EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000010710 (Gene tree)
Gene ID: -
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 37210 bases
Position: chrscaffold_13:24241329-24278538
Accession: 19304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000024131	RRM_1	PF00076.22	2.4e-09	1	1
ENSLAFP00000008965	RRM_1	PF00076.22	2.7e-09	1	1
ENSLAFP00000020311	RRM_1	PF00076.22	2.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000010712	SCAF4-202	3393	-	ENSLAFP00000008965	1131 (aa)	-	G3T646
ENSLAFT00000033883	SCAF4-203	3594	-	ENSLAFP00000020311	1197 (aa)	-	G3TXK3
ENSLAFT00000027629	SCAF4-201	3282	-	ENSLAFP00000024131	1093 (aa)	-	G3U8H3

Gene Model

Click here to download ENSLAFG00000010710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000010710's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000010710	SCAF4	100	92.032	ENSG00000156304	SCAF4	99	92.935	Homo_sapiens
ENSLAFG00000010710	SCAF4	81	54.686	ENSAPOG00000002946	scaf4a	56	61.468	Acanthochromis_polyacanthus
ENSLAFG00000010710	SCAF4	51	64.455	ENSAPOG00000019615	scaf4b	60	60.714	Acanthochromis_polyacanthus
ENSLAFG00000010710	SCAF4	74	93.895	ENSAMEG00000014987	SCAF4	99	92.593	Ailuropoda_melanoleuca
ENSLAFG00000010710	SCAF4	81	54.185	ENSAOCG00000000615	scaf4a	56	62.346	Amphiprion_ocellaris
ENSLAFG00000010710	SCAF4	99	77.347	ENSAPLG00000002509	SCAF4	59	90.438	Anas_platyrhynchos
ENSLAFG00000010710	SCAF4	100	66.257	ENSACAG00000002569	SCAF4	52	82.081	Anolis_carolinensis
ENSLAFG00000010710	SCAF4	100	91.339	ENSANAG00000037494	SCAF4	99	91.723	Aotus_nancymaae
ENSLAFG00000010710	SCAF4	51	61.803	ENSACLG00000024833	scaf4b	55	74.214	Astatotilapia_calliptera
ENSLAFG00000010710	SCAF4	93	51.695	ENSAMXG00000008585	scaf4a	50	75.439	Astyanax_mexicanus
ENSLAFG00000010710	SCAF4	100	92.004	ENSBTAG00000018855	SCAF4	100	91.637	Bos_taurus
ENSLAFG00000010710	SCAF4	100	91.354	ENSCJAG00000008993	SCAF4	99	97.163	Callithrix_jacchus
ENSLAFG00000010710	SCAF4	99	93.899	ENSCAFG00000008863	SCAF4	100	93.634	Canis_familiaris
ENSLAFG00000010710	SCAF4	99	91.822	ENSCAFG00020026019	SCAF4	100	94.595	Canis_lupus_dingo
ENSLAFG00000010710	SCAF4	100	91.923	ENSCHIG00000008385	SCAF4	99	92.588	Capra_hircus
ENSLAFG00000010710	SCAF4	92	93.431	ENSTSYG00000011344	SCAF4	99	97.917	Carlito_syrichta
ENSLAFG00000010710	SCAF4	99	89.771	ENSCPOG00000012443	SCAF4	99	91.736	Cavia_porcellus
ENSLAFG00000010710	SCAF4	100	92.025	ENSCCAG00000033727	SCAF4	99	93.300	Cebus_capucinus
ENSLAFG00000010710	SCAF4	100	91.543	ENSCATG00000030379	SCAF4	100	92.982	Cercocebus_atys
