EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000010770 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 23751 bases
Position: chrscaffold_8:44993363-45017113
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000009009	POP1	PF06978.11	3.7e-35	1	2
ENSLAFP00000009009	POP1	PF06978.11	3.7e-35	2	2
ENSLAFP00000025679	POP1	PF06978.11	4.1e-35	1	2
ENSLAFP00000025679	POP1	PF06978.11	4.1e-35	2	2
ENSLAFP00000009009	POPLD	PF08170.12	3.4e-27	1	1
ENSLAFP00000025679	POPLD	PF08170.12	3.5e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000010770	POP1-202	3066	-	ENSLAFP00000009009	1021 (aa)	-	G3T680
ENSLAFT00000037025	POP1-201	3156	-	ENSLAFP00000025679	1051 (aa)	-	G3UCX1

Gene Model

Click here to download ENSLAFG00000010770's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000010770's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000010770	POP1	100	83.755	ENSG00000104356	POP1	100	86.631	Homo_sapiens
ENSLAFG00000010770	POP1	100	48.585	ENSAPOG00000008198	pop1	100	48.861	Acanthochromis_polyacanthus
ENSLAFG00000010770	POP1	100	80.377	ENSAMEG00000000556	POP1	100	80.377	Ailuropoda_melanoleuca
ENSLAFG00000010770	POP1	100	47.897	ENSACIG00000004169	POP1	93	50.641	Amphilophus_citrinellus
ENSLAFG00000010770	POP1	100	48.169	ENSAOCG00000010991	pop1	100	48.208	Amphiprion_ocellaris
ENSLAFG00000010770	POP1	91	48.491	ENSAPEG00000007607	pop1	96	49.011	Amphiprion_percula
ENSLAFG00000010770	POP1	100	47.037	ENSATEG00000024814	POP1	100	46.849	Anabas_testudineus
ENSLAFG00000010770	POP1	92	63.694	ENSAPLG00000014418	POP1	100	63.588	Anas_platyrhynchos
ENSLAFG00000010770	POP1	100	56.883	ENSACAG00000016083	POP1	100	56.154	Anolis_carolinensis
ENSLAFG00000010770	POP1	89	87.097	ENSANAG00000026360	POP1	99	86.510	Aotus_nancymaae
ENSLAFG00000010770	POP1	100	48.000	ENSACLG00000010951	pop1	100	48.667	Astatotilapia_calliptera
ENSLAFG00000010770	POP1	100	46.961	ENSAMXG00000014483	POP1	100	46.281	Astyanax_mexicanus
ENSLAFG00000010770	POP1	100	79.357	ENSBTAG00000012596	POP1	100	79.357	Bos_taurus
ENSLAFG00000010770	POP1	100	81.907	ENSCJAG00000015567	POP1	100	81.712	Callithrix_jacchus
ENSLAFG00000010770	POP1	100	80.411	ENSCAFG00000000469	POP1	100	80.411	Canis_familiaris
ENSLAFG00000010770	POP1	100	80.915	ENSCAFG00020026765	POP1	100	80.915	Canis_lupus_dingo
ENSLAFG00000010770	POP1	100	79.669	ENSCHIG00000017066	POP1	100	79.475	Capra_hircus
ENSLAFG00000010770	POP1	100	82.296	ENSTSYG00000003097	POP1	100	82.296	Carlito_syrichta
ENSLAFG00000010770	POP1	100	75.170	ENSCAPG00000007251	POP1	100	75.170	Cavia_aperea
ENSLAFG00000010770	POP1	100	78.082	ENSCPOG00000002901	POP1	100	78.082	Cavia_porcellus
