EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000011655 (Gene tree)
Gene ID: -
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 7166 bases
Position: chrscaffold_49:6977482-6984647
Accession: 27561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000009737	tRNA_int_end_N2	PF12928.7	2.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000011656	TSEN54-201	1578	-	ENSLAFP00000009737	525 (aa)	-	G3T7X2

Gene Model

Click here to download ENSLAFG00000011655's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000011655's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000011655	TSEN54	99	76.749	ENSG00000182173	TSEN54	100	93.056	Homo_sapiens
ENSLAFG00000011655	TSEN54	92	45.214	ENSAPOG00000009659	tsen54	99	42.459	Acanthochromis_polyacanthus
ENSLAFG00000011655	TSEN54	99	79.434	ENSAMEG00000009414	TSEN54	93	83.871	Ailuropoda_melanoleuca
ENSLAFG00000011655	TSEN54	92	45.842	ENSAOCG00000000152	tsen54	72	64.384	Amphiprion_ocellaris
ENSLAFG00000011655	TSEN54	92	45.030	ENSAPEG00000018931	tsen54	72	63.014	Amphiprion_percula
ENSLAFG00000011655	TSEN54	92	42.886	ENSATEG00000019860	tsen54	92	42.424	Anabas_testudineus
ENSLAFG00000011655	TSEN54	86	52.723	ENSAPLG00000009419	TSEN54	99	52.954	Anas_platyrhynchos
ENSLAFG00000011655	TSEN54	92	51.324	ENSACAG00000006714	TSEN54	93	51.004	Anolis_carolinensis
ENSLAFG00000011655	TSEN54	99	77.863	ENSANAG00000024061	TSEN54	99	77.358	Aotus_nancymaae
ENSLAFG00000011655	TSEN54	92	44.856	ENSACLG00000019800	tsen54	92	44.694	Astatotilapia_calliptera
ENSLAFG00000011655	TSEN54	100	78.343	ENSBTAG00000000824	TSEN54	100	78.343	Bos_taurus
ENSLAFG00000011655	TSEN54	99	76.908	ENSCJAG00000014278	TSEN54	99	76.415	Callithrix_jacchus
ENSLAFG00000011655	TSEN54	100	80.414	ENSCAFG00000004798	TSEN54	100	80.414	Canis_familiaris
ENSLAFG00000011655	TSEN54	100	80.414	ENSCAFG00020000312	TSEN54	100	80.414	Canis_lupus_dingo
ENSLAFG00000011655	TSEN54	100	77.024	ENSCHIG00000019908	TSEN54	100	76.836	Capra_hircus
ENSLAFG00000011655	TSEN54	86	79.085	ENSTSYG00000037439	TSEN54	100	79.085	Carlito_syrichta
ENSLAFG00000011655	TSEN54	99	77.290	ENSCCAG00000036624	TSEN54	99	76.792	Cebus_capucinus
ENSLAFG00000011655	TSEN54	97	77.563	ENSCATG00000042877	TSEN54	99	77.170	Cercocebus_atys
ENSLAFG00000011655	TSEN54	97	76.209	ENSCLAG00000002924	TSEN54	99	75.660	Chinchilla_lanigera
ENSLAFG00000011655	TSEN54	100	76.648	ENSCSAG00000004809	TSEN54	100	76.648	Chlorocebus_sabaeus
ENSLAFG00000011655	TSEN54	92	55.422	ENSCPBG00000028071	TSEN54	93	55.578	Chrysemys_picta_bellii
ENSLAFG00000011655	TSEN54	100	76.271	ENSCANG00000028053	TSEN54	100	76.271	Colobus_angolensis_palliatus
