EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000011513 (Gene tree)
Gene ID: -
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 27395 bases
Position: chrscaffold_71:8250297-8277691
Accession: 100659188
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000009624	CPSF_A	PF03178.15	3.7e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000011520	DDB1-201	3423	-	ENSLAFP00000009624	1140 (aa)	XP_003419416	G3T7M9

Gene Model

Click here to download ENSLAFG00000011513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000011513's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000011513	DDB1	100	99.649	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSLAFG00000011513	DDB1	98	91.285	ENSAPOG00000005036	ddb1	99	91.327	Acanthochromis_polyacanthus
ENSLAFG00000011513	DDB1	100	99.737	ENSAMEG00000016518	DDB1	100	99.737	Ailuropoda_melanoleuca
ENSLAFG00000011513	DDB1	86	91.633	ENSACIG00000020624	ddb1	99	91.633	Amphilophus_citrinellus
ENSLAFG00000011513	DDB1	100	90.965	ENSAOCG00000003066	ddb1	100	90.965	Amphiprion_ocellaris
ENSLAFG00000011513	DDB1	100	91.053	ENSAPEG00000000092	ddb1	100	91.053	Amphiprion_percula
ENSLAFG00000011513	DDB1	94	91.535	ENSATEG00000020571	ddb1	97	91.535	Anabas_testudineus
ENSLAFG00000011513	DDB1	98	96.267	ENSAPLG00000007174	DDB1	99	96.267	Anas_platyrhynchos
ENSLAFG00000011513	DDB1	100	96.930	ENSACAG00000017758	DDB1	100	96.930	Anolis_carolinensis
ENSLAFG00000011513	DDB1	100	99.649	ENSANAG00000021878	DDB1	100	99.649	Aotus_nancymaae
ENSLAFG00000011513	DDB1	100	91.316	ENSACLG00000012401	ddb1	100	91.316	Astatotilapia_calliptera
ENSLAFG00000011513	DDB1	100	99.561	ENSBTAG00000021569	DDB1	93	99.561	Bos_taurus
ENSLAFG00000011513	DDB1	100	37.126	WBGene00010890	ddb-1	100	37.040	Caenorhabditis_elegans
ENSLAFG00000011513	DDB1	100	99.649	ENSCJAG00000019319	DDB1	100	99.649	Callithrix_jacchus
ENSLAFG00000011513	DDB1	100	99.737	ENSCAFG00000016264	DDB1	100	99.737	Canis_familiaris
ENSLAFG00000011513	DDB1	94	99.442	ENSCAFG00020012722	DDB1	99	99.442	Canis_lupus_dingo
ENSLAFG00000011513	DDB1	100	99.561	ENSCHIG00000014969	DDB1	100	99.561	Capra_hircus
ENSLAFG00000011513	DDB1	100	98.947	ENSTSYG00000008027	DDB1	100	98.947	Carlito_syrichta
ENSLAFG00000011513	DDB1	98	98.928	ENSCAPG00000010786	DDB1	100	98.928	Cavia_aperea
ENSLAFG00000011513	DDB1	100	98.947	ENSCPOG00000009956	DDB1	100	98.947	Cavia_porcellus
ENSLAFG00000011513	DDB1	100	99.649	ENSCCAG00000035883	DDB1	100	99.649	Cebus_capucinus
ENSLAFG00000011513	DDB1	100	97.135	ENSCATG00000044495	DDB1	100	97.135	Cercocebus_atys
ENSLAFG00000011513	DDB1	100	99.035	ENSCLAG00000004126	DDB1	100	99.035	Chinchilla_lanigera