ENSLAFG00000010770	POP1	100	82.004	ENSCCAG00000018939	POP1	100	82.004	Cebus_capucinus
ENSLAFG00000010770	POP1	100	82.879	ENSCATG00000040916	POP1	100	82.879	Cercocebus_atys
ENSLAFG00000010770	POP1	100	80.235	ENSCLAG00000007208	POP1	97	80.235	Chinchilla_lanigera
ENSLAFG00000010770	POP1	90	83.297	ENSCSAG00000012340	POP1	99	83.297	Chlorocebus_sabaeus
ENSLAFG00000010770	POP1	88	87.738	ENSCHOG00000011432	POP1	96	87.738	Choloepus_hoffmanni
ENSLAFG00000010770	POP1	100	64.689	ENSCPBG00000006373	POP1	100	65.175	Chrysemys_picta_bellii
ENSLAFG00000010770	POP1	82	38.132	ENSCING00000008323	-	89	38.132	Ciona_intestinalis
ENSLAFG00000010770	POP1	100	82.782	ENSCANG00000001647	POP1	100	82.782	Colobus_angolensis_palliatus
ENSLAFG00000010770	POP1	100	76.159	ENSCGRG00001017308	Pop1	100	76.159	Cricetulus_griseus_chok1gshd
ENSLAFG00000010770	POP1	100	70.861	ENSCGRG00000010824	Pop1	100	70.861	Cricetulus_griseus_crigri
ENSLAFG00000010770	POP1	100	47.014	ENSCSEG00000008737	POP1	100	46.730	Cynoglossus_semilaevis
ENSLAFG00000010770	POP1	100	48.243	ENSCVAG00000022248	pop1	100	47.628	Cyprinodon_variegatus
ENSLAFG00000010770	POP1	100	80.394	ENSDNOG00000019974	POP1	100	80.394	Dasypus_novemcinctus
ENSLAFG00000010770	POP1	100	70.888	ENSDORG00000015384	Pop1	100	70.888	Dipodomys_ordii
ENSLAFG00000010770	POP1	61	34.073	FBgn0026702	l(1)G0045	70	33.801	Drosophila_melanogaster
ENSLAFG00000010770	POP1	89	74.042	ENSETEG00000007839	POP1	88	74.042	Echinops_telfairi
ENSLAFG00000010770	POP1	100	82.863	ENSEASG00005003189	POP1	98	82.863	Equus_asinus_asinus
ENSLAFG00000010770	POP1	100	82.668	ENSECAG00000024236	POP1	100	82.668	Equus_caballus
ENSLAFG00000010770	POP1	67	80.000	ENSEEUG00000003050	-	70	80.000	Erinaceus_europaeus
ENSLAFG00000010770	POP1	100	48.713	ENSELUG00000003526	pop1	100	48.711	Esox_lucius
ENSLAFG00000010770	POP1	100	82.181	ENSFCAG00000002168	POP1	100	82.181	Felis_catus
ENSLAFG00000010770	POP1	100	59.556	ENSFALG00000005711	POP1	100	59.363	Ficedula_albicollis
ENSLAFG00000010770	POP1	100	80.000	ENSFDAG00000017068	POP1	100	80.000	Fukomys_damarensis
ENSLAFG00000010770	POP1	100	48.061	ENSFHEG00000019518	pop1	100	48.092	Fundulus_heteroclitus
ENSLAFG00000010770	POP1	91	46.949	ENSGMOG00000000659	POP1	97	46.217	Gadus_morhua
ENSLAFG00000010770	POP1	100	47.440	ENSGAFG00000019770	POP1	100	47.053	Gambusia_affinis
ENSLAFG00000010770	POP1	100	46.422	ENSGACG00000003499	pop1	100	46.328	Gasterosteus_aculeatus
ENSLAFG00000010770	POP1	100	63.953	ENSGAGG00000011737	POP1	98	64.147	Gopherus_agassizii
ENSLAFG00000010770	POP1	100	83.560	ENSGGOG00000003176	POP1	100	83.560	Gorilla_gorilla
