EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000011480 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: -
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 148209 bases
Position: chrscaffold_53:7456536-7604744
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000029441	Fox-1_C	PF12414.8	6.2e-43	1	1
ENSLAFP00000009594	Fox-1_C	PF12414.8	6.4e-41	1	1
ENSLAFP00000009594	RRM_1	PF00076.22	1.5e-18	1	1
ENSLAFP00000029441	RRM_1	PF00076.22	1.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000011483	RBFOX1-201	927	-	ENSLAFP00000009594	308 (aa)	-	G3T7K4
ENSLAFT00000030533	RBFOX1-202	927	-	ENSLAFP00000029441	308 (aa)	-	G3UNN2

Gene Model

Click here to download ENSLAFG00000011480's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000011480's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000011480	RBFOX1	100	73.633	ENSLAFG00000016623	RBFOX3	77	73.633
ENSLAFG00000011480	RBFOX1	100	65.549	ENSLAFG00000027140	RBFOX2	80	64.939

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000011480	RBFOX1	100	99.351	ENSG00000078328	RBFOX1	77	99.026	Homo_sapiens
ENSLAFG00000011480	RBFOX1	100	83.172	ENSAPOG00000003197	rbfox1	72	83.172	Acanthochromis_polyacanthus
ENSLAFG00000011480	RBFOX1	87	64.646	ENSACIG00000005478	rbfox1	68	65.101	Amphilophus_citrinellus
ENSLAFG00000011480	RBFOX1	68	77.512	ENSAOCG00000008283	rbfox1	62	77.885	Amphiprion_ocellaris
ENSLAFG00000011480	RBFOX1	98	74.013	ENSAPEG00000010636	rbfox1	80	73.355	Amphiprion_percula
ENSLAFG00000011480	RBFOX1	68	77.990	ENSATEG00000007513	rbfox1	61	77.885	Anabas_testudineus
ENSLAFG00000011480	RBFOX1	100	95.779	ENSAPLG00000013263	RBFOX1	77	95.779	Anas_platyrhynchos
ENSLAFG00000011480	RBFOX1	100	88.103	ENSACAG00000004013	RBFOX1	78	88.103	Anolis_carolinensis
ENSLAFG00000011480	RBFOX1	100	99.026	ENSANAG00000029527	RBFOX1	77	99.026	Aotus_nancymaae
ENSLAFG00000011480	RBFOX1	100	99.026	ENSBTAG00000007210	RBFOX1	77	99.026	Bos_taurus
ENSLAFG00000011480	RBFOX1	100	99.351	ENSCJAG00000017351	RBFOX1	74	99.351	Callithrix_jacchus
ENSLAFG00000011480	RBFOX1	100	99.351	ENSCAFG00000019082	RBFOX1	74	99.351	Canis_familiaris
ENSLAFG00000011480	RBFOX1	61	98.930	ENSCAFG00020024881	RBFOX1	52	99.462	Canis_lupus_dingo
ENSLAFG00000011480	RBFOX1	100	99.026	ENSCHIG00000023549	RBFOX1	77	99.026	Capra_hircus
ENSLAFG00000011480	RBFOX1	100	99.351	ENSTSYG00000005334	RBFOX1	79	99.351	Carlito_syrichta
ENSLAFG00000011480	RBFOX1	100	98.701	ENSCAPG00000017669	RBFOX1	79	98.377	Cavia_aperea
ENSLAFG00000011480	RBFOX1	100	98.701	ENSCPOG00000011314	RBFOX1	78	98.377	Cavia_porcellus
ENSLAFG00000011480	RBFOX1	100	99.026	ENSCCAG00000023031	RBFOX1	74	99.026	Cebus_capucinus
ENSLAFG00000011480	RBFOX1	100	99.351	ENSCATG00000033816	RBFOX1	74	99.351	Cercocebus_atys
ENSLAFG00000011480	RBFOX1	100	99.026	ENSCLAG00000012761	RBFOX1	77	98.701	Chinchilla_lanigera
