EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000011394 (Gene tree)
Gene ID: -
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 83486 bases
Position: chrscaffold_16:33717237-33800722
Accession: 11568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000009528	SpoU_methylase	PF00588.19	6.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000011408	TARBP1-201	4725	-	ENSLAFP00000009528	1575 (aa)	-	G3T7E8

Gene Model

Click here to download ENSLAFG00000011394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000011394's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000011394	TARBP1	100	82.464	ENSG00000059588	TARBP1	96	82.242	Homo_sapiens
ENSLAFG00000011394	TARBP1	88	45.385	ENSAPOG00000016419	si:dkey-85a20.4	85	45.385	Acanthochromis_polyacanthus
ENSLAFG00000011394	TARBP1	86	85.169	ENSAMEG00000003359	TARBP1	99	85.169	Ailuropoda_melanoleuca
ENSLAFG00000011394	TARBP1	95	43.783	ENSATEG00000020266	si:dkey-85a20.4	85	45.039	Anabas_testudineus
ENSLAFG00000011394	TARBP1	86	67.566	ENSAPLG00000007666	TARBP1	99	68.493	Anas_platyrhynchos
ENSLAFG00000011394	TARBP1	97	58.801	ENSACAG00000001142	TARBP1	86	61.283	Anolis_carolinensis
ENSLAFG00000011394	TARBP1	89	81.980	ENSANAG00000022031	TARBP1	88	82.496	Aotus_nancymaae
ENSLAFG00000011394	TARBP1	99	82.911	ENSBTAG00000004517	TARBP1	95	84.387	Bos_taurus
ENSLAFG00000011394	TARBP1	100	81.171	ENSCJAG00000018155	TARBP1	96	81.108	Callithrix_jacchus
ENSLAFG00000011394	TARBP1	91	84.969	ENSCAFG00000011533	TARBP1	98	85.653	Canis_familiaris
ENSLAFG00000011394	TARBP1	99	81.526	ENSCAFG00020027141	TARBP1	96	81.738	Canis_lupus_dingo
ENSLAFG00000011394	TARBP1	99	81.203	ENSCHIG00000011437	TARBP1	96	81.033	Capra_hircus
ENSLAFG00000011394	TARBP1	83	85.681	ENSTSYG00000010382	TARBP1	96	85.769	Carlito_syrichta
ENSLAFG00000011394	TARBP1	81	68.471	ENSCAPG00000010831	TARBP1	99	68.417	Cavia_aperea
ENSLAFG00000011394	TARBP1	100	74.351	ENSCPOG00000013995	TARBP1	96	73.971	Cavia_porcellus
ENSLAFG00000011394	TARBP1	99	81.675	ENSCCAG00000037278	TARBP1	96	81.624	Cebus_capucinus
ENSLAFG00000011394	TARBP1	99	82.416	ENSCATG00000011754	TARBP1	96	82.242	Cercocebus_atys
ENSLAFG00000011394	TARBP1	83	78.331	ENSCLAG00000003655	TARBP1	96	78.331	Chinchilla_lanigera
ENSLAFG00000011394	TARBP1	81	86.126	ENSCSAG00000010100	TARBP1	99	86.126	Chlorocebus_sabaeus
ENSLAFG00000011394	TARBP1	94	65.413	ENSCPBG00000005587	TARBP1	84	71.875	Chrysemys_picta_bellii
ENSLAFG00000011394	TARBP1	86	85.935	ENSCANG00000034343	TARBP1	99	85.935	Colobus_angolensis_palliatus
ENSLAFG00000011394	TARBP1	100	72.468	ENSCGRG00001016690	Tarbp1	96	71.392	Cricetulus_griseus_chok1gshd
ENSLAFG00000011394	TARBP1	94	73.606	ENSCGRG00000016893	Tarbp1	94	76.487	Cricetulus_griseus_crigri
ENSLAFG00000011394	TARBP1	95	40.637	ENSCSEG00000005255	si:dkey-85a20.4	86	45.775	Cynoglossus_semilaevis
ENSLAFG00000011394	TARBP1	90	44.467	ENSDARG00000079055	si:dkey-85a20.4	99	53.448	Danio_rerio