ENSLAFG00000011655	TSEN54	100	73.823	ENSCGRG00001020029	Tsen54	100	73.823	Cricetulus_griseus_chok1gshd
ENSLAFG00000011655	TSEN54	84	75.000	ENSCGRG00000016289	Tsen54	100	75.000	Cricetulus_griseus_crigri
ENSLAFG00000011655	TSEN54	80	39.529	ENSCSEG00000020586	tsen54	99	38.588	Cynoglossus_semilaevis
ENSLAFG00000011655	TSEN54	80	42.453	ENSDARG00000036844	tsen54	99	43.160	Danio_rerio
ENSLAFG00000011655	TSEN54	99	78.639	ENSDNOG00000018452	TSEN54	99	78.639	Dasypus_novemcinctus
ENSLAFG00000011655	TSEN54	100	74.765	ENSDORG00000004073	Tsen54	100	75.000	Dipodomys_ordii
ENSLAFG00000011655	TSEN54	92	35.686	ENSEBUG00000005203	TSEN54	91	35.306	Eptatretus_burgeri
ENSLAFG00000011655	TSEN54	100	80.226	ENSEASG00005000579	TSEN54	100	80.226	Equus_asinus_asinus
ENSLAFG00000011655	TSEN54	100	80.226	ENSECAG00000004924	TSEN54	100	80.226	Equus_caballus
ENSLAFG00000011655	TSEN54	86	78.993	ENSEEUG00000008467	TSEN54	100	78.993	Erinaceus_europaeus
ENSLAFG00000011655	TSEN54	92	44.400	ENSELUG00000017703	tsen54	86	43.164	Esox_lucius
ENSLAFG00000011655	TSEN54	100	81.168	ENSFCAG00000023712	TSEN54	100	81.168	Felis_catus
ENSLAFG00000011655	TSEN54	92	50.509	ENSFALG00000001119	TSEN54	92	50.509	Ficedula_albicollis
ENSLAFG00000011655	TSEN54	86	79.825	ENSFDAG00000019090	TSEN54	99	80.263	Fukomys_damarensis
ENSLAFG00000011655	TSEN54	92	46.584	ENSFHEG00000005470	tsen54	92	46.708	Fundulus_heteroclitus
ENSLAFG00000011655	TSEN54	81	40.856	ENSGMOG00000013146	tsen54	77	45.128	Gadus_morhua
ENSLAFG00000011655	TSEN54	93	49.008	ENSGALG00000047163	TSEN54	97	46.838	Gallus_gallus
ENSLAFG00000011655	TSEN54	92	46.830	ENSGAFG00000005111	tsen54	92	46.830	Gambusia_affinis
ENSLAFG00000011655	TSEN54	92	43.992	ENSGACG00000014987	tsen54	80	56.209	Gasterosteus_aculeatus
ENSLAFG00000011655	TSEN54	96	51.654	ENSGAGG00000006825	TSEN54	92	54.890	Gopherus_agassizii
ENSLAFG00000011655	TSEN54	93	79.555	ENSGGOG00000009417	TSEN54	96	79.555	Gorilla_gorilla
ENSLAFG00000011655	TSEN54	83	43.936	ENSHBUG00000018296	tsen54	99	37.500	Haplochromis_burtoni
ENSLAFG00000011655	TSEN54	100	76.648	ENSHGLG00000007979	TSEN54	100	76.648	Heterocephalus_glaber_female
ENSLAFG00000011655	TSEN54	100	75.706	ENSHGLG00100005497	TSEN54	100	75.706	Heterocephalus_glaber_male
ENSLAFG00000011655	TSEN54	80	41.784	ENSHCOG00000007481	tsen54	99	40.984	Hippocampus_comes
ENSLAFG00000011655	TSEN54	92	42.181	ENSIPUG00000000590	tsen54	75	67.939	Ictalurus_punctatus
ENSLAFG00000011655	TSEN54	100	73.396	ENSSTOG00000012883	TSEN54	100	73.396	Ictidomys_tridecemlineatus
ENSLAFG00000011655	TSEN54	100	73.734	ENSJJAG00000007365	Tsen54	100	73.546	Jaculus_jaculus
