EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000010407 (Gene tree)
Gene ID: -
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 87096 bases
Position: chrscaffold_13:23572268-23659363
Accession: 100669000
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000008721	Npa1	PF11707.8	4.6e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000010415	URB1-201	6828	XM_023548464	ENSLAFP00000008721	2276 (aa)	XP_023404232	G3T5K6

Gene Model

Click here to download ENSLAFG00000010407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000010407's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000010407	URB1	99	78.980	ENSG00000142207	URB1	99	78.860	Homo_sapiens
ENSLAFG00000010407	URB1	99	43.239	ENSAPOG00000020308	urb1	99	47.704	Acanthochromis_polyacanthus
ENSLAFG00000010407	URB1	99	78.183	ENSAMEG00000011998	URB1	99	78.227	Ailuropoda_melanoleuca
ENSLAFG00000010407	URB1	95	44.824	ENSACIG00000003248	urb1	97	44.824	Amphilophus_citrinellus
ENSLAFG00000010407	URB1	99	41.388	ENSAOCG00000010364	urb1	99	41.388	Amphiprion_ocellaris
ENSLAFG00000010407	URB1	96	52.727	ENSAPEG00000010758	urb1	99	52.727	Amphiprion_percula
ENSLAFG00000010407	URB1	98	45.058	ENSATEG00000011790	urb1	96	45.058	Anabas_testudineus
ENSLAFG00000010407	URB1	96	57.407	ENSAPLG00000012791	URB1	99	57.233	Anas_platyrhynchos
ENSLAFG00000010407	URB1	98	54.481	ENSACAG00000002817	URB1	98	54.282	Anolis_carolinensis
ENSLAFG00000010407	URB1	100	78.518	ENSANAG00000024617	URB1	99	78.518	Aotus_nancymaae
ENSLAFG00000010407	URB1	98	45.022	ENSACLG00000024865	urb1	99	45.022	Astatotilapia_calliptera
ENSLAFG00000010407	URB1	99	40.911	ENSAMXG00000012306	urb1	99	40.945	Astyanax_mexicanus
ENSLAFG00000010407	URB1	99	74.442	ENSBTAG00000012412	URB1	99	74.530	Bos_taurus
ENSLAFG00000010407	URB1	100	78.284	ENSCJAG00000009118	URB1	99	78.284	Callithrix_jacchus
ENSLAFG00000010407	URB1	99	78.293	ENSCAFG00000008892	URB1	99	78.293	Canis_familiaris
ENSLAFG00000010407	URB1	99	77.082	ENSCAFG00020025994	-	99	77.038	Canis_lupus_dingo
ENSLAFG00000010407	URB1	99	78.002	ENSCAFG00020025987	-	99	78.002	Canis_lupus_dingo
ENSLAFG00000010407	URB1	99	74.223	ENSCHIG00000015645	URB1	99	74.311	Capra_hircus
ENSLAFG00000010407	URB1	99	77.861	ENSTSYG00000013286	URB1	99	77.861	Carlito_syrichta
ENSLAFG00000010407	URB1	98	74.091	ENSCAPG00000015589	URB1	99	74.091	Cavia_aperea
ENSLAFG00000010407	URB1	100	75.011	ENSCPOG00000006748	URB1	99	75.011	Cavia_porcellus
ENSLAFG00000010407	URB1	100	78.640	ENSCCAG00000021299	URB1	99	78.640	Cebus_capucinus
ENSLAFG00000010407	URB1	99	78.751	ENSCATG00000042630	URB1	99	78.751	Cercocebus_atys
ENSLAFG00000010407	URB1	100	76.447	ENSCLAG00000005262	URB1	99	76.447	Chinchilla_lanigera
ENSLAFG00000010407	URB1	99	77.048	ENSCSAG00000009584	URB1	99	77.048	Chlorocebus_sabaeus
ENSLAFG00000010407	URB1	99	59.581	ENSCPBG00000006454	URB1	99	59.712	Chrysemys_picta_bellii
ENSLAFG00000010407	URB1	99	78.751	ENSCANG00000031088	URB1	99	78.751	Colobus_angolensis_palliatus
ENSLAFG00000010407	URB1	99	72.190	ENSCGRG00001010616	Urb1	100	71.753	Cricetulus_griseus_chok1gshd
