EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000011013 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 3505 bases
Position: chrscaffold_127:1568392-1571896
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000009210	RNA_pol_3_Rpc31	PF11705.8	4.5e-25	1	1
ENSLAFP00000023909	RNA_pol_3_Rpc31	PF11705.8	5.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000011010	-	657	-	ENSLAFP00000009210	218 (aa)	-	G3T6N8
ENSLAFT00000034187	-	663	-	ENSLAFP00000023909	220 (aa)	-	G3U7V1

Gene Model

Click here to download ENSLAFG00000011013's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000011013's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000011013	-	98	38.397	ENSLAFG00000016260	-	95	38.053

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000011013	-	57	57.143	ENSCSEG00000020402	-	61	56.410	Cynoglossus_semilaevis
ENSLAFG00000011013	-	100	70.642	ENSETEG00000008407	-	100	70.642	Echinops_telfairi
ENSLAFG00000011013	-	52	50.442	ENSEASG00005019647	-	51	50.980	Equus_asinus_asinus
ENSLAFG00000011013	-	100	65.753	ENSECAG00000015900	-	78	90.210	Equus_caballus
ENSLAFG00000011013	-	75	94.697	ENSMAUG00000007964	-	100	96.850	Mesocricetus_auratus
ENSLAFG00000011013	-	59	92.593	ENSMMOG00000011671	-	94	48.544	Mola_mola
ENSLAFG00000011013	-	98	40.000	ENSMODG00000020218	-	95	38.889	Monodelphis_domestica
ENSLAFG00000011013	-	100	71.171	ENSMODG00000018754	-	100	71.556	Monodelphis_domestica
ENSLAFG00000011013	-	56	92.593	ENSPKIG00000013127	-	79	52.404	Paramormyrops_kingsleyae
ENSLAFG00000011013	-	98	37.850	ENSPMGG00000012296	-	95	39.512	Periophthalmus_magnuspinnatus
ENSLAFG00000011013	-	60	68.939	ENSPMAG00000001964	-	63	67.742	Petromyzon_marinus
ENSLAFG00000011013	-	94	56.944	ENSSFOG00015010803	polr3gl	95	57.277	Scleropages_formosus
ENSLAFG00000011013	-	57	54.839	ENSTRUG00000025308	-	55	54.310	Takifugu_rubripes
ENSLAFG00000011013	-	94	40.654	ENSTNIG00000009895	-	94	40.654	Tetraodon_nigroviridis
ENSLAFG00000011013	-	70	100.000	ENSTTRG00000017113	-	71	100.000	Tursiops_truncatus
ENSLAFG00000011013	-	94	61.951	ENSVPAG00000010608	-	94	63.636	Vicugna_pacos
ENSLAFG00000011013	-	98	62.673	ENSXETG00000011053	polr3gl	95	62.264	Xenopus_tropicalis