ENSLAFG00000010770	POP1	100	48.381	ENSHBUG00000021583	pop1	100	48.190	Haplochromis_burtoni
ENSLAFG00000010770	POP1	100	79.086	ENSHGLG00000006029	POP1	100	79.086	Heterocephalus_glaber_female
ENSLAFG00000010770	POP1	100	79.086	ENSHGLG00100016879	POP1	100	79.086	Heterocephalus_glaber_male
ENSLAFG00000010770	POP1	90	50.964	ENSHCOG00000013888	pop1	96	50.964	Hippocampus_comes
ENSLAFG00000010770	POP1	100	45.205	ENSIPUG00000018336	pop1	91	61.176	Ictalurus_punctatus
ENSLAFG00000010770	POP1	100	81.871	ENSSTOG00000011455	POP1	97	81.871	Ictidomys_tridecemlineatus
ENSLAFG00000010770	POP1	100	75.636	ENSJJAG00000013325	Pop1	100	75.636	Jaculus_jaculus
ENSLAFG00000010770	POP1	100	47.323	ENSKMAG00000001346	POP1	100	47.519	Kryptolebias_marmoratus
ENSLAFG00000010770	POP1	89	48.807	ENSLBEG00000024457	POP1	95	48.346	Labrus_bergylta
ENSLAFG00000010770	POP1	93	57.778	ENSLACG00000012498	POP1	99	57.778	Latimeria_chalumnae
ENSLAFG00000010770	POP1	100	51.927	ENSLOCG00000009817	POP1	100	52.555	Lepisosteus_oculatus
ENSLAFG00000010770	POP1	100	82.977	ENSMFAG00000000347	POP1	100	82.977	Macaca_fascicularis
ENSLAFG00000010770	POP1	100	82.588	ENSMNEG00000036870	POP1	100	82.588	Macaca_nemestrina
ENSLAFG00000010770	POP1	100	82.782	ENSMLEG00000034986	POP1	100	82.782	Mandrillus_leucophaeus
ENSLAFG00000010770	POP1	100	47.448	ENSMAMG00000004040	pop1	100	47.159	Mastacembelus_armatus
ENSLAFG00000010770	POP1	100	48.571	ENSMZEG00005025448	pop1	100	48.381	Maylandia_zebra
ENSLAFG00000010770	POP1	100	59.449	ENSMGAG00000012167	POP1	100	59.134	Meleagris_gallopavo
ENSLAFG00000010770	POP1	100	75.402	ENSMAUG00000017537	Pop1	100	75.402	Mesocricetus_auratus
ENSLAFG00000010770	POP1	100	83.447	ENSMICG00000004361	POP1	100	83.447	Microcebus_murinus
ENSLAFG00000010770	POP1	100	75.049	ENSMOCG00000006356	Pop1	100	75.536	Microtus_ochrogaster
ENSLAFG00000010770	POP1	100	44.038	ENSMMOG00000018242	pop1	100	44.316	Mola_mola
ENSLAFG00000010770	POP1	100	69.305	ENSMODG00000006561	POP1	100	68.085	Monodelphis_domestica
ENSLAFG00000010770	POP1	100	48.764	ENSMALG00000012621	POP1	100	48.664	Monopterus_albus
ENSLAFG00000010770	POP1	100	75.195	MGP_CAROLIEiJ_G0019726	Pop1	100	75.195	Mus_caroli
ENSLAFG00000010770	POP1	100	75.389	ENSMUSG00000022325	Pop1	100	75.389	Mus_musculus
ENSLAFG00000010770	POP1	100	75.331	MGP_PahariEiJ_G0019735	Pop1	100	75.331	Mus_pahari
ENSLAFG00000010770	POP1	100	74.903	MGP_SPRETEiJ_G0020622	Pop1	100	74.903	Mus_spretus
ENSLAFG00000010770	POP1	100	80.989	ENSMPUG00000015250	POP1	100	80.989	Mustela_putorius_furo
ENSLAFG00000010770	POP1	100	76.871	ENSMLUG00000010204	POP1	100	76.968	Myotis_lucifugus