ENSLAFG00000010407	URB1	98	71.839	ENSCGRG00000015840	Urb1	100	71.839	Cricetulus_griseus_crigri
ENSLAFG00000010407	URB1	99	42.420	ENSCSEG00000012616	urb1	99	42.595	Cynoglossus_semilaevis
ENSLAFG00000010407	URB1	93	51.949	ENSCVAG00000009076	urb1	98	52.737	Cyprinodon_variegatus
ENSLAFG00000010407	URB1	99	44.567	ENSDARG00000060308	urb1	99	44.537	Danio_rerio
ENSLAFG00000010407	URB1	85	80.888	ENSDNOG00000015586	URB1	99	80.888	Dasypus_novemcinctus
ENSLAFG00000010407	URB1	100	75.175	ENSDORG00000006735	Urb1	99	75.175	Dipodomys_ordii
ENSLAFG00000010407	URB1	92	82.374	ENSETEG00000009080	URB1	92	82.374	Echinops_telfairi
ENSLAFG00000010407	URB1	100	78.192	ENSEASG00005007711	URB1	99	78.148	Equus_asinus_asinus
ENSLAFG00000010407	URB1	97	86.230	ENSECAG00000013206	URB1	99	86.230	Equus_caballus
ENSLAFG00000010407	URB1	57	85.000	ENSEEUG00000003626	-	57	85.000	Erinaceus_europaeus
ENSLAFG00000010407	URB1	98	45.342	ENSELUG00000020516	urb1	98	45.571	Esox_lucius
ENSLAFG00000010407	URB1	99	77.690	ENSFCAG00000002177	URB1	99	77.734	Felis_catus
ENSLAFG00000010407	URB1	98	51.299	ENSFALG00000004636	URB1	99	51.408	Ficedula_albicollis
ENSLAFG00000010407	URB1	99	75.954	ENSFDAG00000007288	URB1	95	75.954	Fukomys_damarensis
ENSLAFG00000010407	URB1	99	41.783	ENSFHEG00000000202	urb1	99	42.306	Fundulus_heteroclitus
ENSLAFG00000010407	URB1	93	46.240	ENSGMOG00000001838	urb1	94	46.240	Gadus_morhua
ENSLAFG00000010407	URB1	99	57.374	ENSGALG00000015887	URB1	99	57.374	Gallus_gallus
ENSLAFG00000010407	URB1	94	52.487	ENSGAFG00000020694	urb1	98	52.487	Gambusia_affinis
ENSLAFG00000010407	URB1	98	45.117	ENSGACG00000011703	urb1	99	45.117	Gasterosteus_aculeatus
ENSLAFG00000010407	URB1	99	59.170	ENSGAGG00000022544	URB1	99	59.170	Gopherus_agassizii
ENSLAFG00000010407	URB1	100	78.904	ENSGGOG00000000285	URB1	99	78.904	Gorilla_gorilla
ENSLAFG00000010407	URB1	98	45.111	ENSHBUG00000001904	urb1	99	45.111	Haplochromis_burtoni
ENSLAFG00000010407	URB1	99	74.675	ENSHGLG00000004907	URB1	99	74.675	Heterocephalus_glaber_female
ENSLAFG00000010407	URB1	99	75.307	ENSHGLG00100010749	URB1	99	75.307	Heterocephalus_glaber_male
ENSLAFG00000010407	URB1	72	48.047	ENSHCOG00000018683	urb1	97	48.819	Hippocampus_comes
ENSLAFG00000010407	URB1	99	40.923	ENSIPUG00000014721	urb1	99	41.097	Ictalurus_punctatus
ENSLAFG00000010407	URB1	99	77.244	ENSSTOG00000004539	URB1	99	77.011	Ictidomys_tridecemlineatus
ENSLAFG00000010407	URB1	99	45.511	ENSKMAG00000006001	urb1	99	47.286	Kryptolebias_marmoratus
ENSLAFG00000010407	URB1	97	41.812	ENSLBEG00000027208	urb1	99	41.812	Labrus_bergylta
ENSLAFG00000010407	URB1	99	49.632	ENSLACG00000017059	URB1	99	49.675	Latimeria_chalumnae
ENSLAFG00000010407	URB1	99	46.835	ENSLOCG00000009190	urb1	99	46.835	Lepisosteus_oculatus
ENSLAFG00000010407	URB1	99	78.619	ENSMFAG00000034391	URB1	96	78.619	Macaca_fascicularis
ENSLAFG00000010407	URB1	99	78.355	ENSMMUG00000010295	URB1	99	78.355	Macaca_mulatta
ENSLAFG00000010407	URB1	99	77.211	ENSMNEG00000032981	URB1	99	77.211	Macaca_nemestrina
ENSLAFG00000010407	URB1	99	78.707	ENSMLEG00000041435	URB1	99	78.707	Mandrillus_leucophaeus