ENSLAFG00000011513	DDB1	100	99.649	ENSCSAG00000006392	DDB1	100	99.649	Chlorocebus_sabaeus
ENSLAFG00000011513	DDB1	88	92.803	ENSCHOG00000011377	DDB1	90	92.803	Choloepus_hoffmanni
ENSLAFG00000011513	DDB1	100	97.632	ENSCPBG00000017728	DDB1	100	97.632	Chrysemys_picta_bellii
ENSLAFG00000011513	DDB1	100	61.719	ENSCING00000007437	-	100	61.632	Ciona_intestinalis
ENSLAFG00000011513	DDB1	94	60.092	ENSCSAVG00000004783	-	100	60.092	Ciona_savignyi
ENSLAFG00000011513	DDB1	100	99.649	ENSCANG00000019948	DDB1	100	99.649	Colobus_angolensis_palliatus
ENSLAFG00000011513	DDB1	100	99.649	ENSCGRG00001016599	Ddb1	100	99.649	Cricetulus_griseus_chok1gshd
ENSLAFG00000011513	DDB1	100	99.649	ENSCGRG00000013427	Ddb1	100	99.649	Cricetulus_griseus_crigri
ENSLAFG00000011513	DDB1	93	90.952	ENSCSEG00000012499	ddb1	99	89.372	Cynoglossus_semilaevis
ENSLAFG00000011513	DDB1	94	91.240	ENSCVAG00000019531	ddb1	99	91.240	Cyprinodon_variegatus
ENSLAFG00000011513	DDB1	100	88.179	ENSDARG00000074431	ddb1	100	88.297	Danio_rerio
ENSLAFG00000011513	DDB1	94	99.070	ENSDNOG00000014884	DDB1	97	99.070	Dasypus_novemcinctus
ENSLAFG00000011513	DDB1	84	100.000	ENSDORG00000000127	Ddb1	100	100.000	Dipodomys_ordii
ENSLAFG00000011513	DDB1	100	60.873	FBgn0260962	pic	100	60.664	Drosophila_melanogaster
ENSLAFG00000011513	DDB1	71	100.000	ENSETEG00000001053	-	71	100.000	Echinops_telfairi
ENSLAFG00000011513	DDB1	78	84.814	ENSEBUG00000014593	ddb1	97	84.814	Eptatretus_burgeri
ENSLAFG00000011513	DDB1	100	99.561	ENSEASG00005008184	DDB1	100	99.561	Equus_asinus_asinus
ENSLAFG00000011513	DDB1	100	99.474	ENSECAG00000012136	DDB1	100	99.474	Equus_caballus
ENSLAFG00000011513	DDB1	85	97.475	ENSEEUG00000003194	DDB1	85	97.475	Erinaceus_europaeus
ENSLAFG00000011513	DDB1	100	91.053	ENSELUG00000023868	ddb1	100	91.053	Esox_lucius
ENSLAFG00000011513	DDB1	100	99.737	ENSFCAG00000029716	DDB1	100	99.737	Felis_catus
ENSLAFG00000011513	DDB1	100	96.675	ENSFALG00000011981	DDB1	100	96.675	Ficedula_albicollis
ENSLAFG00000011513	DDB1	100	98.947	ENSFDAG00000005128	DDB1	100	98.947	Fukomys_damarensis
ENSLAFG00000011513	DDB1	90	90.588	ENSFHEG00000022133	ddb1	98	90.588	Fundulus_heteroclitus
ENSLAFG00000011513	DDB1	79	94.649	ENSGMOG00000019386	ddb1	94	94.649	Gadus_morhua
ENSLAFG00000011513	DDB1	100	96.842	ENSGALG00000042333	DDB1	100	96.842	Gallus_gallus
ENSLAFG00000011513	DDB1	94	91.053	ENSGAFG00000013142	ddb1	99	91.053	Gambusia_affinis
ENSLAFG00000011513	DDB1	96	90.467	ENSGACG00000017182	ddb1	100	90.467	Gasterosteus_aculeatus
ENSLAFG00000011513	DDB1	95	97.694	ENSGAGG00000014124	DDB1	100	97.694	Gopherus_agassizii
ENSLAFG00000011513	DDB1	100	99.649	ENSGGOG00000004052	DDB1	100	99.649	Gorilla_gorilla
