EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000010717 (Gene tree)
Gene ID: -
Gene Symbol: RBM28
Alias: FLJ10377
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 27243 bases
Position: chrscaffold_5:98053311-98080553
Accession: 21863
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000008971	RRM_1	PF00076.22	4.1e-59	1	3
ENSLAFP00000008971	RRM_1	PF00076.22	4.1e-59	2	3
ENSLAFP00000008971	RRM_1	PF00076.22	4.1e-59	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000010720	RBM28-201	2271	-	ENSLAFP00000008971	756 (aa)	-	G3T652

Gene Model

Click here to download ENSLAFG00000010717's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000010717's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000010717	RBM28	57	30.159	ENSLAFG00000000151	PABPC4	62	30.108

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000010717	RBM28	100	82.654	ENSG00000106344	RBM28	100	100.000	Homo_sapiens
ENSLAFG00000010717	RBM28	57	56.136	ENSAPOG00000015512	rbm28	100	51.866	Acanthochromis_polyacanthus
ENSLAFG00000010717	RBM28	100	85.294	ENSAMEG00000004776	RBM28	92	91.304	Ailuropoda_melanoleuca
ENSLAFG00000010717	RBM28	55	55.714	ENSACIG00000023153	rbm28	99	52.075	Amphilophus_citrinellus
ENSLAFG00000010717	RBM28	57	55.909	ENSAOCG00000000462	rbm28	100	51.282	Amphiprion_ocellaris
ENSLAFG00000010717	RBM28	57	55.682	ENSAPEG00000012996	rbm28	100	51.484	Amphiprion_percula
ENSLAFG00000010717	RBM28	100	83.069	ENSANAG00000033922	RBM28	100	83.069	Aotus_nancymaae
ENSLAFG00000010717	RBM28	100	49.936	ENSACLG00000025024	rbm28	100	51.269	Astatotilapia_calliptera
ENSLAFG00000010717	RBM28	58	58.145	ENSAMXG00000000763	rbm28	99	59.729	Astyanax_mexicanus
ENSLAFG00000010717	RBM28	100	82.431	ENSBTAG00000017001	RBM28	100	100.000	Bos_taurus
ENSLAFG00000010717	RBM28	100	81.890	ENSCJAG00000017731	RBM28	100	81.890	Callithrix_jacchus
ENSLAFG00000010717	RBM28	100	83.509	ENSCAFG00000001667	RBM28	100	83.598	Canis_familiaris
ENSLAFG00000010717	RBM28	100	83.509	ENSCAFG00020021648	RBM28	100	83.598	Canis_lupus_dingo
ENSLAFG00000010717	RBM28	100	81.818	ENSCHIG00000014146	RBM28	100	82.299	Capra_hircus
ENSLAFG00000010717	RBM28	100	80.105	ENSTSYG00000002892	RBM28	100	95.000	Carlito_syrichta
ENSLAFG00000010717	RBM28	84	59.177	ENSCAPG00000013218	RBM28	100	59.810	Cavia_aperea
ENSLAFG00000010717	RBM28	100	80.475	ENSCPOG00000006253	RBM28	100	80.739	Cavia_porcellus
ENSLAFG00000010717	RBM28	100	82.740	ENSCCAG00000035105	RBM28	100	83.136	Cebus_capucinus
ENSLAFG00000010717	RBM28	100	82.021	ENSCATG00000040497	RBM28	100	97.500	Cercocebus_atys
ENSLAFG00000010717	RBM28	100	76.587	ENSCLAG00000003707	RBM28	100	77.381	Chinchilla_lanigera
ENSLAFG00000010717	RBM28	100	82.872	ENSCSAG00000010161	RBM28	100	82.872	Chlorocebus_sabaeus
ENSLAFG00000010717	RBM28	57	90.323	ENSCHOG00000001994	-	63	90.323	Choloepus_hoffmanni
ENSLAFG00000010717	RBM28	51	61.048	ENSCPBG00000018088	RBM28	94	56.489	Chrysemys_picta_bellii
ENSLAFG00000010717	RBM28	82	63.441	ENSCING00000009238	-	83	42.169	Ciona_intestinalis
ENSLAFG00000010717	RBM28	72	100.000	ENSCANG00000038397	RBM28	100	100.000	Colobus_angolensis_palliatus