ENSLAFG00000010407	URB1	99	43.257	ENSMAMG00000011238	urb1	99	43.170	Mastacembelus_armatus
ENSLAFG00000010407	URB1	98	41.622	ENSMZEG00005011862	urb1	99	41.781	Maylandia_zebra
ENSLAFG00000010407	URB1	98	57.626	ENSMGAG00000014512	URB1	99	57.626	Meleagris_gallopavo
ENSLAFG00000010407	URB1	94	76.087	ENSMAUG00000010516	Urb1	100	76.087	Mesocricetus_auratus
ENSLAFG00000010407	URB1	100	78.421	ENSMICG00000016424	URB1	99	78.421	Microcebus_murinus
ENSLAFG00000010407	URB1	99	71.078	ENSMOCG00000012613	Urb1	99	71.078	Microtus_ochrogaster
ENSLAFG00000010407	URB1	100	64.554	ENSMODG00000021076	URB1	100	64.554	Monodelphis_domestica
ENSLAFG00000010407	URB1	93	53.055	ENSMALG00000017411	urb1	96	53.055	Monopterus_albus
ENSLAFG00000010407	URB1	100	71.554	MGP_CAROLIEiJ_G0020948	Urb1	99	71.554	Mus_caroli
ENSLAFG00000010407	URB1	100	71.685	ENSMUSG00000039929	Urb1	99	71.685	Mus_musculus
ENSLAFG00000010407	URB1	100	71.466	MGP_PahariEiJ_G0016653	Urb1	99	71.466	Mus_pahari
ENSLAFG00000010407	URB1	99	71.366	MGP_SPRETEiJ_G0021854	Urb1	99	71.366	Mus_spretus
ENSLAFG00000010407	URB1	100	76.876	ENSMPUG00000001123	URB1	99	76.876	Mustela_putorius_furo
ENSLAFG00000010407	URB1	99	72.107	ENSNGAG00000001905	Urb1	99	72.107	Nannospalax_galili
ENSLAFG00000010407	URB1	80	44.875	ENSNBRG00000001049	urb1	98	44.945	Neolamprologus_brichardi
ENSLAFG00000010407	URB1	99	77.045	ENSNLEG00000026872	URB1	99	76.930	Nomascus_leucogenys
ENSLAFG00000010407	URB1	96	60.306	ENSMEUG00000010828	URB1	96	60.179	Notamacropus_eugenii
ENSLAFG00000010407	URB1	100	70.408	ENSOPRG00000013482	URB1	100	70.408	Ochotona_princeps
ENSLAFG00000010407	URB1	99	74.318	ENSODEG00000002587	URB1	99	74.318	Octodon_degus
ENSLAFG00000010407	URB1	99	44.796	ENSONIG00000005599	urb1	99	44.796	Oreochromis_niloticus
ENSLAFG00000010407	URB1	99	76.086	ENSOCUG00000009381	URB1	99	76.098	Oryctolagus_cuniculus
ENSLAFG00000010407	URB1	99	44.004	ENSORLG00000003429	urb1	99	44.004	Oryzias_latipes
ENSLAFG00000010407	URB1	99	43.425	ENSORLG00020013785	urb1	99	43.425	Oryzias_latipes_hni
ENSLAFG00000010407	URB1	99	41.876	ENSORLG00015019421	urb1	97	46.466	Oryzias_latipes_hsok
ENSLAFG00000010407	URB1	77	51.373	ENSOMEG00000002094	urb1	97	51.373	Oryzias_melastigma
ENSLAFG00000010407	URB1	100	77.578	ENSOGAG00000017140	URB1	99	77.578	Otolemur_garnettii
ENSLAFG00000010407	URB1	97	75.507	ENSOARG00000013679	URB1	99	75.591	Ovis_aries
ENSLAFG00000010407	URB1	100	79.254	ENSPPAG00000003423	URB1	99	79.254	Pan_paniscus
ENSLAFG00000010407	URB1	99	77.910	ENSPPRG00000023131	URB1	99	77.910	Panthera_pardus
ENSLAFG00000010407	URB1	91	77.464	ENSPTIG00000016125	URB1	97	77.464	Panthera_tigris_altaica
ENSLAFG00000010407	URB1	100	79.123	ENSPTRG00000013852	URB1	99	79.123	Pan_troglodytes
ENSLAFG00000010407	URB1	99	78.707	ENSPANG00000021964	URB1	99	78.707	Papio_anubis
ENSLAFG00000010407	URB1	99	46.498	ENSPKIG00000003683	urb1	98	46.752	Paramormyrops_kingsleyae
ENSLAFG00000010407	URB1	99	72.093	ENSPEMG00000021205	Urb1	99	72.093	Peromyscus_maniculatus_bairdii
