EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000010497 (Gene tree)
Gene ID: -
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 122369 bases
Position: chrscaffold_7:57414150-57536518
Accession: 18734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000029084	rRNA_proc-arch	PF13234.6	3.5e-87	1	1
ENSLAFP00000008787	rRNA_proc-arch	PF13234.6	3.5e-87	1	1
ENSLAFP00000029084	DEAD	PF00270.29	3.9e-17	1	1
ENSLAFP00000008787	DEAD	PF00270.29	3.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000010498	MTREX-202	3123	-	ENSLAFP00000008787	1041 (aa)	-	G3T5Q8
ENSLAFT00000031356	MTREX-201	3129	-	ENSLAFP00000029084	1043 (aa)	-	G3UMM5

Gene Model

Click here to download ENSLAFG00000010497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000010497's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000010497	MTREX	89	35.824	ENSLAFG00000014231	SKIV2L	77	35.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000010497	MTREX	100	95.969	ENSG00000039123	MTREX	99	95.969	Homo_sapiens
ENSLAFG00000010497	MTREX	100	81.316	ENSAPOG00000007814	mtrex	99	81.184	Acanthochromis_polyacanthus
ENSLAFG00000010497	MTREX	100	96.069	ENSAMEG00000013856	MTREX	99	96.069	Ailuropoda_melanoleuca
ENSLAFG00000010497	MTREX	100	80.096	ENSACIG00000015117	mtrex	99	80.096	Amphilophus_citrinellus
ENSLAFG00000010497	MTREX	100	81.220	ENSAOCG00000011884	mtrex	99	81.125	Amphiprion_ocellaris
ENSLAFG00000010497	MTREX	100	81.220	ENSAPEG00000019384	mtrex	99	81.030	Amphiprion_percula
ENSLAFG00000010497	MTREX	100	81.870	ENSATEG00000015117	mtrex	99	81.644	Anabas_testudineus
ENSLAFG00000010497	MTREX	95	90.495	ENSAPLG00000009694	MTREX	99	90.495	Anas_platyrhynchos
ENSLAFG00000010497	MTREX	100	88.484	ENSACAG00000015200	MTREX	96	88.292	Anolis_carolinensis
ENSLAFG00000010497	MTREX	100	95.969	ENSANAG00000023095	MTREX	99	96.019	Aotus_nancymaae
ENSLAFG00000010497	MTREX	100	80.648	ENSACLG00000001921	mtrex	99	80.892	Astatotilapia_calliptera
ENSLAFG00000010497	MTREX	97	80.433	ENSAMXG00000018751	mtrex	99	82.129	Astyanax_mexicanus
ENSLAFG00000010497	MTREX	100	95.681	ENSBTAG00000010518	MTREX	99	95.681	Bos_taurus
ENSLAFG00000010497	MTREX	91	51.525	WBGene00012342	mtr-4	94	51.187	Caenorhabditis_elegans
ENSLAFG00000010497	MTREX	100	95.134	ENSCJAG00000001773	MTREX	99	95.134	Callithrix_jacchus
ENSLAFG00000010497	MTREX	100	95.969	ENSCAFG00000006818	MTREX	99	95.969	Canis_familiaris
ENSLAFG00000010497	MTREX	100	95.969	ENSCAFG00020024352	MTREX	99	95.969	Canis_lupus_dingo
ENSLAFG00000010497	MTREX	100	95.777	ENSCHIG00000024413	MTREX	99	95.777	Capra_hircus
ENSLAFG00000010497	MTREX	94	93.716	ENSTSYG00000007389	MTREX	99	93.716	Carlito_syrichta
ENSLAFG00000010497	MTREX	87	87.045	ENSCAPG00000008696	MTREX	96	87.045	Cavia_aperea