ENSLAFG00000010710	SCAF4	99	89.835	ENSCLAG00000006298	SCAF4	100	90.027	Chinchilla_lanigera
ENSLAFG00000010710	SCAF4	100	91.790	ENSCSAG00000009438	SCAF4	99	92.152	Chlorocebus_sabaeus
ENSLAFG00000010710	SCAF4	100	92.112	ENSCANG00000029847	SCAF4	99	92.381	Colobus_angolensis_palliatus
ENSLAFG00000010710	SCAF4	94	89.796	ENSCGRG00001020821	Scaf4	100	81.826	Cricetulus_griseus_chok1gshd
ENSLAFG00000010710	SCAF4	94	89.796	ENSCGRG00000014360	Scaf4	100	80.719	Cricetulus_griseus_crigri
ENSLAFG00000010710	SCAF4	72	55.774	ENSDARG00000077093	scaf4a	54	69.159	Danio_rerio
ENSLAFG00000010710	SCAF4	100	90.661	ENSDNOG00000019014	SCAF4	94	96.306	Dasypus_novemcinctus
ENSLAFG00000010710	SCAF4	91	87.755	ENSETEG00000000583	SCAF4	99	87.901	Echinops_telfairi
ENSLAFG00000010710	SCAF4	100	93.668	ENSEASG00005007756	SCAF4	99	93.316	Equus_asinus_asinus
ENSLAFG00000010710	SCAF4	100	93.585	ENSECAG00000014248	SCAF4	99	93.557	Equus_caballus
ENSLAFG00000010710	SCAF4	58	51.930	ENSELUG00000002779	SCAF8	60	68.841	Esox_lucius
ENSLAFG00000010710	SCAF4	100	93.228	ENSFCAG00000002228	SCAF4	99	94.189	Felis_catus
ENSLAFG00000010710	SCAF4	94	93.597	ENSFDAG00000017780	SCAF4	100	93.597	Fukomys_damarensis
ENSLAFG00000010710	SCAF4	56	51.754	ENSFHEG00000007634	scaf4b	62	71.698	Fundulus_heteroclitus
ENSLAFG00000010710	SCAF4	99	79.762	ENSGALG00000033965	SCAF4	59	90.837	Gallus_gallus
ENSLAFG00000010710	SCAF4	52	62.745	ENSGAFG00000019460	scaf4a	56	71.676	Gambusia_affinis
ENSLAFG00000010710	SCAF4	91	89.320	ENSGGOG00000015557	SCAF4	99	98.008	Gorilla_gorilla
ENSLAFG00000010710	SCAF4	100	90.497	ENSHGLG00000010582	SCAF4	99	93.690	Heterocephalus_glaber_female
ENSLAFG00000010710	SCAF4	99	90.694	ENSHGLG00100009441	SCAF4	100	93.690	Heterocephalus_glaber_male
ENSLAFG00000010710	SCAF4	66	59.162	ENSIPUG00000011285	scaf4	63	64.688	Ictalurus_punctatus
ENSLAFG00000010710	SCAF4	94	95.479	ENSSTOG00000004450	SCAF4	100	95.616	Ictidomys_tridecemlineatus
ENSLAFG00000010710	SCAF4	99	88.458	ENSJJAG00000019447	Scaf4	99	91.144	Jaculus_jaculus
ENSLAFG00000010710	SCAF4	96	62.455	ENSLACG00000013913	SCAF4	59	73.705	Latimeria_chalumnae
ENSLAFG00000010710	SCAF4	99	57.848	ENSLOCG00000009162	scaf4a	51	78.049	Lepisosteus_oculatus
ENSLAFG00000010710	SCAF4	100	91.478	ENSMFAG00000037668	SCAF4	99	92.016	Macaca_fascicularis
ENSLAFG00000010710	SCAF4	100	91.391	ENSMMUG00000001712	SCAF4	99	91.667	Macaca_mulatta
ENSLAFG00000010710	SCAF4	100	91.138	ENSMNEG00000032966	SCAF4	99	93.544	Macaca_nemestrina