ENSLAFG00000011513	DDB1	100	91.316	ENSHBUG00000008873	ddb1	100	91.316	Haplochromis_burtoni
ENSLAFG00000011513	DDB1	100	98.947	ENSHGLG00000018430	DDB1	100	98.947	Heterocephalus_glaber_female
ENSLAFG00000011513	DDB1	100	97.982	ENSHGLG00100014475	DDB1	100	97.982	Heterocephalus_glaber_male
ENSLAFG00000011513	DDB1	94	90.799	ENSHCOG00000018670	ddb1	98	90.799	Hippocampus_comes
ENSLAFG00000011513	DDB1	100	90.351	ENSIPUG00000005612	DDB1	100	90.351	Ictalurus_punctatus
ENSLAFG00000011513	DDB1	100	99.649	ENSSTOG00000007552	DDB1	100	99.649	Ictidomys_tridecemlineatus
ENSLAFG00000011513	DDB1	100	99.474	ENSJJAG00000017769	Ddb1	100	99.474	Jaculus_jaculus
ENSLAFG00000011513	DDB1	94	91.146	ENSKMAG00000002315	ddb1	99	91.146	Kryptolebias_marmoratus
ENSLAFG00000011513	DDB1	85	91.295	ENSLBEG00000017065	ddb1	99	91.295	Labrus_bergylta
ENSLAFG00000011513	DDB1	100	93.345	ENSLACG00000017611	DDB1	100	93.345	Latimeria_chalumnae
ENSLAFG00000011513	DDB1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSLAFG00000011513	DDB1	100	99.649	ENSMFAG00000042035	DDB1	100	99.649	Macaca_fascicularis
ENSLAFG00000011513	DDB1	99	99.646	ENSMMUG00000002691	DDB1	99	99.646	Macaca_mulatta
ENSLAFG00000011513	DDB1	100	99.649	ENSMNEG00000031559	DDB1	100	99.649	Macaca_nemestrina
ENSLAFG00000011513	DDB1	100	99.649	ENSMLEG00000044136	DDB1	100	99.649	Mandrillus_leucophaeus
ENSLAFG00000011513	DDB1	100	91.316	ENSMAMG00000014372	ddb1	100	91.316	Mastacembelus_armatus
ENSLAFG00000011513	DDB1	100	91.228	ENSMZEG00005013835	ddb1	100	91.228	Maylandia_zebra
ENSLAFG00000011513	DDB1	94	96.182	ENSMGAG00000004990	DDB1	100	96.182	Meleagris_gallopavo
ENSLAFG00000011513	DDB1	100	99.649	ENSMAUG00000012926	Ddb1	100	99.649	Mesocricetus_auratus
ENSLAFG00000011513	DDB1	100	99.649	ENSMICG00000013703	DDB1	100	99.649	Microcebus_murinus
ENSLAFG00000011513	DDB1	100	99.386	ENSMOCG00000020499	Ddb1	100	99.386	Microtus_ochrogaster
ENSLAFG00000011513	DDB1	86	91.633	ENSMMOG00000001758	ddb1	99	91.633	Mola_mola
ENSLAFG00000011513	DDB1	100	89.014	ENSMODG00000020353	DDB1	100	89.014	Monodelphis_domestica
ENSLAFG00000011513	DDB1	100	91.316	ENSMALG00000014071	ddb1	100	91.316	Monopterus_albus
ENSLAFG00000011513	DDB1	100	99.561	MGP_CAROLIEiJ_G0022695	Ddb1	100	99.561	Mus_caroli
ENSLAFG00000011513	DDB1	100	99.474	ENSMUSG00000024740	Ddb1	100	99.474	Mus_musculus
ENSLAFG00000011513	DDB1	100	99.561	MGP_PahariEiJ_G0014189	Ddb1	100	99.561	Mus_pahari
ENSLAFG00000011513	DDB1	100	99.561	MGP_SPRETEiJ_G0023609	Ddb1	100	99.561	Mus_spretus
ENSLAFG00000011513	DDB1	100	96.404	ENSMPUG00000014200	DDB1	100	96.404	Mustela_putorius_furo
ENSLAFG00000011513	DDB1	100	99.123	ENSMLUG00000013232	DDB1	100	99.123	Myotis_lucifugus