ENSLAFG00000011480	RBFOX1	81	96.800	ENSCSAG00000008739	RBFOX1	66	96.800	Chlorocebus_sabaeus
ENSLAFG00000011480	RBFOX1	100	71.429	ENSCHOG00000012843	RBFOX1	74	71.429	Choloepus_hoffmanni
ENSLAFG00000011480	RBFOX1	100	96.104	ENSCPBG00000026626	RBFOX1	77	96.104	Chrysemys_picta_bellii
ENSLAFG00000011480	RBFOX1	100	99.351	ENSCANG00000033125	RBFOX1	74	99.351	Colobus_angolensis_palliatus
ENSLAFG00000011480	RBFOX1	100	99.026	ENSCGRG00001013729	Rbfox1	78	98.701	Cricetulus_griseus_chok1gshd
ENSLAFG00000011480	RBFOX1	100	99.026	ENSCGRG00000003272	Rbfox1	78	98.701	Cricetulus_griseus_crigri
ENSLAFG00000011480	RBFOX1	100	76.849	ENSCSEG00000008840	rbfox1	76	76.849	Cynoglossus_semilaevis
ENSLAFG00000011480	RBFOX1	100	83.819	ENSDARG00000014746	rbfox1	85	80.531	Danio_rerio
ENSLAFG00000011480	RBFOX1	100	99.351	ENSDNOG00000043612	RBFOX1	74	99.351	Dasypus_novemcinctus
ENSLAFG00000011480	RBFOX1	100	98.052	ENSDORG00000010024	Rbfox1	76	98.052	Dipodomys_ordii
ENSLAFG00000011480	RBFOX1	84	87.308	ENSETEG00000003771	RBFOX1	62	87.308	Echinops_telfairi
ENSLAFG00000011480	RBFOX1	100	99.675	ENSEASG00005011599	RBFOX1	77	99.675	Equus_asinus_asinus
ENSLAFG00000011480	RBFOX1	100	99.351	ENSECAG00000012667	RBFOX1	71	99.322	Equus_caballus
ENSLAFG00000011480	RBFOX1	79	65.702	ENSELUG00000013096	rbfox1	66	64.463	Esox_lucius
ENSLAFG00000011480	RBFOX1	100	98.701	ENSFCAG00000025322	RBFOX1	70	98.701	Felis_catus
ENSLAFG00000011480	RBFOX1	79	96.281	ENSFALG00000004027	RBFOX1	72	96.281	Ficedula_albicollis
ENSLAFG00000011480	RBFOX1	100	99.026	ENSFDAG00000007388	RBFOX1	77	98.701	Fukomys_damarensis
ENSLAFG00000011480	RBFOX1	100	95.130	ENSGALG00000034325	RBFOX1	74	95.130	Gallus_gallus
ENSLAFG00000011480	RBFOX1	100	96.104	ENSGAGG00000023681	RBFOX1	81	96.104	Gopherus_agassizii
ENSLAFG00000011480	RBFOX1	100	99.351	ENSGGOG00000016871	-	74	99.351	Gorilla_gorilla
ENSLAFG00000011480	RBFOX1	100	99.026	ENSHGLG00000016944	RBFOX1	77	98.701	Heterocephalus_glaber_female
ENSLAFG00000011480	RBFOX1	100	99.026	ENSHGLG00100003272	RBFOX1	77	98.701	Heterocephalus_glaber_male
ENSLAFG00000011480	RBFOX1	87	73.993	ENSHCOG00000016419	rbfox1	69	73.993	Hippocampus_comes
ENSLAFG00000011480	RBFOX1	100	85.065	ENSIPUG00000015215	rbfox1	80	85.065	Ictalurus_punctatus
ENSLAFG00000011480	RBFOX1	100	98.377	ENSSTOG00000000322	RBFOX1	78	98.052	Ictidomys_tridecemlineatus
ENSLAFG00000011480	RBFOX1	100	99.026	ENSJJAG00000002575	Rbfox1	79	98.701	Jaculus_jaculus
ENSLAFG00000011480	RBFOX1	100	78.065	ENSLBEG00000014659	rbfox1	75	77.419	Labrus_bergylta
ENSLAFG00000011480	RBFOX1	100	86.495	ENSLOCG00000006675	rbfox1	78	86.495	Lepisosteus_oculatus
ENSLAFG00000011480	RBFOX1	100	99.351	ENSMFAG00000036447	RBFOX1	74	99.351	Macaca_fascicularis
ENSLAFG00000011480	RBFOX1	100	99.351	ENSMMUG00000003458	RBFOX1	78	99.026	Macaca_mulatta
ENSLAFG00000011480	RBFOX1	100	99.351	ENSMNEG00000032034	RBFOX1	74	99.351	Macaca_nemestrina
