EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000011152 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 19038 bases
Position: chrscaffold_54:10970079-10989116
Accession: 100657281
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000009336	zf-U11-48K	PF05253.12	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000011155	SNRNP48-201	1020	-	ENSLAFP00000009336	339 (aa)	XP_003417916	G3T6Z5

Gene Model

Click here to download ENSLAFG00000011152's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000011152's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000011152	SNRNP48	100	89.086	ENSG00000168566	SNRNP48	100	89.086	Homo_sapiens
ENSLAFG00000011152	SNRNP48	80	46.786	ENSAPOG00000021430	snrnp48	80	47.482	Acanthochromis_polyacanthus
ENSLAFG00000011152	SNRNP48	99	84.150	ENSAMEG00000017349	SNRNP48	100	82.997	Ailuropoda_melanoleuca
ENSLAFG00000011152	SNRNP48	81	45.324	ENSACIG00000002032	snrnp48	84	44.983	Amphilophus_citrinellus
ENSLAFG00000011152	SNRNP48	77	47.794	ENSAOCG00000010562	snrnp48	80	47.482	Amphiprion_ocellaris
ENSLAFG00000011152	SNRNP48	77	48.519	ENSAPEG00000003231	snrnp48	79	48.188	Amphiprion_percula
ENSLAFG00000011152	SNRNP48	71	51.029	ENSATEG00000020210	snrnp48	81	48.043	Anabas_testudineus
ENSLAFG00000011152	SNRNP48	83	63.356	ENSACAG00000002811	SNRNP48	89	63.103	Anolis_carolinensis
ENSLAFG00000011152	SNRNP48	100	88.496	ENSANAG00000033538	SNRNP48	100	88.496	Aotus_nancymaae
ENSLAFG00000011152	SNRNP48	90	45.048	ENSAMXG00000015309	snrnp48	83	48.043	Astyanax_mexicanus
ENSLAFG00000011152	SNRNP48	100	84.412	ENSBTAG00000001123	SNRNP48	100	84.118	Bos_taurus
ENSLAFG00000011152	SNRNP48	100	88.496	ENSCJAG00000021330	SNRNP48	100	88.496	Callithrix_jacchus
ENSLAFG00000011152	SNRNP48	99	88.024	ENSCAFG00000009574	SNRNP48	82	88.024	Canis_familiaris
ENSLAFG00000011152	SNRNP48	99	88.024	ENSCAFG00020013203	SNRNP48	98	88.024	Canis_lupus_dingo
ENSLAFG00000011152	SNRNP48	100	85.588	ENSCHIG00000015216	SNRNP48	100	85.294	Capra_hircus
ENSLAFG00000011152	SNRNP48	100	87.316	ENSTSYG00000000698	SNRNP48	100	87.316	Carlito_syrichta
ENSLAFG00000011152	SNRNP48	91	80.844	ENSCAPG00000006768	SNRNP48	100	80.519	Cavia_aperea
ENSLAFG00000011152	SNRNP48	100	84.956	ENSCPOG00000007910	SNRNP48	100	84.956	Cavia_porcellus
ENSLAFG00000011152	SNRNP48	100	87.316	ENSCCAG00000035652	SNRNP48	100	87.316	Cebus_capucinus
ENSLAFG00000011152	SNRNP48	100	88.496	ENSCATG00000033947	SNRNP48	100	88.496	Cercocebus_atys
ENSLAFG00000011152	SNRNP48	100	85.841	ENSCLAG00000003765	SNRNP48	100	85.841	Chinchilla_lanigera
ENSLAFG00000011152	SNRNP48	100	89.086	ENSCSAG00000007409	SNRNP48	100	89.086	Chlorocebus_sabaeus
ENSLAFG00000011152	SNRNP48	85	63.907	ENSCPBG00000019146	SNRNP48	90	64.746	Chrysemys_picta_bellii
ENSLAFG00000011152	SNRNP48	94	30.793	ENSCING00000004121	-	87	30.822	Ciona_intestinalis
ENSLAFG00000011152	SNRNP48	100	89.086	ENSCANG00000030017	SNRNP48	100	89.086	Colobus_angolensis_palliatus
ENSLAFG00000011152	SNRNP48	99	67.761	ENSCGRG00001008805	-	95	65.672	Cricetulus_griseus_chok1gshd