ENSLAFG00000010717	RBM28	65	82.520	ENSCGRG00001021278	Rbm28	100	78.517	Cricetulus_griseus_chok1gshd
ENSLAFG00000010717	RBM28	100	80.603	ENSCGRG00000005098	Rbm28	100	80.603	Cricetulus_griseus_crigri
ENSLAFG00000010717	RBM28	100	48.143	ENSCSEG00000004212	rbm28	100	48.980	Cynoglossus_semilaevis
ENSLAFG00000010717	RBM28	58	54.911	ENSCVAG00000010493	rbm28	99	49.872	Cyprinodon_variegatus
ENSLAFG00000010717	RBM28	86	57.812	ENSDARG00000025332	rbm28	100	50.495	Danio_rerio
ENSLAFG00000010717	RBM28	100	83.245	ENSDNOG00000001124	RBM28	100	82.898	Dasypus_novemcinctus
ENSLAFG00000010717	RBM28	66	80.800	ENSDORG00000004184	Rbm28	98	81.000	Dipodomys_ordii
ENSLAFG00000010717	RBM28	65	38.600	FBgn0260456	CG4806	66	38.730	Drosophila_melanogaster
ENSLAFG00000010717	RBM28	100	74.376	ENSETEG00000007130	RBM28	99	74.641	Echinops_telfairi
ENSLAFG00000010717	RBM28	86	47.120	ENSEBUG00000004419	rbm28	98	40.451	Eptatretus_burgeri
ENSLAFG00000010717	RBM28	100	83.051	ENSEASG00005008528	RBM28	100	83.442	Equus_asinus_asinus
ENSLAFG00000010717	RBM28	100	82.682	ENSECAG00000007745	RBM28	100	83.073	Equus_caballus
ENSLAFG00000010717	RBM28	100	73.919	ENSEEUG00000002389	RBM28	100	74.316	Erinaceus_europaeus
ENSLAFG00000010717	RBM28	100	51.256	ENSELUG00000020602	rbm28	100	51.625	Esox_lucius
ENSLAFG00000010717	RBM28	100	83.069	ENSFCAG00000000946	RBM28	100	100.000	Felis_catus
ENSLAFG00000010717	RBM28	100	81.110	ENSFDAG00000010169	RBM28	100	81.184	Fukomys_damarensis
ENSLAFG00000010717	RBM28	84	54.545	ENSGMOG00000007091	rbm28	99	47.815	Gadus_morhua
ENSLAFG00000010717	RBM28	59	55.629	ENSGAFG00000004802	rbm28	98	56.071	Gambusia_affinis
ENSLAFG00000010717	RBM28	57	56.193	ENSGACG00000012612	rbm28	100	51.969	Gasterosteus_aculeatus
ENSLAFG00000010717	RBM28	83	67.150	ENSGAGG00000008873	RBM28	100	54.502	Gopherus_agassizii
ENSLAFG00000010717	RBM28	95	81.415	ENSGGOG00000004644	RBM28	97	81.831	Gorilla_gorilla
ENSLAFG00000010717	RBM28	91	51.143	ENSHBUG00000009611	rbm28	94	52.468	Haplochromis_burtoni
ENSLAFG00000010717	RBM28	100	80.688	ENSHGLG00000005409	RBM28	100	80.952	Heterocephalus_glaber_female
ENSLAFG00000010717	RBM28	100	80.688	ENSHGLG00100016458	RBM28	100	80.952	Heterocephalus_glaber_male
ENSLAFG00000010717	RBM28	82	48.438	ENSHCOG00000010597	rbm28	99	42.085	Hippocampus_comes
ENSLAFG00000010717	RBM28	56	49.169	ENSIPUG00000007103	rbm28	92	46.473	Ictalurus_punctatus
ENSLAFG00000010717	RBM28	100	80.103	ENSSTOG00000002169	RBM28	100	80.616	Ictidomys_tridecemlineatus
ENSLAFG00000010717	RBM28	100	73.316	ENSJJAG00000022400	Rbm28	100	74.705	Jaculus_jaculus
ENSLAFG00000010717	RBM28	58	54.566	ENSKMAG00000013348	rbm28	99	49.872	Kryptolebias_marmoratus
ENSLAFG00000010717	RBM28	57	55.204	ENSLBEG00000012998	rbm28	100	49.563	Labrus_bergylta
ENSLAFG00000010717	RBM28	86	61.340	ENSLOCG00000015541	rbm28	80	61.856	Lepisosteus_oculatus
ENSLAFG00000010717	RBM28	100	82.546	ENSMFAG00000031036	RBM28	100	97.500	Macaca_fascicularis
ENSLAFG00000010717	RBM28	100	82.438	ENSMMUG00000007250	RBM28	100	97.500	Macaca_mulatta
ENSLAFG00000010717	RBM28	100	82.143	ENSMNEG00000036970	RBM28	100	97.500	Macaca_nemestrina
ENSLAFG00000010717	RBM28	84	81.064	ENSMLEG00000037717	RBM28	100	81.277	Mandrillus_leucophaeus