ENSLAFG00000011480	RBFOX1	100	99.351	ENSMLEG00000015382	RBFOX1	74	99.351	Mandrillus_leucophaeus
ENSLAFG00000011480	RBFOX1	100	80.906	ENSMAMG00000003142	rbfox1	77	80.906	Mastacembelus_armatus
ENSLAFG00000011480	RBFOX1	65	88.945	ENSMGAG00000008606	RBFOX1	67	88.660	Meleagris_gallopavo
ENSLAFG00000011480	RBFOX1	96	50.825	ENSMAUG00000020570	Rbfox1	77	50.495	Mesocricetus_auratus
ENSLAFG00000011480	RBFOX1	100	90.260	ENSMICG00000034286	RBFOX1	75	90.260	Microcebus_murinus
ENSLAFG00000011480	RBFOX1	100	98.701	ENSMOCG00000020932	Rbfox1	80	98.377	Microtus_ochrogaster
ENSLAFG00000011480	RBFOX1	87	74.349	ENSMMOG00000009716	rbfox1	66	73.606	Mola_mola
ENSLAFG00000011480	RBFOX1	81	95.600	ENSMODG00000005826	RBFOX1	70	95.600	Monodelphis_domestica
ENSLAFG00000011480	RBFOX1	100	81.877	ENSMALG00000003337	rbfox1	73	81.877	Monopterus_albus
ENSLAFG00000011480	RBFOX1	100	99.026	MGP_CAROLIEiJ_G0020427	Rbfox1	78	98.701	Mus_caroli
ENSLAFG00000011480	RBFOX1	100	98.701	ENSMUSG00000008658	Rbfox1	100	100.000	Mus_musculus
ENSLAFG00000011480	RBFOX1	100	99.026	MGP_PahariEiJ_G0016135	Rbfox1	78	98.701	Mus_pahari
ENSLAFG00000011480	RBFOX1	100	98.377	MGP_SPRETEiJ_G0021321	Rbfox1	78	98.052	Mus_spretus
ENSLAFG00000011480	RBFOX1	81	96.400	ENSMPUG00000014822	RBFOX1	63	96.400	Mustela_putorius_furo
ENSLAFG00000011480	RBFOX1	100	99.351	ENSMLUG00000015896	RBFOX1	100	99.351	Myotis_lucifugus
ENSLAFG00000011480	RBFOX1	100	98.701	ENSNGAG00000023276	Rbfox1	79	98.377	Nannospalax_galili
ENSLAFG00000011480	RBFOX1	100	66.032	ENSNBRG00000011084	rbfox1	71	66.032	Neolamprologus_brichardi
ENSLAFG00000011480	RBFOX1	100	99.026	ENSNLEG00000010017	-	74	99.026	Nomascus_leucogenys
ENSLAFG00000011480	RBFOX1	100	77.273	ENSMEUG00000012525	RBFOX1	74	77.273	Notamacropus_eugenii
ENSLAFG00000011480	RBFOX1	100	74.675	ENSOPRG00000006199	-	74	74.675	Ochotona_princeps
ENSLAFG00000011480	RBFOX1	100	99.026	ENSODEG00000013166	RBFOX1	78	98.701	Octodon_degus
ENSLAFG00000011480	RBFOX1	81	94.400	ENSOANG00000002379	RBFOX1	66	94.400	Ornithorhynchus_anatinus
ENSLAFG00000011480	RBFOX1	100	99.026	ENSOGAG00000025535	RBFOX1	77	99.026	Otolemur_garnettii
ENSLAFG00000011480	RBFOX1	53	87.654	ENSOARG00000005135	RBFOX1	64	88.199	Ovis_aries
ENSLAFG00000011480	RBFOX1	100	99.026	ENSPPAG00000036238	-	79	99.026	Pan_paniscus
ENSLAFG00000011480	RBFOX1	100	99.026	ENSPPRG00000006546	RBFOX1	74	99.026	Panthera_pardus
ENSLAFG00000011480	RBFOX1	99	85.621	ENSPTIG00000021154	RBFOX1	77	84.365	Panthera_tigris_altaica
ENSLAFG00000011480	RBFOX1	100	99.351	ENSPTRG00000007744	RBFOX1	74	99.351	Pan_troglodytes
ENSLAFG00000011480	RBFOX1	100	99.351	ENSPANG00000026500	RBFOX1	74	99.351	Papio_anubis
ENSLAFG00000011480	RBFOX1	100	83.766	ENSPKIG00000009667	-	75	82.828	Paramormyrops_kingsleyae
ENSLAFG00000011480	RBFOX1	68	83.254	ENSPKIG00000019353	rbfox1	59	83.254	Paramormyrops_kingsleyae
