EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000010609 (Gene tree)
Gene ID: -
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 8482 bases
Position: chrscaffold_12:33785820-33794301
Accession: 6919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000008883	MBD	PF01429.19	4.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000010608	MBD4-201	1710	-	ENSLAFP00000008883	569 (aa)	-	G3T5Y4

Gene Model

Click here to download ENSLAFG00000010609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000010609's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000010609	MBD4	99	75.433	ENSG00000129071	MBD4	98	79.565	Homo_sapiens
ENSLAFG00000010609	MBD4	86	42.626	ENSAPOG00000021668	mbd4	95	42.626	Acanthochromis_polyacanthus
ENSLAFG00000010609	MBD4	99	74.826	ENSAMEG00000004562	MBD4	99	74.826	Ailuropoda_melanoleuca
ENSLAFG00000010609	MBD4	86	42.744	ENSATEG00000014594	MBD4	86	42.744	Anabas_testudineus
ENSLAFG00000010609	MBD4	99	69.550	ENSBTAG00000021645	MBD4	99	69.550	Bos_taurus
ENSLAFG00000010609	MBD4	99	72.396	ENSCJAG00000017293	MBD4	99	72.396	Callithrix_jacchus
ENSLAFG00000010609	MBD4	99	73.484	ENSCAFG00000004867	MBD4	99	73.484	Canis_familiaris
ENSLAFG00000010609	MBD4	99	73.484	ENSCAFG00020007082	MBD4	99	73.484	Canis_lupus_dingo
ENSLAFG00000010609	MBD4	99	69.527	ENSCHIG00000009760	MBD4	99	69.527	Capra_hircus
ENSLAFG00000010609	MBD4	99	73.310	ENSCCAG00000029796	MBD4	99	73.310	Cebus_capucinus
ENSLAFG00000010609	MBD4	99	74.697	ENSCATG00000035211	MBD4	99	74.697	Cercocebus_atys
ENSLAFG00000010609	MBD4	94	70.350	ENSCLAG00000008974	MBD4	95	70.350	Chinchilla_lanigera
ENSLAFG00000010609	MBD4	99	74.523	ENSCSAG00000009037	MBD4	99	74.523	Chlorocebus_sabaeus
ENSLAFG00000010609	MBD4	86	50.289	ENSCPBG00000014704	MBD4	89	50.289	Chrysemys_picta_bellii
ENSLAFG00000010609	MBD4	99	75.043	ENSCANG00000007120	MBD4	99	75.043	Colobus_angolensis_palliatus
ENSLAFG00000010609	MBD4	99	65.972	ENSCGRG00001003507	Mbd4	99	66.146	Cricetulus_griseus_chok1gshd
ENSLAFG00000010609	MBD4	99	65.972	ENSCGRG00000010974	Mbd4	99	66.146	Cricetulus_griseus_crigri
ENSLAFG00000010609	MBD4	99	71.701	ENSDNOG00000049619	MBD4	99	71.701	Dasypus_novemcinctus
ENSLAFG00000010609	MBD4	80	63.793	ENSDORG00000000902	-	100	60.808	Dipodomys_ordii
ENSLAFG00000010609	MBD4	85	37.525	ENSEBUG00000010816	mbd4	98	37.525	Eptatretus_burgeri
ENSLAFG00000010609	MBD4	99	76.562	ENSEASG00005014800	MBD4	99	76.562	Equus_asinus_asinus
ENSLAFG00000010609	MBD4	99	76.215	ENSECAG00000022106	MBD4	99	76.215	Equus_caballus
ENSLAFG00000010609	MBD4	89	63.424	ENSEEUG00000011459	MBD4	95	63.424	Erinaceus_europaeus
ENSLAFG00000010609	MBD4	99	74.479	ENSFCAG00000000083	MBD4	99	74.479	Felis_catus
ENSLAFG00000010609	MBD4	82	43.595	ENSFALG00000013663	MBD4	99	44.467	Ficedula_albicollis
ENSLAFG00000010609	MBD4	86	50.482	ENSGAGG00000018644	MBD4	89	50.482	Gopherus_agassizii
ENSLAFG00000010609	MBD4	99	74.221	ENSGGOG00000010698	MBD4	99	74.221	Gorilla_gorilla
ENSLAFG00000010609	MBD4	94	70.718	ENSHGLG00000009034	MBD4	95	70.718	Heterocephalus_glaber_female
ENSLAFG00000010609	MBD4	94	70.902	ENSHGLG00100000135	MBD4	95	70.902	Heterocephalus_glaber_male
ENSLAFG00000010609	MBD4	99	68.174	ENSSTOG00000020663	MBD4	99	68.174	Ictidomys_tridecemlineatus
ENSLAFG00000010609	MBD4	99	74.306	ENSMFAG00000002266	MBD4	99	74.306	Macaca_fascicularis
ENSLAFG00000010609	MBD4	99	74.177	ENSMMUG00000012723	MBD4	99	74.177	Macaca_mulatta
ENSLAFG00000010609	MBD4	96	73.105	ENSMNEG00000029752	MBD4	99	73.056	Macaca_nemestrina
ENSLAFG00000010609	MBD4	99	74.177	ENSMLEG00000024859	MBD4	99	74.177	Mandrillus_leucophaeus
ENSLAFG00000010609	MBD4	99	76.042	ENSMICG00000008022	MBD4	99	76.042	Microcebus_murinus