ENSLAFG00000010717	RBM28	100	50.190	ENSMAMG00000008525	rbm28	100	50.706	Mastacembelus_armatus
ENSLAFG00000010717	RBM28	93	48.898	ENSMZEG00005019625	rbm28	100	50.340	Maylandia_zebra
ENSLAFG00000010717	RBM28	65	80.081	ENSMAUG00000002263	Rbm28	100	76.598	Mesocricetus_auratus
ENSLAFG00000010717	RBM28	93	79.086	ENSMICG00000000107	RBM28	100	79.917	Microcebus_murinus
ENSLAFG00000010717	RBM28	100	79.156	ENSMOCG00000014615	Rbm28	100	79.156	Microtus_ochrogaster
ENSLAFG00000010717	RBM28	58	53.793	ENSMMOG00000008600	rbm28	100	50.102	Mola_mola
ENSLAFG00000010717	RBM28	100	72.215	ENSMODG00000015151	RBM28	100	73.394	Monodelphis_domestica
ENSLAFG00000010717	RBM28	100	78.996	MGP_CAROLIEiJ_G0028162	Rbm28	100	79.392	Mus_caroli
ENSLAFG00000010717	RBM28	100	78.524	ENSMUSG00000029701	Rbm28	100	79.260	Mus_musculus
ENSLAFG00000010717	RBM28	100	79.657	MGP_PahariEiJ_G0021920	Rbm28	100	79.657	Mus_pahari
ENSLAFG00000010717	RBM28	100	78.920	MGP_SPRETEiJ_G0029162	Rbm28	100	79.657	Mus_spretus
ENSLAFG00000010717	RBM28	100	83.113	ENSMPUG00000006511	RBM28	100	82.586	Mustela_putorius_furo
ENSLAFG00000010717	RBM28	100	82.677	ENSMLUG00000002186	RBM28	100	82.677	Myotis_lucifugus
ENSLAFG00000010717	RBM28	100	74.737	ENSNGAG00000017946	-	100	74.637	Nannospalax_galili
ENSLAFG00000010717	RBM28	100	77.513	ENSNGAG00000006480	-	100	77.116	Nannospalax_galili
ENSLAFG00000010717	RBM28	82	100.000	ENSNLEG00000012307	RBM28	100	100.000	Nomascus_leucogenys
ENSLAFG00000010717	RBM28	81	85.185	ENSMEUG00000009611	RBM28	90	85.185	Notamacropus_eugenii
ENSLAFG00000010717	RBM28	90	73.321	ENSOPRG00000015140	RBM28	90	72.222	Ochotona_princeps
ENSLAFG00000010717	RBM28	76	86.181	ENSODEG00000013217	-	84	86.181	Octodon_degus
ENSLAFG00000010717	RBM28	100	76.323	ENSODEG00000003213	-	100	76.455	Octodon_degus
ENSLAFG00000010717	RBM28	58	53.422	ENSONIG00000014924	rbm28	100	50.960	Oreochromis_niloticus
ENSLAFG00000010717	RBM28	100	64.378	ENSOANG00000000815	-	100	65.116	Ornithorhynchus_anatinus
ENSLAFG00000010717	RBM28	100	79.661	ENSOCUG00000003009	RBM28	100	79.661	Oryctolagus_cuniculus
ENSLAFG00000010717	RBM28	58	55.850	ENSORLG00000009636	rbm28	99	50.064	Oryzias_latipes
ENSLAFG00000010717	RBM28	58	54.788	ENSORLG00020002123	rbm28	99	50.916	Oryzias_latipes_hni
ENSLAFG00000010717	RBM28	86	59.259	ENSORLG00015015030	rbm28	98	57.277	Oryzias_latipes_hsok
ENSLAFG00000010717	RBM28	58	57.301	ENSOMEG00000007801	rbm28	100	51.026	Oryzias_melastigma
ENSLAFG00000010717	RBM28	90	92.500	ENSOGAG00000006011	RBM28	100	92.500	Otolemur_garnettii
ENSLAFG00000010717	RBM28	100	82.213	ENSOARG00000002547	RBM28	100	81.818	Ovis_aries
ENSLAFG00000010717	RBM28	100	82.307	ENSPPAG00000041730	RBM28	100	100.000	Pan_paniscus
ENSLAFG00000010717	RBM28	100	82.695	ENSPPRG00000004420	RBM28	100	100.000	Panthera_pardus
ENSLAFG00000010717	RBM28	100	83.069	ENSPTIG00000008550	RBM28	100	100.000	Panthera_tigris_altaica
ENSLAFG00000010717	RBM28	100	82.438	ENSPTRG00000019659	RBM28	100	100.000	Pan_troglodytes
ENSLAFG00000010717	RBM28	100	82.307	ENSPANG00000022295	RBM28	100	97.500	Papio_anubis
ENSLAFG00000010717	RBM28	99	50.680	ENSPKIG00000023453	rbm28	99	50.308	Paramormyrops_kingsleyae