ENSLAFG00000011480	RBFOX1	100	96.104	ENSPSIG00000006523	RBFOX1	77	96.104	Pelodiscus_sinensis
ENSLAFG00000011480	RBFOX1	100	99.026	ENSPEMG00000017607	Rbfox1	78	98.701	Peromyscus_maniculatus_bairdii
ENSLAFG00000011480	RBFOX1	94	93.127	ENSPCIG00000026887	RBFOX1	100	93.127	Phascolarctos_cinereus
ENSLAFG00000011480	RBFOX1	81	96.800	ENSPPYG00000007079	-	63	96.800	Pongo_abelii
ENSLAFG00000011480	RBFOX1	87	99.254	ENSPCAG00000002630	RBFOX1	71	99.254	Procavia_capensis
ENSLAFG00000011480	RBFOX1	100	99.351	ENSPCOG00000025687	RBFOX1	74	99.351	Propithecus_coquereli
ENSLAFG00000011480	RBFOX1	100	94.156	ENSPVAG00000013467	RBFOX1	74	94.156	Pteropus_vampyrus
ENSLAFG00000011480	RBFOX1	100	85.714	ENSPNAG00000023109	rbfox1	76	85.714	Pygocentrus_nattereri
ENSLAFG00000011480	RBFOX1	100	98.377	ENSRNOG00000002827	Rbfox1	74	98.377	Rattus_norvegicus
ENSLAFG00000011480	RBFOX1	100	99.026	ENSRBIG00000044478	RBFOX1	79	99.026	Rhinopithecus_bieti
ENSLAFG00000011480	RBFOX1	100	99.351	ENSRROG00000044411	RBFOX1	74	99.351	Rhinopithecus_roxellana
ENSLAFG00000011480	RBFOX1	100	98.701	ENSSBOG00000033726	RBFOX1	77	98.701	Saimiri_boliviensis_boliviensis
ENSLAFG00000011480	RBFOX1	100	93.182	ENSSHAG00000009257	RBFOX1	77	93.182	Sarcophilus_harrisii
ENSLAFG00000011480	RBFOX1	87	79.104	ENSSFOG00015009955	-	61	78.731	Scleropages_formosus
ENSLAFG00000011480	RBFOX1	100	64.423	ENSSFOG00015023675	rbfox1	73	87.778	Scleropages_formosus
ENSLAFG00000011480	RBFOX1	100	82.258	ENSSMAG00000015505	rbfox1	69	82.258	Scophthalmus_maximus
ENSLAFG00000011480	RBFOX1	100	77.994	ENSSDUG00000016413	rbfox1	75	77.670	Seriola_dumerili
ENSLAFG00000011480	RBFOX1	87	75.093	ENSSLDG00000009353	rbfox1	64	78.261	Seriola_lalandi_dorsalis
ENSLAFG00000011480	RBFOX1	55	100.000	ENSSARG00000004936	-	70	100.000	Sorex_araneus
ENSLAFG00000011480	RBFOX1	87	81.343	ENSSPUG00000009732	RBFOX1	66	81.343	Sphenodon_punctatus
ENSLAFG00000011480	RBFOX1	100	82.201	ENSSPAG00000009723	rbfox1	74	82.201	Stegastes_partitus
ENSLAFG00000011480	RBFOX1	96	98.983	ENSSSCG00000007917	RBFOX1	71	98.983	Sus_scrofa
ENSLAFG00000011480	RBFOX1	100	96.104	ENSTGUG00000004562	RBFOX1	79	96.104	Taeniopygia_guttata
ENSLAFG00000011480	RBFOX1	100	82.258	ENSTRUG00000020940	rbfox1	74	81.877	Takifugu_rubripes
ENSLAFG00000011480	RBFOX1	87	57.143	ENSTNIG00000002567	rbfox1	100	58.730	Tetraodon_nigroviridis
ENSLAFG00000011480	RBFOX1	100	76.623	ENSTBEG00000009169	-	74	76.623	Tupaia_belangeri
ENSLAFG00000011480	RBFOX1	100	99.351	ENSTTRG00000005700	RBFOX1	74	99.351	Tursiops_truncatus
ENSLAFG00000011480	RBFOX1	100	93.506	ENSUAMG00000024633	RBFOX1	77	93.506	Ursus_americanus
ENSLAFG00000011480	RBFOX1	100	82.143	ENSUMAG00000003579	RBFOX1	76	82.143	Ursus_maritimus
ENSLAFG00000011480	RBFOX1	100	99.351	ENSVPAG00000001284	RBFOX1	74	99.351	Vicugna_pacos
ENSLAFG00000011480	RBFOX1	100	98.701	ENSVVUG00000017311	RBFOX1	70	98.701	Vulpes_vulpes