ENSLAFG00000010497	MTREX	100	95.489	ENSCPOG00000009797	MTREX	99	95.489	Cavia_porcellus
ENSLAFG00000010497	MTREX	100	95.969	ENSCCAG00000014177	MTREX	99	95.969	Cebus_capucinus
ENSLAFG00000010497	MTREX	100	95.777	ENSCATG00000042153	MTREX	99	95.777	Cercocebus_atys
ENSLAFG00000010497	MTREX	100	95.393	ENSCLAG00000006622	MTREX	99	95.393	Chinchilla_lanigera
ENSLAFG00000010497	MTREX	100	91.292	ENSCSAG00000016445	MTREX	99	91.292	Chlorocebus_sabaeus
ENSLAFG00000010497	MTREX	69	98.611	ENSCHOG00000010936	-	69	98.611	Choloepus_hoffmanni
ENSLAFG00000010497	MTREX	100	89.037	ENSCPBG00000026551	MTREX	94	89.933	Chrysemys_picta_bellii
ENSLAFG00000010497	MTREX	99	64.689	ENSCING00000003239	-	99	64.672	Ciona_intestinalis
ENSLAFG00000010497	MTREX	99	63.645	ENSCSAVG00000009304	-	99	68.065	Ciona_savignyi
ENSLAFG00000010497	MTREX	100	95.681	ENSCANG00000035770	MTREX	99	95.681	Colobus_angolensis_palliatus
ENSLAFG00000010497	MTREX	100	95.010	ENSCGRG00001024680	Mtrex	99	95.010	Cricetulus_griseus_chok1gshd
ENSLAFG00000010497	MTREX	100	95.010	ENSCGRG00000000307	Mtrex	99	95.010	Cricetulus_griseus_crigri
ENSLAFG00000010497	MTREX	100	80.019	ENSCSEG00000018621	mtrex	98	80.115	Cynoglossus_semilaevis
ENSLAFG00000010497	MTREX	100	81.679	ENSCVAG00000004556	mtrex	99	81.644	Cyprinodon_variegatus
ENSLAFG00000010497	MTREX	100	83.206	ENSDARG00000013457	mtrex	99	83.111	Danio_rerio
ENSLAFG00000010497	MTREX	100	94.551	ENSDNOG00000015375	MTREX	99	94.551	Dasypus_novemcinctus
ENSLAFG00000010497	MTREX	100	95.873	ENSDORG00000006782	Mtrex	99	95.873	Dipodomys_ordii
ENSLAFG00000010497	MTREX	99	61.680	FBgn0001986	Mtr4	92	64.053	Drosophila_melanogaster
ENSLAFG00000010497	MTREX	90	78.237	ENSETEG00000000727	MTREX	90	78.237	Echinops_telfairi
ENSLAFG00000010497	MTREX	99	72.447	ENSEBUG00000012869	mtrex	99	72.447	Eptatretus_burgeri
ENSLAFG00000010497	MTREX	100	95.489	ENSEASG00005013270	MTREX	99	95.489	Equus_asinus_asinus
ENSLAFG00000010497	MTREX	100	95.585	ENSECAG00000023723	MTREX	99	97.222	Equus_caballus
ENSLAFG00000010497	MTREX	98	86.537	ENSEEUG00000000527	MTREX	100	86.537	Erinaceus_europaeus
ENSLAFG00000010497	MTREX	98	83.495	ENSELUG00000004898	mtrex	99	87.290	Esox_lucius
ENSLAFG00000010497	MTREX	100	95.777	ENSFCAG00000010575	MTREX	99	95.777	Felis_catus
ENSLAFG00000010497	MTREX	100	87.800	ENSFALG00000010850	MTREX	99	87.704	Ficedula_albicollis
ENSLAFG00000010497	MTREX	100	94.818	ENSFDAG00000011199	MTREX	99	94.818	Fukomys_damarensis
ENSLAFG00000010497	MTREX	100	81.584	ENSFHEG00000023014	mtrex	99	80.784	Fundulus_heteroclitus
ENSLAFG00000010497	MTREX	100	77.937	ENSGMOG00000014702	mtrex	99	78.128	Gadus_morhua
ENSLAFG00000010497	MTREX	100	88.868	ENSGALG00000014709	MTREX	86	88.868	Gallus_gallus
ENSLAFG00000010497	MTREX	100	81.679	ENSGAFG00000012425	mtrex	98	85.124	Gambusia_affinis