ENSLAFG00000010710	SCAF4	99	91.608	ENSMLEG00000039674	SCAF4	100	92.049	Mandrillus_leucophaeus
ENSLAFG00000010710	SCAF4	99	78.097	ENSMGAG00000014515	SCAF4	59	91.235	Meleagris_gallopavo
ENSLAFG00000010710	SCAF4	99	87.500	ENSMAUG00000013307	Scaf4	100	91.084	Mesocricetus_auratus
ENSLAFG00000010710	SCAF4	100	92.707	ENSMICG00000005256	SCAF4	99	95.368	Microcebus_murinus
ENSLAFG00000010710	SCAF4	94	91.269	ENSMOCG00000012087	Scaf4	98	91.803	Microtus_ochrogaster
ENSLAFG00000010710	SCAF4	100	87.273	ENSMODG00000021040	SCAF4	100	86.818	Monodelphis_domestica
ENSLAFG00000010710	SCAF4	94	90.392	MGP_CAROLIEiJ_G0020944	Scaf4	95	89.217	Mus_caroli
ENSLAFG00000010710	SCAF4	94	90.476	ENSMUSG00000022983	Scaf4	95	89.290	Mus_musculus
ENSLAFG00000010710	SCAF4	100	81.224	MGP_PahariEiJ_G0016649	Scaf4	95	87.150	Mus_pahari
ENSLAFG00000010710	SCAF4	94	90.909	MGP_SPRETEiJ_G0021850	Scaf4	99	82.576	Mus_spretus
ENSLAFG00000010710	SCAF4	99	91.885	ENSMPUG00000001078	SCAF4	99	91.885	Mustela_putorius_furo
ENSLAFG00000010710	SCAF4	99	78.614	ENSMLUG00000011472	SCAF4	78	83.917	Myotis_lucifugus
ENSLAFG00000010710	SCAF4	99	89.886	ENSNGAG00000005214	Scaf4	99	91.973	Nannospalax_galili
ENSLAFG00000010710	SCAF4	100	91.769	ENSNLEG00000003569	SCAF4	99	92.799	Nomascus_leucogenys
ENSLAFG00000010710	SCAF4	84	95.031	ENSOPRG00000007016	SCAF4	76	95.031	Ochotona_princeps
ENSLAFG00000010710	SCAF4	99	88.870	ENSODEG00000002718	SCAF4	99	88.438	Octodon_degus
ENSLAFG00000010710	SCAF4	73	57.644	ENSONIG00000004687	scaf4a	52	72.353	Oreochromis_niloticus
ENSLAFG00000010710	SCAF4	100	87.119	ENSOCUG00000008336	SCAF4	99	87.407	Oryctolagus_cuniculus
ENSLAFG00000010710	SCAF4	52	65.085	ENSORLG00000004384	scaf4a	53	61.196	Oryzias_latipes
ENSLAFG00000010710	SCAF4	76	65.203	ENSORLG00020011857	scaf4a	53	58.896	Oryzias_latipes_hni
ENSLAFG00000010710	SCAF4	76	63.880	ENSORLG00015017880	scaf4a	54	60.890	Oryzias_latipes_hsok
ENSLAFG00000010710	SCAF4	94	94.830	ENSOGAG00000014653	SCAF4	99	94.830	Otolemur_garnettii
ENSLAFG00000010710	SCAF4	99	91.725	ENSOARG00000013894	SCAF4	99	91.339	Ovis_aries
ENSLAFG00000010710	SCAF4	100	92.032	ENSPPAG00000028535	SCAF4	99	92.935	Pan_paniscus
ENSLAFG00000010710	SCAF4	99	93.369	ENSPPRG00000000635	SCAF4	100	94.054	Panthera_pardus
ENSLAFG00000010710	SCAF4	99	90.724	ENSPTIG00000021578	SCAF4	100	86.503	Panthera_tigris_altaica
ENSLAFG00000010710	SCAF4	100	92.032	ENSPTRG00000013848	SCAF4	99	92.935	Pan_troglodytes
ENSLAFG00000010710	SCAF4	100	91.304	ENSPANG00000017332	SCAF4	99	92.876	Papio_anubis