ENSLAFG00000011152	SNRNP48	100	84.366	ENSCGRG00001001076	-	100	83.481	Cricetulus_griseus_chok1gshd
ENSLAFG00000011152	SNRNP48	100	84.366	ENSCGRG00000007781	Snrnp48	100	83.481	Cricetulus_griseus_crigri
ENSLAFG00000011152	SNRNP48	77	47.348	ENSCSEG00000000722	snrnp48	72	47.388	Cynoglossus_semilaevis
ENSLAFG00000011152	SNRNP48	91	45.171	ENSCVAG00000019829	snrnp48	65	49.042	Cyprinodon_variegatus
ENSLAFG00000011152	SNRNP48	81	47.331	ENSDARG00000039989	snrnp48	80	46.263	Danio_rerio
ENSLAFG00000011152	SNRNP48	100	90.000	ENSDNOG00000014978	SNRNP48	100	90.000	Dasypus_novemcinctus
ENSLAFG00000011152	SNRNP48	99	84.956	ENSDORG00000015140	Snrnp48	100	84.118	Dipodomys_ordii
ENSLAFG00000011152	SNRNP48	99	88.757	ENSEASG00005012021	SNRNP48	100	88.496	Equus_asinus_asinus
ENSLAFG00000011152	SNRNP48	100	89.381	ENSECAG00000026937	SNRNP48	100	89.381	Equus_caballus
ENSLAFG00000011152	SNRNP48	99	68.358	ENSEEUG00000015437	SNRNP48	98	66.866	Erinaceus_europaeus
ENSLAFG00000011152	SNRNP48	87	47.525	ENSELUG00000009766	snrnp48	77	48.754	Esox_lucius
ENSLAFG00000011152	SNRNP48	100	88.496	ENSFCAG00000018853	SNRNP48	100	88.496	Felis_catus
ENSLAFG00000011152	SNRNP48	83	64.384	ENSFALG00000007797	SNRNP48	92	64.360	Ficedula_albicollis
ENSLAFG00000011152	SNRNP48	99	85.503	ENSFDAG00000009231	SNRNP48	100	85.251	Fukomys_damarensis
ENSLAFG00000011152	SNRNP48	59	55.665	ENSFHEG00000014647	snrnp48	72	55.714	Fundulus_heteroclitus
ENSLAFG00000011152	SNRNP48	73	46.586	ENSGMOG00000018599	-	86	44.718	Gadus_morhua
ENSLAFG00000011152	SNRNP48	78	64.364	ENSGALG00000013005	SNRNP48	82	65.844	Gallus_gallus
ENSLAFG00000011152	SNRNP48	74	50.000	ENSGAFG00000021639	snrnp48	71	50.195	Gambusia_affinis
ENSLAFG00000011152	SNRNP48	71	50.206	ENSGACG00000017756	-	76	48.485	Gasterosteus_aculeatus
ENSLAFG00000011152	SNRNP48	84	63.000	ENSGAGG00000000865	SNRNP48	96	63.729	Gopherus_agassizii
ENSLAFG00000011152	SNRNP48	100	89.086	ENSGGOG00000013220	SNRNP48	100	89.086	Gorilla_gorilla
ENSLAFG00000011152	SNRNP48	76	46.947	ENSHBUG00000017066	snrnp48	83	45.085	Haplochromis_burtoni
ENSLAFG00000011152	SNRNP48	99	86.391	ENSHGLG00000015241	SNRNP48	100	86.136	Heterocephalus_glaber_female
ENSLAFG00000011152	SNRNP48	99	86.391	ENSHGLG00100010027	SNRNP48	100	86.136	Heterocephalus_glaber_male
ENSLAFG00000011152	SNRNP48	72	45.749	ENSHCOG00000014066	snrnp48	81	43.206	Hippocampus_comes
ENSLAFG00000011152	SNRNP48	100	89.086	ENSSTOG00000014635	SNRNP48	100	89.086	Ictidomys_tridecemlineatus
ENSLAFG00000011152	SNRNP48	100	81.711	ENSJJAG00000011495	Snrnp48	100	81.711	Jaculus_jaculus
ENSLAFG00000011152	SNRNP48	90	43.182	ENSKMAG00000016514	snrnp48	80	45.390	Kryptolebias_marmoratus
ENSLAFG00000011152	SNRNP48	76	46.565	ENSLBEG00000026249	snrnp48	77	46.125	Labrus_bergylta
ENSLAFG00000011152	SNRNP48	96	55.224	ENSLACG00000003958	SNRNP48	98	53.353	Latimeria_chalumnae
ENSLAFG00000011152	SNRNP48	83	50.865	ENSLOCG00000004187	snrnp48	95	47.774	Lepisosteus_oculatus
ENSLAFG00000011152	SNRNP48	100	89.381	ENSMFAG00000045216	SNRNP48	100	89.381	Macaca_fascicularis
ENSLAFG00000011152	SNRNP48	100	89.381	ENSMMUG00000014785	SNRNP48	100	89.381	Macaca_mulatta