ENSLAFG00000010497	MTREX	100	76.952	ENSGACG00000016260	mtrex	96	82.826	Gasterosteus_aculeatus
ENSLAFG00000010497	MTREX	100	88.667	ENSGAGG00000020036	MTREX	99	89.166	Gopherus_agassizii
ENSLAFG00000010497	MTREX	100	96.065	ENSGGOG00000001867	MTREX	99	96.065	Gorilla_gorilla
ENSLAFG00000010497	MTREX	100	80.648	ENSHBUG00000006229	mtrex	99	80.802	Haplochromis_burtoni
ENSLAFG00000010497	MTREX	100	95.298	ENSHGLG00000019445	SKIV2L2	99	95.298	Heterocephalus_glaber_female
ENSLAFG00000010497	MTREX	100	95.298	ENSHGLG00100011833	SKIV2L2	99	95.298	Heterocephalus_glaber_male
ENSLAFG00000010497	MTREX	91	82.587	ENSHCOG00000019995	mtrex	99	82.587	Hippocampus_comes
ENSLAFG00000010497	MTREX	100	83.381	ENSIPUG00000024348	skiv2l2	99	83.015	Ictalurus_punctatus
ENSLAFG00000010497	MTREX	100	96.065	ENSSTOG00000010802	MTREX	99	96.065	Ictidomys_tridecemlineatus
ENSLAFG00000010497	MTREX	100	89.049	ENSJJAG00000020975	Mtrex	99	88.857	Jaculus_jaculus
ENSLAFG00000010497	MTREX	100	81.011	ENSKMAG00000012642	mtrex	99	80.916	Kryptolebias_marmoratus
ENSLAFG00000010497	MTREX	100	81.220	ENSLBEG00000019367	mtrex	99	83.697	Labrus_bergylta
ENSLAFG00000010497	MTREX	100	86.481	ENSLACG00000009075	MTREX	99	86.194	Latimeria_chalumnae
ENSLAFG00000010497	MTREX	100	85.057	ENSLOCG00000010186	mtrex	99	84.770	Lepisosteus_oculatus
ENSLAFG00000010497	MTREX	100	95.777	ENSMFAG00000031610	MTREX	99	95.777	Macaca_fascicularis
ENSLAFG00000010497	MTREX	100	94.444	ENSMMUG00000010379	MTREX	98	96.004	Macaca_mulatta
ENSLAFG00000010497	MTREX	100	95.777	ENSMNEG00000032746	MTREX	99	95.777	Macaca_nemestrina
ENSLAFG00000010497	MTREX	100	95.777	ENSMLEG00000041051	MTREX	99	95.777	Mandrillus_leucophaeus
ENSLAFG00000010497	MTREX	94	84.670	ENSMAMG00000016753	mtrex	96	86.117	Mastacembelus_armatus
ENSLAFG00000010497	MTREX	100	80.648	ENSMZEG00005000414	mtrex	99	80.802	Maylandia_zebra
ENSLAFG00000010497	MTREX	94	66.396	ENSMGAG00000003980	MTREX	99	66.396	Meleagris_gallopavo
ENSLAFG00000010497	MTREX	100	94.818	ENSMAUG00000010727	Mtrex	99	94.818	Mesocricetus_auratus
ENSLAFG00000010497	MTREX	100	96.449	ENSMICG00000012779	MTREX	99	96.449	Microcebus_murinus
ENSLAFG00000010497	MTREX	100	95.010	ENSMOCG00000019886	Mtrex	99	95.010	Microtus_ochrogaster
ENSLAFG00000010497	MTREX	100	79.656	ENSMMOG00000002476	mtrex	99	79.656	Mola_mola
ENSLAFG00000010497	MTREX	100	90.691	ENSMODG00000019494	MTREX	99	90.691	Monodelphis_domestica
ENSLAFG00000010497	MTREX	92	80.246	ENSMALG00000002917	mtrex	99	80.246	Monopterus_albus
ENSLAFG00000010497	MTREX	100	94.338	MGP_CAROLIEiJ_G0018896	Mtrex	99	94.242	Mus_caroli
ENSLAFG00000010497	MTREX	100	94.530	ENSMUSG00000016018	Mtrex	99	94.434	Mus_musculus
ENSLAFG00000010497	MTREX	100	94.434	MGP_PahariEiJ_G0015967	Mtrex	99	94.338	Mus_pahari