ENSLAFG00000011394	TARBP1	99	84.887	ENSDNOG00000008637	TARBP1	96	85.139	Dasypus_novemcinctus
ENSLAFG00000011394	TARBP1	82	73.349	ENSDORG00000007984	Tarbp1	100	73.349	Dipodomys_ordii
ENSLAFG00000011394	TARBP1	100	84.257	ENSEASG00005000252	TARBP1	96	84.055	Equus_asinus_asinus
ENSLAFG00000011394	TARBP1	100	84.088	ENSECAG00000023673	TARBP1	96	88.229	Equus_caballus
ENSLAFG00000011394	TARBP1	88	43.975	ENSELUG00000012193	si:dkey-85a20.4	86	43.975	Esox_lucius
ENSLAFG00000011394	TARBP1	99	80.038	ENSFCAG00000014183	TARBP1	96	80.000	Felis_catus
ENSLAFG00000011394	TARBP1	83	68.015	ENSFALG00000013565	TARBP1	99	68.012	Ficedula_albicollis
ENSLAFG00000011394	TARBP1	81	75.459	ENSFDAG00000001308	TARBP1	99	75.459	Fukomys_damarensis
ENSLAFG00000011394	TARBP1	98	51.948	ENSFHEG00000007565	si:dkey-85a20.4	77	55.307	Fundulus_heteroclitus
ENSLAFG00000011394	TARBP1	86	42.713	ENSGMOG00000004549	si:dkey-85a20.4	98	42.816	Gadus_morhua
ENSLAFG00000011394	TARBP1	96	64.995	ENSGALG00000011000	TARBP1	96	60.467	Gallus_gallus
ENSLAFG00000011394	TARBP1	95	43.421	ENSGAFG00000007387	si:dkey-85a20.4	85	44.986	Gambusia_affinis
ENSLAFG00000011394	TARBP1	88	45.583	ENSGACG00000005865	si:dkey-85a20.4	99	45.403	Gasterosteus_aculeatus
ENSLAFG00000011394	TARBP1	91	72.044	ENSGAGG00000012102	TARBP1	95	71.429	Gopherus_agassizii
ENSLAFG00000011394	TARBP1	87	83.053	ENSGGOG00000022879	TARBP1	99	83.103	Gorilla_gorilla
ENSLAFG00000011394	TARBP1	88	46.278	ENSHBUG00000008877	si:dkey-85a20.4	85	46.208	Haplochromis_burtoni
ENSLAFG00000011394	TARBP1	100	75.269	ENSHGLG00000011592	TARBP1	96	74.953	Heterocephalus_glaber_female
ENSLAFG00000011394	TARBP1	91	76.409	ENSHGLG00100015169	TARBP1	95	77.754	Heterocephalus_glaber_male
ENSLAFG00000011394	TARBP1	88	43.232	ENSIPUG00000005249	si:dkey-85a20.4	83	43.324	Ictalurus_punctatus
ENSLAFG00000011394	TARBP1	86	75.742	ENSSTOG00000032291	TARBP1	96	75.982	Ictidomys_tridecemlineatus
ENSLAFG00000011394	TARBP1	91	71.182	ENSJJAG00000017840	Tarbp1	94	73.091	Jaculus_jaculus
ENSLAFG00000011394	TARBP1	74	48.064	ENSKMAG00000017546	si:dkey-85a20.4	69	48.465	Kryptolebias_marmoratus
ENSLAFG00000011394	TARBP1	67	50.466	ENSLBEG00000012132	si:dkey-85a20.4	74	50.599	Labrus_bergylta
ENSLAFG00000011394	TARBP1	95	54.115	ENSLACG00000004337	TARBP1	93	52.846	Latimeria_chalumnae
ENSLAFG00000011394	TARBP1	98	46.641	ENSLOCG00000016214	si:dkey-85a20.4	85	49.431	Lepisosteus_oculatus
ENSLAFG00000011394	TARBP1	100	79.482	ENSMFAG00000041068	TARBP1	96	78.851	Macaca_fascicularis
ENSLAFG00000011394	TARBP1	100	79.748	ENSMMUG00000021703	TARBP1	96	79.560	Macaca_mulatta
ENSLAFG00000011394	TARBP1	100	82.242	ENSMNEG00000045002	TARBP1	96	82.053	Macaca_nemestrina
ENSLAFG00000011394	TARBP1	86	86.401	ENSMLEG00000044182	TARBP1	99	86.401	Mandrillus_leucophaeus
ENSLAFG00000011394	TARBP1	95	44.247	ENSMAMG00000021760	si:dkey-85a20.4	86	45.724	Mastacembelus_armatus
ENSLAFG00000011394	TARBP1	88	46.208	ENSMZEG00005005751	si:dkey-85a20.4	85	46.138	Maylandia_zebra