ENSLAFG00000010770	POP1	100	79.767	ENSNGAG00000001582	Pop1	100	79.767	Nannospalax_galili
ENSLAFG00000010770	POP1	89	49.569	ENSNBRG00000002356	pop1	94	49.573	Neolamprologus_brichardi
ENSLAFG00000010770	POP1	100	82.588	ENSNLEG00000002541	POP1	100	82.588	Nomascus_leucogenys
ENSLAFG00000010770	POP1	95	59.796	ENSMEUG00000003118	POP1	100	59.796	Notamacropus_eugenii
ENSLAFG00000010770	POP1	100	76.517	ENSOPRG00000007667	POP1	100	76.321	Ochotona_princeps
ENSLAFG00000010770	POP1	100	78.516	ENSODEG00000003984	POP1	100	78.516	Octodon_degus
ENSLAFG00000010770	POP1	100	48.571	ENSONIG00000016445	pop1	100	48.571	Oreochromis_niloticus
ENSLAFG00000010770	POP1	61	68.862	ENSOANG00000001278	-	94	66.467	Ornithorhynchus_anatinus
ENSLAFG00000010770	POP1	100	80.369	ENSOCUG00000017400	POP1	100	80.369	Oryctolagus_cuniculus
ENSLAFG00000010770	POP1	91	50.421	ENSORLG00000002839	pop1	95	50.632	Oryzias_latipes
ENSLAFG00000010770	POP1	90	49.784	ENSORLG00020022450	POP1	96	49.946	Oryzias_latipes_hni
ENSLAFG00000010770	POP1	91	51.263	ENSORLG00015012746	POP1	100	48.752	Oryzias_latipes_hsok
ENSLAFG00000010770	POP1	100	47.915	ENSOMEG00000006915	pop1	99	47.712	Oryzias_melastigma
ENSLAFG00000010770	POP1	100	81.226	ENSOGAG00000001466	POP1	100	81.226	Otolemur_garnettii
ENSLAFG00000010770	POP1	100	83.658	ENSPPAG00000018410	POP1	100	83.658	Pan_paniscus
ENSLAFG00000010770	POP1	100	81.907	ENSPPRG00000005002	POP1	100	81.907	Panthera_pardus
ENSLAFG00000010770	POP1	100	82.198	ENSPTIG00000016527	POP1	100	82.198	Panthera_tigris_altaica
ENSLAFG00000010770	POP1	100	83.560	ENSPTRG00000020458	POP1	100	83.560	Pan_troglodytes
ENSLAFG00000010770	POP1	100	82.685	ENSPANG00000009704	POP1	100	82.685	Papio_anubis
ENSLAFG00000010770	POP1	100	50.865	ENSPKIG00000016325	POP1	100	50.673	Paramormyrops_kingsleyae
ENSLAFG00000010770	POP1	100	63.559	ENSPSIG00000012343	POP1	100	63.559	Pelodiscus_sinensis
ENSLAFG00000010770	POP1	90	50.479	ENSPMGG00000022253	POP1	95	50.799	Periophthalmus_magnuspinnatus
ENSLAFG00000010770	POP1	99	75.355	ENSPEMG00000023633	Pop1	100	75.355	Peromyscus_maniculatus_bairdii
ENSLAFG00000010770	POP1	90	44.491	ENSPMAG00000003209	POP1	100	44.269	Petromyzon_marinus
ENSLAFG00000010770	POP1	100	67.406	ENSPCIG00000012216	POP1	100	67.406	Phascolarctos_cinereus
ENSLAFG00000010770	POP1	100	48.511	ENSPFOG00000012490	POP1	100	47.801	Poecilia_formosa
ENSLAFG00000010770	POP1	100	48.365	ENSPLAG00000004646	POP1	100	48.088	Poecilia_latipinna
ENSLAFG00000010770	POP1	100	48.424	ENSPMEG00000019592	POP1	100	48.092	Poecilia_mexicana
ENSLAFG00000010770	POP1	100	48.500	ENSPREG00000020951	POP1	100	47.881	Poecilia_reticulata