ENSLAFG00000010497	MTREX	100	94.530	MGP_SPRETEiJ_G0019775	Mtrex	99	94.434	Mus_spretus
ENSLAFG00000010497	MTREX	100	96.353	ENSMPUG00000007619	MTREX	99	96.353	Mustela_putorius_furo
ENSLAFG00000010497	MTREX	100	93.876	ENSMLUG00000001152	MTREX	99	93.780	Myotis_lucifugus
ENSLAFG00000010497	MTREX	100	95.489	ENSNGAG00000011938	Mtrex	99	95.489	Nannospalax_galili
ENSLAFG00000010497	MTREX	100	80.744	ENSNBRG00000011293	mtrex	99	80.898	Neolamprologus_brichardi
ENSLAFG00000010497	MTREX	100	92.146	ENSNLEG00000001494	MTREX	99	92.146	Nomascus_leucogenys
ENSLAFG00000010497	MTREX	83	92.157	ENSMEUG00000006496	-	83	92.157	Notamacropus_eugenii
ENSLAFG00000010497	MTREX	100	80.230	ENSOPRG00000008009	MTREX	99	80.230	Ochotona_princeps
ENSLAFG00000010497	MTREX	100	94.818	ENSODEG00000017234	MTREX	99	94.818	Octodon_degus
ENSLAFG00000010497	MTREX	100	80.553	ENSONIG00000007587	mtrex	99	80.707	Oreochromis_niloticus
ENSLAFG00000010497	MTREX	100	95.681	ENSOCUG00000004463	MTREX	99	95.681	Oryctolagus_cuniculus
ENSLAFG00000010497	MTREX	100	80.534	ENSORLG00000005443	mtrex	99	80.402	Oryzias_latipes
ENSLAFG00000010497	MTREX	100	80.439	ENSORLG00020006329	mtrex	99	80.306	Oryzias_latipes_hni
ENSLAFG00000010497	MTREX	100	80.323	ENSORLG00015012924	mtrex	99	80.306	Oryzias_latipes_hsok
ENSLAFG00000010497	MTREX	100	80.019	ENSOMEG00000008825	mtrex	99	79.886	Oryzias_melastigma
ENSLAFG00000010497	MTREX	100	96.065	ENSOGAG00000002886	MTREX	99	96.065	Otolemur_garnettii
ENSLAFG00000010497	MTREX	100	95.502	ENSOARG00000007764	MTREX	99	95.502	Ovis_aries
ENSLAFG00000010497	MTREX	100	96.161	ENSPPAG00000039291	MTREX	99	96.161	Pan_paniscus
ENSLAFG00000010497	MTREX	100	95.777	ENSPPRG00000019701	MTREX	99	95.777	Panthera_pardus
ENSLAFG00000010497	MTREX	100	94.242	ENSPTIG00000009313	MTREX	99	94.242	Panthera_tigris_altaica
ENSLAFG00000010497	MTREX	100	96.161	ENSPTRG00000016878	MTREX	99	96.161	Pan_troglodytes
ENSLAFG00000010497	MTREX	100	95.681	ENSPANG00000009697	MTREX	99	95.681	Papio_anubis
ENSLAFG00000010497	MTREX	100	84.814	ENSPKIG00000020833	mtrex	99	84.814	Paramormyrops_kingsleyae
ENSLAFG00000010497	MTREX	100	89.112	ENSPSIG00000012150	MTREX	99	89.837	Pelodiscus_sinensis
ENSLAFG00000010497	MTREX	100	79.294	ENSPMGG00000002582	mtrex	99	79.294	Periophthalmus_magnuspinnatus
ENSLAFG00000010497	MTREX	95	63.454	ENSPMAG00000009668	mtrex	100	63.353	Petromyzon_marinus
ENSLAFG00000010497	MTREX	91	94.298	ENSPCIG00000024730	MTREX	99	94.298	Phascolarctos_cinereus
ENSLAFG00000010497	MTREX	75	84.411	ENSPFOG00000003141	mtrex	99	84.645	Poecilia_formosa
ENSLAFG00000010497	MTREX	100	81.584	ENSPLAG00000021311	mtrex	99	81.393	Poecilia_latipinna
ENSLAFG00000010497	MTREX	92	85.205	ENSPMEG00000010597	mtrex	99	85.519	Poecilia_mexicana
ENSLAFG00000010497	MTREX	100	81.298	ENSPREG00000003089	mtrex	99	81.202	Poecilia_reticulata