ENSLAFG00000011513	DDB1	100	99.211	ENSNGAG00000009384	Ddb1	100	99.211	Nannospalax_galili
ENSLAFG00000011513	DDB1	100	91.404	ENSNBRG00000019581	ddb1	100	91.404	Neolamprologus_brichardi
ENSLAFG00000011513	DDB1	100	96.528	ENSNLEG00000002022	DDB1	100	96.528	Nomascus_leucogenys
ENSLAFG00000011513	DDB1	90	99.648	ENSMEUG00000001099	DDB1	92	99.648	Notamacropus_eugenii
ENSLAFG00000011513	DDB1	90	90.786	ENSOPRG00000008254	DDB1	90	90.786	Ochotona_princeps
ENSLAFG00000011513	DDB1	100	98.860	ENSODEG00000002419	DDB1	100	98.860	Octodon_degus
ENSLAFG00000011513	DDB1	100	91.316	ENSONIG00000005804	ddb1	100	91.316	Oreochromis_niloticus
ENSLAFG00000011513	DDB1	91	97.868	ENSOANG00000004897	DDB1	100	97.868	Ornithorhynchus_anatinus
ENSLAFG00000011513	DDB1	100	99.649	ENSOCUG00000001667	DDB1	100	99.649	Oryctolagus_cuniculus
ENSLAFG00000011513	DDB1	96	89.734	ENSORLG00000001399	ddb1	98	90.970	Oryzias_latipes
ENSLAFG00000011513	DDB1	96	89.643	ENSORLG00020001277	ddb1	97	89.643	Oryzias_latipes_hni
ENSLAFG00000011513	DDB1	94	90.791	ENSORLG00015002080	ddb1	99	90.791	Oryzias_latipes_hsok
ENSLAFG00000011513	DDB1	96	89.608	ENSOMEG00000006181	ddb1	99	89.608	Oryzias_melastigma
ENSLAFG00000011513	DDB1	100	99.474	ENSOGAG00000016103	DDB1	100	99.474	Otolemur_garnettii
ENSLAFG00000011513	DDB1	99	99.555	ENSOARG00000011716	DDB1	98	99.555	Ovis_aries
ENSLAFG00000011513	DDB1	100	99.649	ENSPPAG00000035343	DDB1	100	99.649	Pan_paniscus
ENSLAFG00000011513	DDB1	100	99.737	ENSPPRG00000013300	DDB1	100	99.737	Panthera_pardus
ENSLAFG00000011513	DDB1	98	99.732	ENSPTIG00000006909	DDB1	98	99.732	Panthera_tigris_altaica
ENSLAFG00000011513	DDB1	100	99.649	ENSPTRG00000003737	DDB1	100	99.649	Pan_troglodytes
ENSLAFG00000011513	DDB1	100	99.649	ENSPANG00000000242	DDB1	100	99.649	Papio_anubis
ENSLAFG00000011513	DDB1	94	91.146	ENSPKIG00000019213	ddb1	94	91.146	Paramormyrops_kingsleyae
ENSLAFG00000011513	DDB1	98	96.797	ENSPSIG00000013275	DDB1	100	96.797	Pelodiscus_sinensis
ENSLAFG00000011513	DDB1	86	91.327	ENSPMGG00000021179	ddb1	99	91.327	Periophthalmus_magnuspinnatus
ENSLAFG00000011513	DDB1	100	99.649	ENSPEMG00000012241	Ddb1	100	99.649	Peromyscus_maniculatus_bairdii
ENSLAFG00000011513	DDB1	89	86.640	ENSPMAG00000008479	ddb1	100	86.640	Petromyzon_marinus
ENSLAFG00000011513	DDB1	100	98.772	ENSPCIG00000002643	DDB1	100	98.772	Phascolarctos_cinereus
ENSLAFG00000011513	DDB1	100	90.710	ENSPFOG00000002768	ddb1	100	90.710	Poecilia_formosa
ENSLAFG00000011513	DDB1	100	90.526	ENSPLAG00000017227	ddb1	100	90.526	Poecilia_latipinna
ENSLAFG00000011513	DDB1	100	90.526	ENSPMEG00000011398	ddb1	100	90.526	Poecilia_mexicana
