EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000011531 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 2094 bases
Position: chrscaffold_39:8363796-8365889
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000009631	KH_1	PF00013.29	1.2e-10	1	1
ENSLAFP00000020655	KH_1	PF00013.29	1.2e-10	1	1
ENSLAFP00000009631	DEAD	PF00270.29	1.9e-41	1	1
ENSLAFP00000020655	DEAD	PF00270.29	2.2e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000011527	-	1893	-	ENSLAFP00000009631	631 (aa)	-	G3T7N6
ENSLAFT00000026399	-	1959	-	ENSLAFP00000020655	652 (aa)	-	G3TYJ7

Gene Model

Click here to download ENSLAFG00000011531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000011531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000011531	-	54	38.504	ENSLAFG00000006915	DDX18	52	38.504
ENSLAFG00000011531	-	58	39.119	ENSLAFG00000017378	DDX3X	61	38.329
ENSLAFG00000011531	-	69	43.919	ENSLAFG00000009820	-	89	43.919
ENSLAFG00000011531	-	60	36.935	ENSLAFG00000015474	DDX47	84	36.935
ENSLAFG00000011531	-	55	32.787	ENSLAFG00000002635	DDX52	96	32.653
ENSLAFG00000011531	-	55	33.428	ENSLAFG00000003619	EIF4A2	85	33.428
ENSLAFG00000011531	-	68	36.018	ENSLAFG00000026418	DDX41	72	36.018
ENSLAFG00000011531	-	61	39.747	ENSLAFG00000005900	DDX4	56	39.747
ENSLAFG00000011531	-	55	31.522	ENSLAFG00000006651	-	73	31.522
ENSLAFG00000011531	-	59	30.227	ENSLAFG00000005951	DDX10	54	30.986
ENSLAFG00000011531	-	56	32.295	ENSLAFG00000015628	EIF4A3	84	32.295
ENSLAFG00000011531	-	69	44.270	ENSLAFG00000004461	DDX5	71	42.979
ENSLAFG00000011531	-	63	32.494	ENSLAFG00000011012	DDX6	79	32.494
ENSLAFG00000011531	-	93	73.514	ENSLAFG00000012755	-	97	73.514
ENSLAFG00000011531	-	56	31.044	ENSLAFG00000000532	DDX25	73	31.044
ENSLAFG00000011531	-	60	33.679	ENSLAFG00000002934	DDX49	78	33.679
ENSLAFG00000011531	-	55	31.250	ENSLAFG00000006659	DDX19A	73	31.250
ENSLAFG00000011531	-	64	38.128	ENSLAFG00000014227	DDX23	52	38.128
ENSLAFG00000011531	-	56	32.865	ENSLAFG00000001107	EIF4A1	86	32.865

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000011531	-	95	73.913	ENSAMEG00000019953	-	99	73.267	Ailuropoda_melanoleuca
ENSLAFG00000011531	-	94	73.019	ENSBTAG00000046635	-	96	73.019	Bos_taurus
ENSLAFG00000011531	-	60	76.640	ENSCAFG00020005312	-	82	76.440	Canis_lupus_dingo
ENSLAFG00000011531	-	97	72.920	ENSCHIG00000020582	-	99	73.083	Capra_hircus
ENSLAFG00000011531	-	95	68.750	ENSCPOG00000013960	-	99	65.000	Cavia_porcellus
ENSLAFG00000011531	-	95	67.317	ENSCLAG00000017424	-	91	67.317	Chinchilla_lanigera
ENSLAFG00000011531	-	99	71.338	ENSEASG00005001728	-	97	71.975	Equus_asinus_asinus
ENSLAFG00000011531	-	99	70.541	ENSECAG00000035665	-	100	71.178	Equus_caballus
ENSLAFG00000011531	-	99	70.701	ENSECAG00000037015	DDX53	100	71.338	Equus_caballus
ENSLAFG00000011531	-	51	87.879	ENSEEUG00000008838	-	79	87.879	Erinaceus_europaeus
ENSLAFG00000011531	-	69	67.277	ENSFDAG00000018215	-	96	66.370	Fukomys_damarensis
ENSLAFG00000011531	-	79	70.423	ENSFDAG00000020660	-	97	70.423	Fukomys_damarensis
ENSLAFG00000011531	-	96	71.870	ENSSTOG00000027719	-	82	71.870	Ictidomys_tridecemlineatus
ENSLAFG00000011531	-	94	76.007	ENSMPUG00000019441	-	99	75.288	Mustela_putorius_furo
ENSLAFG00000011531	-	99	68.711	ENSMLUG00000022321	-	99	69.074	Myotis_lucifugus
ENSLAFG00000011531	-	94	71.886	ENSMLUG00000022233	-	99	70.888	Myotis_lucifugus
ENSLAFG00000011531	-	99	70.110	ENSOCUG00000004437	-	100	70.736	Oryctolagus_cuniculus
ENSLAFG00000011531	-	99	67.512	ENSOGAG00000026282	-	99	67.512	Otolemur_garnettii
ENSLAFG00000011531	-	96	73.159	ENSOARG00000016525	-	100	73.322	Ovis_aries
ENSLAFG00000011531	-	99	71.516	ENSPPRG00000011327	-	99	71.889	Panthera_pardus
ENSLAFG00000011531	-	92	76.804	ENSPTIG00000001243	-	99	71.472	Panthera_tigris_altaica
ENSLAFG00000011531	-	99	73.016	ENSPVAG00000001484	-	99	73.089	Pteropus_vampyrus
ENSLAFG00000011531	-	99	75.397	ENSSSCG00000012169	-	100	75.397	Sus_scrofa
ENSLAFG00000011531	-	59	50.532	ENSTBEG00000001513	-	97	50.000	Tupaia_belangeri
ENSLAFG00000011531	-	99	69.085	ENSTBEG00000014650	-	99	69.475	Tupaia_belangeri
ENSLAFG00000011531	-	99	64.184	ENSTTRG00000016514	-	99	64.229	Tursiops_truncatus
ENSLAFG00000011531	-	95	77.592	ENSUAMG00000000177	-	96	76.423	Ursus_americanus
ENSLAFG00000011531	-	59	83.333	ENSUMAG00000011448	-	84	83.333	Ursus_maritimus
ENSLAFG00000011531	-	99	72.930	ENSVPAG00000007860	-	99	72.930	Vicugna_pacos
ENSLAFG00000011531	-	97	74.272	ENSVVUG00000012789	-	99	74.272	Vulpes_vulpes