ENSLAFG00000011152	SNRNP48	100	89.086	ENSMNEG00000042269	SNRNP48	100	89.086	Macaca_nemestrina
ENSLAFG00000011152	SNRNP48	100	89.381	ENSMLEG00000034004	SNRNP48	100	89.381	Mandrillus_leucophaeus
ENSLAFG00000011152	SNRNP48	76	47.510	ENSMAMG00000018673	snrnp48	71	46.953	Mastacembelus_armatus
ENSLAFG00000011152	SNRNP48	83	62.671	ENSMGAG00000006037	SNRNP48	99	62.329	Meleagris_gallopavo
ENSLAFG00000011152	SNRNP48	100	84.956	ENSMAUG00000011944	Snrnp48	100	84.071	Mesocricetus_auratus
ENSLAFG00000011152	SNRNP48	100	87.906	ENSMICG00000012497	SNRNP48	100	87.906	Microcebus_murinus
ENSLAFG00000011152	SNRNP48	100	84.661	ENSMOCG00000015555	Snrnp48	100	83.776	Microtus_ochrogaster
ENSLAFG00000011152	SNRNP48	54	51.075	ENSMMOG00000003072	-	58	51.075	Mola_mola
ENSLAFG00000011152	SNRNP48	97	69.501	ENSMODG00000009996	SNRNP48	92	68.915	Monodelphis_domestica
ENSLAFG00000011152	SNRNP48	74	50.196	ENSMALG00000005725	snrnp48	74	50.000	Monopterus_albus
ENSLAFG00000011152	SNRNP48	100	83.776	MGP_CAROLIEiJ_G0018441	Snrnp48	100	83.776	Mus_caroli
ENSLAFG00000011152	SNRNP48	100	83.481	ENSMUSG00000021431	Snrnp48	100	83.481	Mus_musculus
ENSLAFG00000011152	SNRNP48	100	83.481	MGP_PahariEiJ_G0019509	Snrnp48	100	83.481	Mus_pahari
ENSLAFG00000011152	SNRNP48	100	83.186	MGP_SPRETEiJ_G0019321	Snrnp48	100	83.186	Mus_spretus
ENSLAFG00000011152	SNRNP48	99	84.024	ENSNGAG00000004849	Snrnp48	99	84.024	Nannospalax_galili
ENSLAFG00000011152	SNRNP48	98	42.012	ENSNBRG00000012127	snrnp48	97	39.326	Neolamprologus_brichardi
ENSLAFG00000011152	SNRNP48	100	89.381	ENSNLEG00000011667	SNRNP48	100	89.381	Nomascus_leucogenys
ENSLAFG00000011152	SNRNP48	95	76.780	ENSOPRG00000015471	SNRNP48	100	76.780	Ochotona_princeps
ENSLAFG00000011152	SNRNP48	98	41.570	ENSONIG00000001520	snrnp48	97	39.607	Oreochromis_niloticus
ENSLAFG00000011152	SNRNP48	57	62.981	ENSOANG00000019888	-	100	63.942	Ornithorhynchus_anatinus
ENSLAFG00000011152	SNRNP48	84	89.510	ENSOCUG00000005168	SNRNP48	98	89.298	Oryctolagus_cuniculus
ENSLAFG00000011152	SNRNP48	87	45.724	ENSORLG00000015654	snrnp48	81	46.853	Oryzias_latipes
ENSLAFG00000011152	SNRNP48	87	45.066	ENSORLG00020015976	snrnp48	71	45.608	Oryzias_latipes_hni
ENSLAFG00000011152	SNRNP48	87	46.053	ENSORLG00015022379	snrnp48	69	47.203	Oryzias_latipes_hsok
ENSLAFG00000011152	SNRNP48	82	46.316	ENSOMEG00000022007	snrnp48	81	47.018	Oryzias_melastigma
ENSLAFG00000011152	SNRNP48	92	86.817	ENSOGAG00000005275	SNRNP48	96	87.066	Otolemur_garnettii
ENSLAFG00000011152	SNRNP48	85	85.714	ENSOARG00000017319	SNRNP48	99	85.866	Ovis_aries
ENSLAFG00000011152	SNRNP48	100	89.381	ENSPPAG00000032873	SNRNP48	100	89.381	Pan_paniscus
ENSLAFG00000011152	SNRNP48	100	88.791	ENSPPRG00000004283	SNRNP48	100	88.791	Panthera_pardus
ENSLAFG00000011152	SNRNP48	85	89.199	ENSPTIG00000013502	SNRNP48	99	89.399	Panthera_tigris_altaica
ENSLAFG00000011152	SNRNP48	100	89.381	ENSPTRG00000017703	SNRNP48	100	89.381	Pan_troglodytes
ENSLAFG00000011152	SNRNP48	100	89.381	ENSPANG00000000771	SNRNP48	100	89.381	Papio_anubis
ENSLAFG00000011152	SNRNP48	94	45.640	ENSPKIG00000013703	snrnp48	59	48.421	Paramormyrops_kingsleyae