ENSLAFG00000010497	MTREX	98	96.390	ENSPPYG00000015469	MTREX	98	96.390	Pongo_abelii
ENSLAFG00000010497	MTREX	94	80.930	ENSPCAG00000013120	MTREX	94	80.930	Procavia_capensis
ENSLAFG00000010497	MTREX	99	90.431	ENSPCOG00000018092	MTREX	99	90.326	Propithecus_coquereli
ENSLAFG00000010497	MTREX	100	95.969	ENSPVAG00000002445	MTREX	99	95.969	Pteropus_vampyrus
ENSLAFG00000010497	MTREX	100	80.553	ENSPNYG00000006164	mtrex	99	80.707	Pundamilia_nyererei
ENSLAFG00000010497	MTREX	100	83.954	ENSPNAG00000008794	mtrex	99	83.954	Pygocentrus_nattereri
ENSLAFG00000010497	MTREX	99	94.947	ENSRNOG00000010125	Mtrex	97	94.947	Rattus_norvegicus
ENSLAFG00000010497	MTREX	100	94.050	ENSRBIG00000034930	MTREX	99	94.050	Rhinopithecus_bieti
ENSLAFG00000010497	MTREX	100	95.777	ENSRROG00000039895	MTREX	99	95.777	Rhinopithecus_roxellana
ENSLAFG00000010497	MTREX	89	53.960	YJL050W	MTR4	88	53.960	Saccharomyces_cerevisiae
ENSLAFG00000010497	MTREX	100	95.777	ENSSBOG00000026693	MTREX	99	95.777	Saimiri_boliviensis_boliviensis
ENSLAFG00000010497	MTREX	96	92.879	ENSSHAG00000004600	MTREX	99	92.879	Sarcophilus_harrisii
ENSLAFG00000010497	MTREX	100	85.373	ENSSFOG00015014355	skiv2l2	99	85.277	Scleropages_formosus
ENSLAFG00000010497	MTREX	100	80.934	ENSSMAG00000007572	mtrex	99	80.857	Scophthalmus_maximus
ENSLAFG00000010497	MTREX	100	81.471	ENSSDUG00000023789	mtrex	95	85.610	Seriola_dumerili
ENSLAFG00000010497	MTREX	100	81.220	ENSSLDG00000006301	mtrex	95	85.610	Seriola_lalandi_dorsalis
ENSLAFG00000010497	MTREX	100	92.514	ENSSARG00000008387	MTREX	99	92.514	Sorex_araneus
ENSLAFG00000010497	MTREX	100	76.313	ENSSPUG00000007071	MTREX	99	77.085	Sphenodon_punctatus
ENSLAFG00000010497	MTREX	92	85.100	ENSSPAG00000011319	mtrex	94	85.519	Stegastes_partitus
ENSLAFG00000010497	MTREX	100	96.257	ENSSSCG00000016911	MTREX	99	96.257	Sus_scrofa
ENSLAFG00000010497	MTREX	100	87.236	ENSTGUG00000002480	MTREX	99	87.236	Taeniopygia_guttata
ENSLAFG00000010497	MTREX	100	80.398	ENSTRUG00000014571	mtrex	99	80.458	Takifugu_rubripes
ENSLAFG00000010497	MTREX	100	79.846	ENSTBEG00000007769	MTREX	99	79.846	Tupaia_belangeri
ENSLAFG00000010497	MTREX	100	95.585	ENSTTRG00000008678	MTREX	99	95.585	Tursiops_truncatus
ENSLAFG00000010497	MTREX	100	96.065	ENSUAMG00000023061	MTREX	99	96.065	Ursus_americanus
ENSLAFG00000010497	MTREX	100	95.402	ENSUMAG00000009373	MTREX	99	97.011	Ursus_maritimus
ENSLAFG00000010497	MTREX	100	85.125	ENSVPAG00000011174	MTREX	99	85.125	Vicugna_pacos
ENSLAFG00000010497	MTREX	100	96.161	ENSVVUG00000021337	MTREX	99	96.161	Vulpes_vulpes
ENSLAFG00000010497	MTREX	100	86.372	ENSXETG00000032798	MTREX	99	86.002	Xenopus_tropicalis
ENSLAFG00000010497	MTREX	100	81.393	ENSXMAG00000004799	mtrex	99	81.358	Xiphophorus_maculatus