66.992	MGP_PahariEiJ_G0025006	Rif1	100	67.073	Mus_pahari
ENSLAFG00000009796	RIF1	100	68.127	MGP_SPRETEiJ_G0024476	Rif1	100	68.127	Mus_spretus
ENSLAFG00000009796	RIF1	100	77.527	ENSMPUG00000000371	RIF1	99	77.527	Mustela_putorius_furo
ENSLAFG00000009796	RIF1	90	74.237	ENSMLUG00000003376	RIF1	100	74.119	Myotis_lucifugus
ENSLAFG00000009796	RIF1	100	71.110	ENSNGAG00000009268	Rif1	99	71.110	Nannospalax_galili
ENSLAFG00000009796	RIF1	63	51.255	ENSNBRG00000014257	rif1	69	50.549	Neolamprologus_brichardi
ENSLAFG00000009796	RIF1	100	76.124	ENSNLEG00000010955	RIF1	99	76.154	Nomascus_leucogenys
ENSLAFG00000009796	RIF1	75	78.924	ENSMEUG00000007601	-	81	78.924	Notamacropus_eugenii
ENSLAFG00000009796	RIF1	100	70.376	ENSODEG00000003950	RIF1	99	70.660	Octodon_degus
ENSLAFG00000009796	RIF1	52	50.703	ENSONIG00000013657	rif1	59	50.546	Oreochromis_niloticus
ENSLAFG00000009796	RIF1	73	74.765	ENSOANG00000006078	-	77	74.765	Ornithorhynchus_anatinus
ENSLAFG00000009796	RIF1	100	74.929	ENSOCUG00000017435	RIF1	99	75.020	Oryctolagus_cuniculus
ENSLAFG00000009796	RIF1	63	48.555	ENSORLG00020001302	rif1	67	48.757	Oryzias_latipes_hni
ENSLAFG00000009796	RIF1	63	48.757	ENSORLG00015000009	rif1	67	48.837	Oryzias_latipes_hsok
ENSLAFG00000009796	RIF1	62	49.394	ENSOMEG00000021513	rif1	67	49.398	Oryzias_melastigma
ENSLAFG00000009796	RIF1	100	76.433	ENSOGAG00000006141	RIF1	99	76.433	Otolemur_garnettii
ENSLAFG00000009796	RIF1	100	77.392	ENSOARG00000008930	RIF1	99	77.392	Ovis_aries
ENSLAFG00000009796	RIF1	100	78.091	ENSPPAG00000023754	RIF1	99	78.091	Pan_paniscus
ENSLAFG00000009796	RIF1	100	76.973	ENSPPRG00000003618	RIF1	99	76.973	Panthera_pardus
ENSLAFG00000009796	RIF1	100	77.013	ENSPTIG00000020652	RIF1	99	77.013	Panthera_tigris_altaica
ENSLAFG00000009796	RIF1	100	78.091	ENSPTRG00000012534	RIF1	99	78.091	Pan_troglodytes
ENSLAFG00000009796	RIF1	100	78.082	ENSPANG00000008525	RIF1	99	78.082	Papio_anubis
ENSLAFG00000009796	RIF1	63	47.006	ENSPMGG00000016141	rif1	75	46.645	Periophthalmus_magnuspinnatus
ENSLAFG00000009796	RIF1	99	70.305	ENSPEMG00000000446	Rif1	99	70.305	Peromyscus_maniculatus_bairdii
ENSLAFG00000009796	RIF1	100	59.133	ENSPCIG00000009185	RIF1	99	59.566	Phascolarctos_cinereus
ENSLAFG00000009796	RIF1	66	51.174	ENSPFOG00000017804	rif1	69	51.174	Poecilia_formosa
ENSLAFG00000009796	RIF1	59	51.403	ENSPFOG00000000554	-	67	51.403	Poecilia_formosa
ENSLAFG00000009796	RIF1	66	50.990	ENSPLAG00000017945	rif1	72	50.990	Poecilia_latipinna
ENSLAFG00000009796	RIF1	54	50.192	ENSPMEG00000006897	-	65	50.192	Poecilia_mexicana