ENSLAFG00000011152	SNRNP48	88	59.554	ENSPSIG00000002213	SNRNP48	92	61.775	Pelodiscus_sinensis
ENSLAFG00000011152	SNRNP48	72	48.193	ENSPMGG00000008120	snrnp48	86	48.193	Periophthalmus_magnuspinnatus
ENSLAFG00000011152	SNRNP48	100	84.956	ENSPEMG00000008872	Snrnp48	100	84.071	Peromyscus_maniculatus_bairdii
ENSLAFG00000011152	SNRNP48	73	51.984	ENSPFOG00000003578	snrnp48	80	48.763	Poecilia_formosa
ENSLAFG00000011152	SNRNP48	67	51.304	ENSPLAG00000002290	snrnp48	77	50.870	Poecilia_latipinna
ENSLAFG00000011152	SNRNP48	73	51.190	ENSPMEG00000018033	snrnp48	80	48.057	Poecilia_mexicana
ENSLAFG00000011152	SNRNP48	72	51.417	ENSPREG00000018541	snrnp48	71	51.587	Poecilia_reticulata
ENSLAFG00000011152	SNRNP48	100	87.906	ENSPPYG00000016209	SNRNP48	100	87.906	Pongo_abelii
ENSLAFG00000011152	SNRNP48	79	75.746	ENSPCAG00000011991	SNRNP48	100	75.746	Procavia_capensis
ENSLAFG00000011152	SNRNP48	100	87.611	ENSPVAG00000002854	SNRNP48	100	87.611	Pteropus_vampyrus
ENSLAFG00000011152	SNRNP48	76	47.328	ENSPNYG00000015399	snrnp48	92	45.424	Pundamilia_nyererei
ENSLAFG00000011152	SNRNP48	100	84.661	ENSRNOG00000013756	Snrnp48	100	84.661	Rattus_norvegicus
ENSLAFG00000011152	SNRNP48	91	89.677	ENSRBIG00000043856	SNRNP48	97	90.132	Rhinopithecus_bieti
ENSLAFG00000011152	SNRNP48	100	89.086	ENSRROG00000043229	SNRNP48	100	89.086	Rhinopithecus_roxellana
ENSLAFG00000011152	SNRNP48	100	88.791	ENSSBOG00000019486	SNRNP48	100	88.791	Saimiri_boliviensis_boliviensis
ENSLAFG00000011152	SNRNP48	98	70.640	ENSSHAG00000014483	SNRNP48	99	70.640	Sarcophilus_harrisii
ENSLAFG00000011152	SNRNP48	73	50.400	ENSSFOG00015006610	snrnp48	69	47.782	Scleropages_formosus
ENSLAFG00000011152	SNRNP48	81	48.592	ENSSDUG00000014953	snrnp48	82	47.535	Seriola_dumerili
ENSLAFG00000011152	SNRNP48	81	47.552	ENSSLDG00000005989	snrnp48	79	47.636	Seriola_lalandi_dorsalis
ENSLAFG00000011152	SNRNP48	84	65.436	ENSSPUG00000006257	SNRNP48	84	65.870	Sphenodon_punctatus
ENSLAFG00000011152	SNRNP48	78	47.636	ENSSPAG00000006454	snrnp48	80	47.331	Stegastes_partitus
ENSLAFG00000011152	SNRNP48	83	62.887	ENSTGUG00000007575	SNRNP48	92	62.847	Taeniopygia_guttata
ENSLAFG00000011152	SNRNP48	73	49.206	ENSTRUG00000007031	snrnp48	82	48.057	Takifugu_rubripes
ENSLAFG00000011152	SNRNP48	71	46.311	ENSTNIG00000012977	-	72	46.122	Tetraodon_nigroviridis
ENSLAFG00000011152	SNRNP48	78	87.594	ENSTBEG00000015620	SNRNP48	79	87.594	Tupaia_belangeri
ENSLAFG00000011152	SNRNP48	100	87.316	ENSTTRG00000016715	SNRNP48	100	87.316	Tursiops_truncatus
ENSLAFG00000011152	SNRNP48	100	87.316	ENSUAMG00000003690	SNRNP48	100	86.136	Ursus_americanus
ENSLAFG00000011152	SNRNP48	85	84.669	ENSVPAG00000003557	SNRNP48	99	84.452	Vicugna_pacos
ENSLAFG00000011152	SNRNP48	99	87.126	ENSVVUG00000004996	SNRNP48	98	87.126	Vulpes_vulpes
ENSLAFG00000011152	SNRNP48	86	52.174	ENSXETG00000020447	snrnp48	97	48.673	Xenopus_tropicalis
ENSLAFG00000011152	SNRNP48	67	50.649	ENSXCOG00000004478	snrnp48	69	50.649	Xiphophorus_couchianus
ENSLAFG00000011152	SNRNP48	82	49.643	ENSXMAG00000013595	snrnp48	76	49.643	Xiphophorus_maculatus