ENSLAFG00000010710	SCAF4	65	63.405	ENSPKIG00000022408	scaf4a	90	66.058	Paramormyrops_kingsleyae
ENSLAFG00000010710	SCAF4	99	78.990	ENSPSIG00000014242	SCAF4	58	92.032	Pelodiscus_sinensis
ENSLAFG00000010710	SCAF4	58	94.576	ENSPCIG00000028183	SCAF4	91	85.424	Phascolarctos_cinereus
ENSLAFG00000010710	SCAF4	67	56.932	ENSPFOG00000017156	scaf4a	54	69.942	Poecilia_formosa
ENSLAFG00000010710	SCAF4	53	60.370	ENSPLAG00000001972	scaf4a	62	70.520	Poecilia_latipinna
ENSLAFG00000010710	SCAF4	100	91.776	ENSPPYG00000011355	SCAF4	100	92.537	Pongo_abelii
ENSLAFG00000010710	SCAF4	95	91.398	ENSPCAG00000009998	SCAF4	93	91.071	Procavia_capensis
ENSLAFG00000010710	SCAF4	100	91.703	ENSPCOG00000018710	SCAF4	99	93.597	Propithecus_coquereli
ENSLAFG00000010710	SCAF4	100	92.857	ENSPVAG00000005220	SCAF4	99	92.504	Pteropus_vampyrus
ENSLAFG00000010710	SCAF4	51	61.803	ENSPNYG00000010526	scaf4b	55	74.214	Pundamilia_nyererei
ENSLAFG00000010710	SCAF4	77	58.333	ENSPNAG00000016892	scaf4a	52	75.294	Pygocentrus_nattereri
ENSLAFG00000010710	SCAF4	100	78.293	ENSRNOG00000002104	Scaf4	94	83.551	Rattus_norvegicus
ENSLAFG00000010710	SCAF4	99	90.845	ENSRBIG00000040007	SCAF4	100	88.536	Rhinopithecus_bieti
ENSLAFG00000010710	SCAF4	100	93.777	ENSRROG00000029488	SCAF4	99	93.188	Rhinopithecus_roxellana
ENSLAFG00000010710	SCAF4	99	87.431	ENSSHAG00000001581	SCAF4	98	88.132	Sarcophilus_harrisii
ENSLAFG00000010710	SCAF4	87	48.524	ENSSFOG00015006338	scaf4a	54	58.692	Scleropages_formosus
ENSLAFG00000010710	SCAF4	72	54.259	ENSSMAG00000003738	scaf4b	58	71.698	Scophthalmus_maximus
ENSLAFG00000010710	SCAF4	81	53.996	ENSSMAG00000017901	scaf4a	53	54.656	Scophthalmus_maximus
ENSLAFG00000010710	SCAF4	64	54.908	ENSSDUG00000012380	scaf4b	59	70.440	Seriola_dumerili
ENSLAFG00000010710	SCAF4	100	88.686	ENSSARG00000009994	SCAF4	99	87.815	Sorex_araneus
ENSLAFG00000010710	SCAF4	100	89.844	ENSSSCG00000021023	SCAF4	99	89.670	Sus_scrofa
ENSLAFG00000010710	SCAF4	75	73.644	ENSTGUG00000013464	SCAF4	58	89.243	Taeniopygia_guttata
ENSLAFG00000010710	SCAF4	57	51.818	ENSTRUG00000009536	-	67	57.534	Takifugu_rubripes
ENSLAFG00000010710	SCAF4	99	92.308	ENSTTRG00000010963	SCAF4	100	91.914	Tursiops_truncatus
ENSLAFG00000010710	SCAF4	100	91.792	ENSUAMG00000008860	SCAF4	99	91.615	Ursus_americanus
ENSLAFG00000010710	SCAF4	99	93.676	ENSUMAG00000016962	SCAF4	100	93.784	Ursus_maritimus
ENSLAFG00000010710	SCAF4	99	94.044	ENSVVUG00000002953	SCAF4	100	94.595	Vulpes_vulpes
ENSLAFG00000010710	SCAF4	65	64.962	ENSXETG00000007351	scaf4	64	65.585	Xenopus_tropicalis