ENSLAFG00000010717	RBM28	83	58.252	ENSPMGG00000012840	rbm28	100	48.545	Periophthalmus_magnuspinnatus
ENSLAFG00000010717	RBM28	100	77.675	ENSPEMG00000020673	Rbm28	100	77.675	Peromyscus_maniculatus_bairdii
ENSLAFG00000010717	RBM28	100	70.773	ENSPCIG00000012810	RBM28	100	71.953	Phascolarctos_cinereus
ENSLAFG00000010717	RBM28	58	55.481	ENSPFOG00000018209	rbm28	100	50.192	Poecilia_formosa
ENSLAFG00000010717	RBM28	57	54.977	ENSPLAG00000016078	rbm28	96	50.129	Poecilia_latipinna
ENSLAFG00000010717	RBM28	58	55.705	ENSPMEG00000004292	rbm28	100	50.320	Poecilia_mexicana
ENSLAFG00000010717	RBM28	56	54.965	ENSPREG00000014287	rbm28	98	49.674	Poecilia_reticulata
ENSLAFG00000010717	RBM28	100	83.267	ENSPPYG00000017975	RBM28	100	83.267	Pongo_abelii
ENSLAFG00000010717	RBM28	74	81.127	ENSPCAG00000008223	RBM28	84	80.328	Procavia_capensis
ENSLAFG00000010717	RBM28	90	100.000	ENSPCOG00000016797	RBM28	100	100.000	Propithecus_coquereli
ENSLAFG00000010717	RBM28	77	92.523	ENSPVAG00000005443	RBM28	76	92.523	Pteropus_vampyrus
ENSLAFG00000010717	RBM28	100	49.807	ENSPNYG00000014003	rbm28	100	50.828	Pundamilia_nyererei
ENSLAFG00000010717	RBM28	100	78.468	ENSRNOG00000005468	Rbm28	100	78.336	Rattus_norvegicus
ENSLAFG00000010717	RBM28	82	100.000	ENSRBIG00000033990	RBM28	100	100.000	Rhinopithecus_bieti
ENSLAFG00000010717	RBM28	82	100.000	ENSRROG00000040747	RBM28	100	100.000	Rhinopithecus_roxellana
ENSLAFG00000010717	RBM28	85	74.430	ENSSBOG00000012308	RBM28	100	76.440	Saimiri_boliviensis_boliviensis
ENSLAFG00000010717	RBM28	96	67.891	ENSSHAG00000017017	RBM28	99	66.756	Sarcophilus_harrisii
ENSLAFG00000010717	RBM28	58	52.489	ENSSMAG00000003885	rbm28	99	50.615	Scophthalmus_maximus
ENSLAFG00000010717	RBM28	58	55.088	ENSSDUG00000014270	rbm28	96	52.918	Seriola_dumerili
ENSLAFG00000010717	RBM28	58	54.867	ENSSLDG00000020099	rbm28	100	49.617	Seriola_lalandi_dorsalis
ENSLAFG00000010717	RBM28	76	85.678	ENSSARG00000008303	RBM28	81	85.678	Sorex_araneus
ENSLAFG00000010717	RBM28	66	75.000	ENSSPUG00000000838	RBM28	80	75.000	Sphenodon_punctatus
ENSLAFG00000010717	RBM28	57	54.036	ENSSPAG00000023305	rbm28	100	48.732	Stegastes_partitus
ENSLAFG00000010717	RBM28	100	83.466	ENSSSCG00000031847	RBM28	100	83.968	Sus_scrofa
ENSLAFG00000010717	RBM28	59	54.367	ENSTRUG00000013311	rbm28	99	49.248	Takifugu_rubripes
ENSLAFG00000010717	RBM28	99	51.145	ENSTNIG00000017962	rbm28	99	50.767	Tetraodon_nigroviridis
ENSLAFG00000010717	RBM28	86	87.278	ENSTBEG00000012749	RBM28	86	87.278	Tupaia_belangeri
ENSLAFG00000010717	RBM28	100	77.470	ENSUAMG00000006949	RBM28	100	77.734	Ursus_americanus
ENSLAFG00000010717	RBM28	100	83.466	ENSUMAG00000005997	RBM28	100	83.466	Ursus_maritimus
ENSLAFG00000010717	RBM28	88	74.030	ENSVPAG00000008304	RBM28	85	74.650	Vicugna_pacos
ENSLAFG00000010717	RBM28	100	83.245	ENSVVUG00000007270	RBM28	100	83.333	Vulpes_vulpes
ENSLAFG00000010717	RBM28	63	56.653	ENSXETG00000009271	rbm28	99	55.089	Xenopus_tropicalis
ENSLAFG00000010717	RBM28	58	54.233	ENSXCOG00000020357	rbm28	99	51.992	Xiphophorus_couchianus
ENSLAFG00000010717	RBM28	56	55.220	ENSXMAG00000004415	rbm28	98	50.000	Xiphophorus_maculatus