ENSLAFG00000009796	RIF1	66	51.102	ENSPREG00000018052	rif1	69	54.348	Poecilia_reticulata
ENSLAFG00000009796	RIF1	100	78.235	ENSPPYG00000012846	RIF1	99	78.252	Pongo_abelii
ENSLAFG00000009796	RIF1	80	91.176	ENSPCAG00000009032	RIF1	80	91.176	Procavia_capensis
ENSLAFG00000009796	RIF1	100	79.147	ENSPCOG00000027888	RIF1	99	79.147	Propithecus_coquereli
ENSLAFG00000009796	RIF1	93	87.830	ENSPVAG00000014276	RIF1	95	87.830	Pteropus_vampyrus
ENSLAFG00000009796	RIF1	65	49.487	ENSPNYG00000012940	rif1	68	49.487	Pundamilia_nyererei
ENSLAFG00000009796	RIF1	66	51.227	ENSPNAG00000016685	rif1	67	51.413	Pygocentrus_nattereri
ENSLAFG00000009796	RIF1	100	67.086	ENSRNOG00000054901	Rif1	100	67.086	Rattus_norvegicus
ENSLAFG00000009796	RIF1	100	77.106	ENSRBIG00000003704	RIF1	99	77.124	Rhinopithecus_bieti
ENSLAFG00000009796	RIF1	100	77.872	ENSRROG00000028206	RIF1	99	77.890	Rhinopithecus_roxellana
ENSLAFG00000009796	RIF1	97	83.871	ENSSBOG00000029530	RIF1	99	83.871	Saimiri_boliviensis_boliviensis
ENSLAFG00000009796	RIF1	100	59.453	ENSSHAG00000018552	RIF1	100	58.656	Sarcophilus_harrisii
ENSLAFG00000009796	RIF1	66	52.688	ENSSFOG00015021539	rif1	75	51.098	Scleropages_formosus
ENSLAFG00000009796	RIF1	65	49.300	ENSSMAG00000011704	rif1	63	49.085	Scophthalmus_maximus
ENSLAFG00000009796	RIF1	63	51.491	ENSSDUG00000015632	rif1	71	50.668	Seriola_dumerili
ENSLAFG00000009796	RIF1	50	51.559	ENSSLDG00000019531	rif1	51	50.701	Seriola_lalandi_dorsalis
ENSLAFG00000009796	RIF1	63	81.356	ENSSARG00000007161	-	61	81.356	Sorex_araneus
ENSLAFG00000009796	RIF1	89	57.763	ENSSPUG00000003062	RIF1	96	58.904	Sphenodon_punctatus
ENSLAFG00000009796	RIF1	52	58.607	ENSSPAG00000018359	rif1	78	58.607	Stegastes_partitus
ENSLAFG00000009796	RIF1	100	77.106	ENSSSCG00000016395	RIF1	99	77.469	Sus_scrofa
ENSLAFG00000009796	RIF1	66	49.920	ENSTRUG00000015808	rif1	71	49.920	Takifugu_rubripes
ENSLAFG00000009796	RIF1	66	49.759	ENSTNIG00000011538	rif1	70	49.759	Tetraodon_nigroviridis
ENSLAFG00000009796	RIF1	83	88.535	ENSTBEG00000016082	RIF1	81	88.535	Tupaia_belangeri
ENSLAFG00000009796	RIF1	100	78.733	ENSTTRG00000011190	RIF1	99	78.733	Tursiops_truncatus
ENSLAFG00000009796	RIF1	90	77.579	ENSUAMG00000026385	RIF1	99	77.579	Ursus_americanus
ENSLAFG00000009796	RIF1	96	86.368	ENSUMAG00000000337	RIF1	99	86.368	Ursus_maritimus
ENSLAFG00000009796	RIF1	100	75.797	ENSVPAG00000002162	RIF1	99	75.797	Vicugna_pacos
ENSLAFG00000009796	RIF1	100	77.011	ENSVVUG00000011293	RIF1	99	77.011	Vulpes_vulpes
ENSLAFG00000009796	RIF1	66	48.549	ENSXMAG00000000506	rif1	67	48.903	Xiphophorus_maculatus