ENSLAFG00000011394	TARBP1	100	72.099	ENSMAUG00000020968	Tarbp1	96	71.211	Mesocricetus_auratus
ENSLAFG00000011394	TARBP1	94	84.343	ENSMICG00000015280	TARBP1	93	86.082	Microcebus_murinus
ENSLAFG00000011394	TARBP1	99	71.256	ENSMOCG00000004128	Tarbp1	96	70.495	Microtus_ochrogaster
ENSLAFG00000011394	TARBP1	94	42.773	ENSMMOG00000007795	si:dkey-85a20.4	85	44.153	Mola_mola
ENSLAFG00000011394	TARBP1	99	72.784	ENSMODG00000008504	TARBP1	96	72.847	Monodelphis_domestica
ENSLAFG00000011394	TARBP1	88	45.409	ENSMALG00000002916	si:dkey-85a20.4	85	45.480	Monopterus_albus
ENSLAFG00000011394	TARBP1	99	70.865	MGP_CAROLIEiJ_G0031729	Tarbp1	96	69.854	Mus_caroli
ENSLAFG00000011394	TARBP1	99	70.918	ENSMUSG00000090290	Tarbp1	96	69.791	Mus_musculus
ENSLAFG00000011394	TARBP1	99	71.419	MGP_PahariEiJ_G0023326	Tarbp1	96	70.335	Mus_pahari
ENSLAFG00000011394	TARBP1	99	70.873	MGP_SPRETEiJ_G0032846	Tarbp1	96	69.791	Mus_spretus
ENSLAFG00000011394	TARBP1	79	82.998	ENSMPUG00000002802	TARBP1	99	82.998	Mustela_putorius_furo
ENSLAFG00000011394	TARBP1	86	74.396	ENSMLUG00000002414	TARBP1	99	74.762	Myotis_lucifugus
ENSLAFG00000011394	TARBP1	100	82.242	ENSNLEG00000002518	TARBP1	96	82.242	Nomascus_leucogenys
ENSLAFG00000011394	TARBP1	66	78.495	ENSMEUG00000011370	-	63	78.495	Notamacropus_eugenii
ENSLAFG00000011394	TARBP1	74	86.190	ENSOPRG00000013822	TARBP1	71	86.190	Ochotona_princeps
ENSLAFG00000011394	TARBP1	96	73.893	ENSODEG00000005238	TARBP1	97	73.399	Octodon_degus
ENSLAFG00000011394	TARBP1	88	46.170	ENSONIG00000009789	si:dkey-85a20.4	99	46.170	Oreochromis_niloticus
ENSLAFG00000011394	TARBP1	99	81.778	ENSOCUG00000017418	TARBP1	96	81.916	Oryctolagus_cuniculus
ENSLAFG00000011394	TARBP1	93	42.628	ENSORLG00000010529	si:dkey-85a20.4	85	43.812	Oryzias_latipes
ENSLAFG00000011394	TARBP1	93	42.475	ENSORLG00020019264	si:dkey-85a20.4	85	43.763	Oryzias_latipes_hni
ENSLAFG00000011394	TARBP1	93	42.362	ENSORLG00015003276	si:dkey-85a20.4	85	43.710	Oryzias_latipes_hsok
ENSLAFG00000011394	TARBP1	100	79.067	ENSOGAG00000002379	TARBP1	96	78.941	Otolemur_garnettii
ENSLAFG00000011394	TARBP1	91	84.262	ENSOARG00000003434	TARBP1	94	84.022	Ovis_aries
ENSLAFG00000011394	TARBP1	86	86.113	ENSPPAG00000028097	TARBP1	99	86.260	Pan_paniscus
ENSLAFG00000011394	TARBP1	99	77.800	ENSPPRG00000013561	TARBP1	96	81.463	Panthera_pardus
ENSLAFG00000011394	TARBP1	85	85.395	ENSPTIG00000009281	TARBP1	99	85.395	Panthera_tigris_altaica
ENSLAFG00000011394	TARBP1	100	82.150	ENSPTRG00000002124	TARBP1	96	81.950	Pan_troglodytes
ENSLAFG00000011394	TARBP1	100	82.557	ENSPANG00000021933	TARBP1	96	82.368	Papio_anubis
ENSLAFG00000011394	TARBP1	99	43.478	ENSPKIG00000016716	si:dkey-85a20.4	84	46.381	Paramormyrops_kingsleyae
ENSLAFG00000011394	TARBP1	81	70.031	ENSPSIG00000010699	TARBP1	99	70.031	Pelodiscus_sinensis
ENSLAFG00000011394	TARBP1	91	74.529	ENSPEMG00000006888	Tarbp1	94	74.212	Peromyscus_maniculatus_bairdii
ENSLAFG00000011394	TARBP1	91	84.848	ENSPCIG00000029710	TARBP1	94	84.848	Phascolarctos_cinereus