ENSLAFG00000010770	POP1	100	83.268	ENSPPYG00000018777	POP1	100	83.268	Pongo_abelii
ENSLAFG00000010770	POP1	100	83.284	ENSPCAG00000016662	POP1	100	83.284	Procavia_capensis
ENSLAFG00000010770	POP1	100	83.544	ENSPCOG00000019420	POP1	100	83.544	Propithecus_coquereli
ENSLAFG00000010770	POP1	100	81.031	ENSPVAG00000014468	POP1	100	81.031	Pteropus_vampyrus
ENSLAFG00000010770	POP1	89	49.837	ENSPNYG00000004476	pop1	97	49.375	Pundamilia_nyererei
ENSLAFG00000010770	POP1	100	46.402	ENSPNAG00000000265	pop1	100	43.923	Pygocentrus_nattereri
ENSLAFG00000010770	POP1	100	75.415	ENSRNOG00000005243	Pop1	100	75.317	Rattus_norvegicus
ENSLAFG00000010770	POP1	100	82.879	ENSRBIG00000007996	POP1	100	82.879	Rhinopithecus_bieti
ENSLAFG00000010770	POP1	100	82.879	ENSRROG00000012334	POP1	100	82.879	Rhinopithecus_roxellana
ENSLAFG00000010770	POP1	99	82.579	ENSSBOG00000020830	POP1	100	82.579	Saimiri_boliviensis_boliviensis
ENSLAFG00000010770	POP1	100	67.887	ENSSHAG00000000296	POP1	100	67.887	Sarcophilus_harrisii
ENSLAFG00000010770	POP1	100	49.234	ENSSFOG00015007429	pop1	99	48.950	Scleropages_formosus
ENSLAFG00000010770	POP1	85	53.740	ENSSMAG00000010467	POP1	98	49.119	Scophthalmus_maximus
ENSLAFG00000010770	POP1	100	47.493	ENSSDUG00000007817	POP1	100	47.092	Seriola_dumerili
ENSLAFG00000010770	POP1	100	48.152	ENSSLDG00000012565	POP1	100	48.120	Seriola_lalandi_dorsalis
ENSLAFG00000010770	POP1	100	59.436	ENSSPUG00000003550	-	100	59.728	Sphenodon_punctatus
ENSLAFG00000010770	POP1	90	51.025	ENSSPAG00000014955	pop1	94	50.970	Stegastes_partitus
ENSLAFG00000010770	POP1	100	79.765	ENSSSCG00000006078	POP1	100	79.765	Sus_scrofa
ENSLAFG00000010770	POP1	91	56.586	ENSTGUG00000012011	-	100	57.007	Taeniopygia_guttata
ENSLAFG00000010770	POP1	91	48.887	ENSTRUG00000010856	pop1	94	48.101	Takifugu_rubripes
ENSLAFG00000010770	POP1	93	49.434	ENSTNIG00000013297	pop1	99	49.538	Tetraodon_nigroviridis
ENSLAFG00000010770	POP1	95	77.869	ENSTBEG00000014214	POP1	99	77.869	Tupaia_belangeri
ENSLAFG00000010770	POP1	100	78.578	ENSTTRG00000016071	POP1	100	78.578	Tursiops_truncatus
ENSLAFG00000010770	POP1	99	77.756	ENSUAMG00000017309	POP1	100	77.756	Ursus_americanus
ENSLAFG00000010770	POP1	100	79.923	ENSUMAG00000016952	POP1	100	86.454	Ursus_maritimus
ENSLAFG00000010770	POP1	83	84.173	ENSVPAG00000008278	POP1	82	84.173	Vicugna_pacos
ENSLAFG00000010770	POP1	100	81.110	ENSVVUG00000010994	POP1	100	81.110	Vulpes_vulpes
ENSLAFG00000010770	POP1	100	43.768	ENSXCOG00000017043	POP1	100	43.462	Xiphophorus_couchianus
ENSLAFG00000010770	POP1	100	47.683	ENSXMAG00000002472	POP1	100	46.974	Xiphophorus_maculatus