ENSLAFG00000010609	MBD4	67	47.716	ENSMOCG00000002466	-	96	47.716	Microtus_ochrogaster
ENSLAFG00000010609	MBD4	85	58.317	ENSMODG00000006399	-	99	58.317	Monodelphis_domestica
ENSLAFG00000010609	MBD4	86	43.922	ENSMALG00000021517	mbd4	87	43.922	Monopterus_albus
ENSLAFG00000010609	MBD4	99	64.879	MGP_CAROLIEiJ_G0028760	Mbd4	99	64.879	Mus_caroli
ENSLAFG00000010609	MBD4	99	64.187	ENSMUSG00000030322	Mbd4	99	64.187	Mus_musculus
ENSLAFG00000010609	MBD4	99	64.706	MGP_PahariEiJ_G0022511	-	99	64.706	Mus_pahari
ENSLAFG00000010609	MBD4	99	63.841	MGP_SPRETEiJ_G0029788	Mbd4	99	63.841	Mus_spretus
ENSLAFG00000010609	MBD4	99	72.396	ENSMPUG00000017195	MBD4	99	72.396	Mustela_putorius_furo
ENSLAFG00000010609	MBD4	93	78.479	ENSMLUG00000014766	MBD4	98	78.479	Myotis_lucifugus
ENSLAFG00000010609	MBD4	99	75.694	ENSNLEG00000005337	MBD4	99	75.694	Nomascus_leucogenys
ENSLAFG00000010609	MBD4	50	100.000	ENSMEUG00000015599	-	76	100.000	Notamacropus_eugenii
ENSLAFG00000010609	MBD4	99	62.630	ENSOPRG00000000473	MBD4	99	62.630	Ochotona_princeps
ENSLAFG00000010609	MBD4	66	46.036	ENSOANG00000004589	-	97	43.779	Ornithorhynchus_anatinus
ENSLAFG00000010609	MBD4	99	63.966	ENSOCUG00000013006	MBD4	99	63.966	Oryctolagus_cuniculus
ENSLAFG00000010609	MBD4	99	70.660	ENSOGAG00000010236	MBD4	99	70.660	Otolemur_garnettii
ENSLAFG00000010609	MBD4	99	69.877	ENSOARG00000014699	MBD4	99	69.877	Ovis_aries
ENSLAFG00000010609	MBD4	99	74.567	ENSPPAG00000036528	MBD4	99	74.567	Pan_paniscus
ENSLAFG00000010609	MBD4	99	73.611	ENSPPRG00000016480	MBD4	99	73.611	Panthera_pardus
ENSLAFG00000010609	MBD4	99	74.913	ENSPTRG00000015377	MBD4	99	74.913	Pan_troglodytes
ENSLAFG00000010609	MBD4	99	74.870	ENSPANG00000015047	MBD4	99	74.870	Papio_anubis
ENSLAFG00000010609	MBD4	86	42.998	ENSPKIG00000012306	MBD4	75	42.998	Paramormyrops_kingsleyae
ENSLAFG00000010609	MBD4	94	47.652	ENSPSIG00000007892	MBD4	96	47.652	Pelodiscus_sinensis
ENSLAFG00000010609	MBD4	89	60.194	ENSPEMG00000006226	Mbd4	97	60.721	Peromyscus_maniculatus_bairdii
ENSLAFG00000010609	MBD4	89	57.611	ENSPCIG00000002276	-	97	57.611	Phascolarctos_cinereus
ENSLAFG00000010609	MBD4	99	75.043	ENSPPYG00000013417	MBD4	99	75.043	Pongo_abelii
ENSLAFG00000010609	MBD4	96	76.449	ENSPCAG00000012915	MBD4	99	76.449	Procavia_capensis
ENSLAFG00000010609	MBD4	99	77.257	ENSPVAG00000005238	MBD4	99	77.257	Pteropus_vampyrus
ENSLAFG00000010609	MBD4	99	64.421	ENSRNOG00000010919	Mbd4	99	64.421	Rattus_norvegicus
ENSLAFG00000010609	MBD4	99	74.870	ENSRBIG00000027722	MBD4	99	74.870	Rhinopithecus_bieti
ENSLAFG00000010609	MBD4	99	74.697	ENSRROG00000029136	MBD4	99	74.697	Rhinopithecus_roxellana
ENSLAFG00000010609	MBD4	99	72.222	ENSSBOG00000016810	MBD4	99	72.222	Saimiri_boliviensis_boliviensis
ENSLAFG00000010609	MBD4	94	54.348	ENSSHAG00000012953	MBD4	95	54.348	Sarcophilus_harrisii
ENSLAFG00000010609	MBD4	80	59.013	ENSSARG00000004496	-	80	59.013	Sorex_araneus
ENSLAFG00000010609	MBD4	86	50.391	ENSSPUG00000017344	MBD4	91	50.391	Sphenodon_punctatus
ENSLAFG00000010609	MBD4	99	74.003	ENSSSCG00000033303	MBD4	99	74.003	Sus_scrofa
ENSLAFG00000010609	MBD4	85	40.974	ENSTNIG00000017927	mbd4	100	40.974	Tetraodon_nigroviridis
ENSLAFG00000010609	MBD4	85	60.185	ENSTBEG00000003041	-	84	60.185	Tupaia_belangeri
ENSLAFG00000010609	MBD4	96	74.865	ENSTTRG00000011265	MBD4	99	74.865	Tursiops_truncatus
ENSLAFG00000010609	MBD4	86	76.400	ENSUAMG00000000814	MBD4	99	76.400	Ursus_americanus
ENSLAFG00000010609	MBD4	99	74.479	ENSUMAG00000017542	MBD4	99	74.479	Ursus_maritimus
ENSLAFG00000010609	MBD4	64	67.742	ENSVPAG00000004040	-	67	67.742	Vicugna_pacos
ENSLAFG00000010609	MBD4	99	73.657	ENSVVUG00000014222	MBD4	99	73.657	Vulpes_vulpes