ENSLAFG00000010407	URB1	80	34.056	ENSPMAG00000009733	URB1	99	35.336	Petromyzon_marinus
ENSLAFG00000010407	URB1	100	64.292	ENSPCIG00000016350	URB1	100	64.292	Phascolarctos_cinereus
ENSLAFG00000010407	URB1	96	43.082	ENSPLAG00000004371	urb1	99	43.082	Poecilia_latipinna
ENSLAFG00000010407	URB1	99	43.474	ENSPMEG00000006634	urb1	99	43.474	Poecilia_mexicana
ENSLAFG00000010407	URB1	99	43.736	ENSPREG00000013453	urb1	99	43.736	Poecilia_reticulata
ENSLAFG00000010407	URB1	99	78.936	ENSPPYG00000011359	URB1	99	78.816	Pongo_abelii
ENSLAFG00000010407	URB1	99	73.442	ENSPCAG00000007430	URB1	99	73.442	Procavia_capensis
ENSLAFG00000010407	URB1	100	78.938	ENSPCOG00000022695	URB1	99	78.938	Propithecus_coquereli
ENSLAFG00000010407	URB1	100	76.920	ENSPVAG00000000889	URB1	99	76.920	Pteropus_vampyrus
ENSLAFG00000010407	URB1	98	43.639	ENSPNYG00000010589	urb1	99	43.594	Pundamilia_nyererei
ENSLAFG00000010407	URB1	97	41.567	ENSPNAG00000019324	urb1	99	41.572	Pygocentrus_nattereri
ENSLAFG00000010407	URB1	100	71.160	ENSRNOG00000002080	Urb1	99	71.291	Rattus_norvegicus
ENSLAFG00000010407	URB1	99	78.091	ENSRBIG00000033122	URB1	99	78.091	Rhinopithecus_bieti
ENSLAFG00000010407	URB1	99	78.135	ENSRROG00000040237	URB1	99	78.135	Rhinopithecus_roxellana
ENSLAFG00000010407	URB1	100	78.957	ENSSBOG00000027672	URB1	99	78.957	Saimiri_boliviensis_boliviensis
ENSLAFG00000010407	URB1	100	63.688	ENSSHAG00000005140	URB1	100	63.708	Sarcophilus_harrisii
ENSLAFG00000010407	URB1	92	46.940	ENSSFOG00015000339	urb1	99	46.940	Scleropages_formosus
ENSLAFG00000010407	URB1	99	44.087	ENSSMAG00000003782	urb1	99	44.517	Scophthalmus_maximus
ENSLAFG00000010407	URB1	99	44.764	ENSSDUG00000012313	urb1	99	44.764	Seriola_dumerili
ENSLAFG00000010407	URB1	99	44.921	ENSSLDG00000023179	urb1	99	44.921	Seriola_lalandi_dorsalis
ENSLAFG00000010407	URB1	99	55.895	ENSSPUG00000012447	URB1	99	55.939	Sphenodon_punctatus
ENSLAFG00000010407	URB1	99	44.653	ENSSPAG00000006325	urb1	99	44.522	Stegastes_partitus
ENSLAFG00000010407	URB1	100	75.986	ENSSSCG00000032024	URB1	99	75.986	Sus_scrofa
ENSLAFG00000010407	URB1	73	58.925	ENSTGUG00000013442	URB1	100	58.925	Taeniopygia_guttata
ENSLAFG00000010407	URB1	99	43.524	ENSTRUG00000009372	urb1	99	43.524	Takifugu_rubripes
ENSLAFG00000010407	URB1	99	43.002	ENSTNIG00000016277	urb1	99	43.002	Tetraodon_nigroviridis
ENSLAFG00000010407	URB1	81	81.159	ENSTBEG00000010044	URB1	81	81.159	Tupaia_belangeri
ENSLAFG00000010407	URB1	90	78.556	ENSTTRG00000007712	URB1	92	78.766	Tursiops_truncatus
ENSLAFG00000010407	URB1	99	77.875	ENSUAMG00000012231	URB1	99	77.875	Ursus_americanus
ENSLAFG00000010407	URB1	91	79.890	ENSUMAG00000017419	URB1	97	79.990	Ursus_maritimus
ENSLAFG00000010407	URB1	68	86.640	ENSVPAG00000001164	URB1	68	86.640	Vicugna_pacos
ENSLAFG00000010407	URB1	99	77.675	ENSVVUG00000000551	URB1	99	77.675	Vulpes_vulpes
ENSLAFG00000010407	URB1	97	51.814	ENSXETG00000009895	urb1	99	51.353	Xenopus_tropicalis
ENSLAFG00000010407	URB1	99	41.514	ENSXCOG00000005500	urb1	98	46.011	Xiphophorus_couchianus
ENSLAFG00000010407	URB1	99	41.444	ENSXMAG00000007253	urb1	98	46.035	Xiphophorus_maculatus