ENSLAFG00000011513	DDB1	94	91.163	ENSPREG00000004440	ddb1	98	91.163	Poecilia_reticulata
ENSLAFG00000011513	DDB1	100	94.677	ENSPPYG00000003193	DDB1	100	94.677	Pongo_abelii
ENSLAFG00000011513	DDB1	85	99.403	ENSPCAG00000011040	DDB1	85	99.403	Procavia_capensis
ENSLAFG00000011513	DDB1	100	98.074	ENSPCOG00000015176	DDB1	100	98.074	Propithecus_coquereli
ENSLAFG00000011513	DDB1	100	99.561	ENSPVAG00000003847	DDB1	100	99.561	Pteropus_vampyrus
ENSLAFG00000011513	DDB1	94	91.146	ENSPNAG00000006635	ddb1	97	91.146	Pygocentrus_nattereri
ENSLAFG00000011513	DDB1	100	99.561	ENSRNOG00000020715	Ddb1	100	99.561	Rattus_norvegicus
ENSLAFG00000011513	DDB1	100	99.649	ENSRBIG00000033611	DDB1	100	99.649	Rhinopithecus_bieti
ENSLAFG00000011513	DDB1	100	99.649	ENSRROG00000041407	DDB1	100	99.649	Rhinopithecus_roxellana
ENSLAFG00000011513	DDB1	100	99.561	ENSSBOG00000019775	DDB1	100	99.561	Saimiri_boliviensis_boliviensis
ENSLAFG00000011513	DDB1	94	96.729	ENSSHAG00000011600	DDB1	100	96.729	Sarcophilus_harrisii
ENSLAFG00000011513	DDB1	94	91.264	ENSSFOG00015011151	ddb1	97	91.264	Scleropages_formosus
ENSLAFG00000011513	DDB1	100	90.877	ENSSMAG00000009495	ddb1	100	90.877	Scophthalmus_maximus
ENSLAFG00000011513	DDB1	100	91.228	ENSSDUG00000004642	ddb1	100	91.228	Seriola_dumerili
ENSLAFG00000011513	DDB1	100	91.228	ENSSLDG00000015804	ddb1	100	91.228	Seriola_lalandi_dorsalis
ENSLAFG00000011513	DDB1	70	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSLAFG00000011513	DDB1	100	97.632	ENSSPUG00000019338	DDB1	100	97.632	Sphenodon_punctatus
ENSLAFG00000011513	DDB1	94	91.442	ENSSPAG00000009888	ddb1	99	91.442	Stegastes_partitus
ENSLAFG00000011513	DDB1	100	98.684	ENSSSCG00000013094	DDB1	100	98.684	Sus_scrofa
ENSLAFG00000011513	DDB1	100	96.842	ENSTGUG00000006414	DDB1	100	96.842	Taeniopygia_guttata
ENSLAFG00000011513	DDB1	94	90.121	ENSTRUG00000016682	ddb1	98	90.121	Takifugu_rubripes
ENSLAFG00000011513	DDB1	88	84.830	ENSTNIG00000009565	ddb1	99	84.830	Tetraodon_nigroviridis
ENSLAFG00000011513	DDB1	92	94.648	ENSTTRG00000011055	DDB1	94	94.648	Tursiops_truncatus
ENSLAFG00000011513	DDB1	94	99.442	ENSUAMG00000017793	DDB1	93	99.442	Ursus_americanus
ENSLAFG00000011513	DDB1	94	99.442	ENSUMAG00000011788	DDB1	98	99.442	Ursus_maritimus
ENSLAFG00000011513	DDB1	90	100.000	ENSVPAG00000007963	DDB1	92	100.000	Vicugna_pacos
ENSLAFG00000011513	DDB1	100	99.649	ENSVVUG00000004987	DDB1	100	99.649	Vulpes_vulpes
ENSLAFG00000011513	DDB1	100	93.182	ENSXETG00000008820	ddb1	100	93.182	Xenopus_tropicalis
ENSLAFG00000011513	DDB1	86	91.122	ENSXCOG00000013956	ddb1	99	91.122	Xiphophorus_couchianus
ENSLAFG00000011513	DDB1	94	91.053	ENSXMAG00000000022	ddb1	99	91.053	Xiphophorus_maculatus