ENSLAFG00000011394	TARBP1	88	44.639	ENSPFOG00000013020	si:dkey-85a20.4	99	44.709	Poecilia_formosa
ENSLAFG00000011394	TARBP1	95	43.436	ENSPLAG00000006044	si:dkey-85a20.4	85	45.060	Poecilia_latipinna
ENSLAFG00000011394	TARBP1	88	44.965	ENSPMEG00000017857	si:dkey-85a20.4	85	44.857	Poecilia_mexicana
ENSLAFG00000011394	TARBP1	95	43.279	ENSPREG00000022753	si:dkey-85a20.4	85	45.154	Poecilia_reticulata
ENSLAFG00000011394	TARBP1	91	86.063	ENSPPYG00000000102	TARBP1	96	86.244	Pongo_abelii
ENSLAFG00000011394	TARBP1	88	82.618	ENSPCAG00000004808	TARBP1	84	81.493	Procavia_capensis
ENSLAFG00000011394	TARBP1	99	80.240	ENSPCOG00000005666	TARBP1	96	80.025	Propithecus_coquereli
ENSLAFG00000011394	TARBP1	99	65.469	ENSPVAG00000014798	TARBP1	96	64.524	Pteropus_vampyrus
ENSLAFG00000011394	TARBP1	88	45.448	ENSPNYG00000019135	si:dkey-85a20.4	85	45.448	Pundamilia_nyererei
ENSLAFG00000011394	TARBP1	100	66.371	ENSRNOG00000053574	Tarbp1	96	65.421	Rattus_norvegicus
ENSLAFG00000011394	TARBP1	93	77.702	ENSRBIG00000043362	TARBP1	96	78.331	Rhinopithecus_bieti
ENSLAFG00000011394	TARBP1	92	84.141	ENSRROG00000029527	TARBP1	96	78.495	Rhinopithecus_roxellana
ENSLAFG00000011394	TARBP1	86	85.640	ENSSBOG00000034503	TARBP1	96	85.788	Saimiri_boliviensis_boliviensis
ENSLAFG00000011394	TARBP1	86	75.941	ENSSHAG00000000013	TARBP1	99	75.941	Sarcophilus_harrisii
ENSLAFG00000011394	TARBP1	87	44.595	ENSSFOG00015002660	si:dkey-85a20.4	97	45.920	Scleropages_formosus
ENSLAFG00000011394	TARBP1	94	44.287	ENSSMAG00000007081	si:dkey-85a20.4	82	46.418	Scophthalmus_maximus
ENSLAFG00000011394	TARBP1	95	42.528	ENSSDUG00000023566	si:dkey-85a20.4	85	44.076	Seriola_dumerili
ENSLAFG00000011394	TARBP1	95	44.357	ENSSLDG00000020200	si:dkey-85a20.4	86	46.100	Seriola_lalandi_dorsalis
ENSLAFG00000011394	TARBP1	87	85.047	ENSSARG00000012207	TARBP1	85	85.047	Sorex_araneus
ENSLAFG00000011394	TARBP1	99	64.353	ENSSPUG00000015364	TARBP1	96	63.826	Sphenodon_punctatus
ENSLAFG00000011394	TARBP1	88	45.652	ENSSPAG00000007213	si:dkey-85a20.4	85	45.544	Stegastes_partitus
ENSLAFG00000011394	TARBP1	100	83.218	ENSSSCG00000010160	TARBP1	96	86.151	Sus_scrofa
ENSLAFG00000011394	TARBP1	83	67.353	ENSTGUG00000010214	TARBP1	99	67.353	Taeniopygia_guttata
ENSLAFG00000011394	TARBP1	95	40.448	ENSTNIG00000016586	si:dkey-85a20.4	99	44.638	Tetraodon_nigroviridis
ENSLAFG00000011394	TARBP1	91	82.662	ENSTTRG00000008707	TARBP1	92	82.662	Tursiops_truncatus
ENSLAFG00000011394	TARBP1	84	84.528	ENSUMAG00000006730	TARBP1	99	84.528	Ursus_maritimus
ENSLAFG00000011394	TARBP1	82	94.624	ENSVPAG00000007665	TARBP1	84	94.624	Vicugna_pacos
ENSLAFG00000011394	TARBP1	88	85.580	ENSVVUG00000007460	TARBP1	97	85.600	Vulpes_vulpes
ENSLAFG00000011394	TARBP1	86	54.865	ENSXETG00000016224	tarbp1	99	54.865	Xenopus_tropicalis
ENSLAFG00000011394	TARBP1	80	49.796	ENSXCOG00000011779	si:dkey-85a20.4	93	49.796	Xiphophorus_couchianus
ENSLAFG00000011394	TARBP1	67	43.652	ENSXMAG00000009600	si:dkey-85a20.4	100	43.414	Xiphophorus_maculatus