ENSLAFG00000011655	TSEN54	92	47.791	ENSKMAG00000006944	tsen54	92	46.906	Kryptolebias_marmoratus
ENSLAFG00000011655	TSEN54	92	43.522	ENSLBEG00000004199	tsen54	92	43.002	Labrus_bergylta
ENSLAFG00000011655	TSEN54	92	44.489	ENSLACG00000009497	TSEN54	95	44.223	Latimeria_chalumnae
ENSLAFG00000011655	TSEN54	92	47.059	ENSLOCG00000011191	tsen54	92	46.693	Lepisosteus_oculatus
ENSLAFG00000011655	TSEN54	100	76.836	ENSMFAG00000000712	TSEN54	100	76.836	Macaca_fascicularis
ENSLAFG00000011655	TSEN54	100	76.648	ENSMNEG00000029199	TSEN54	100	76.648	Macaca_nemestrina
ENSLAFG00000011655	TSEN54	86	79.431	ENSMLEG00000044168	TSEN54	88	79.431	Mandrillus_leucophaeus
ENSLAFG00000011655	TSEN54	92	43.513	ENSMAMG00000019773	tsen54	92	43.086	Mastacembelus_armatus
ENSLAFG00000011655	TSEN54	92	44.856	ENSMZEG00005000884	tsen54	92	44.694	Maylandia_zebra
ENSLAFG00000011655	TSEN54	97	48.679	ENSMGAG00000009556	TSEN54	92	49.900	Meleagris_gallopavo
ENSLAFG00000011655	TSEN54	100	74.765	ENSMAUG00000016838	Tsen54	100	74.765	Mesocricetus_auratus
ENSLAFG00000011655	TSEN54	100	77.799	ENSMICG00000044012	TSEN54	100	77.799	Microcebus_murinus
ENSLAFG00000011655	TSEN54	100	75.895	ENSMOCG00000021585	Tsen54	100	75.895	Microtus_ochrogaster
ENSLAFG00000011655	TSEN54	92	41.752	ENSMMOG00000020189	tsen54	81	65.672	Mola_mola
ENSLAFG00000011655	TSEN54	98	64.394	ENSMODG00000007438	TSEN54	98	63.993	Monodelphis_domestica
ENSLAFG00000011655	TSEN54	92	44.057	ENSMALG00000020573	tsen54	92	43.878	Monopterus_albus
ENSLAFG00000011655	TSEN54	99	73.724	MGP_CAROLIEiJ_G0017417	Tsen54	99	73.724	Mus_caroli
ENSLAFG00000011655	TSEN54	99	73.913	ENSMUSG00000020781	Tsen54	99	73.913	Mus_musculus
ENSLAFG00000011655	TSEN54	99	73.346	MGP_PahariEiJ_G0018547	Tsen54	99	73.346	Mus_pahari
ENSLAFG00000011655	TSEN54	99	73.913	MGP_SPRETEiJ_G0018262	Tsen54	99	73.913	Mus_spretus
ENSLAFG00000011655	TSEN54	100	79.473	ENSMPUG00000013870	TSEN54	100	79.473	Mustela_putorius_furo
ENSLAFG00000011655	TSEN54	99	78.095	ENSMLUG00000015298	TSEN54	99	77.905	Myotis_lucifugus
ENSLAFG00000011655	TSEN54	100	74.576	ENSNGAG00000015673	Tsen54	100	74.576	Nannospalax_galili
ENSLAFG00000011655	TSEN54	88	63.502	ENSMEUG00000011908	TSEN54	99	63.502	Notamacropus_eugenii
ENSLAFG00000011655	TSEN54	100	69.245	ENSOPRG00000012513	TSEN54	100	69.245	Ochotona_princeps
ENSLAFG00000011655	TSEN54	92	45.267	ENSONIG00000009543	tsen54	92	45.102	Oreochromis_niloticus
ENSLAFG00000011655	TSEN54	99	68.773	ENSOCUG00000009875	TSEN54	99	68.773	Oryctolagus_cuniculus
ENSLAFG00000011655	TSEN54	92	45.549	ENSORLG00000000852	tsen54	92	45.041	Oryzias_latipes
ENSLAFG00000011655	TSEN54	92	45.549	ENSORLG00020018221	tsen54	95	44.444	Oryzias_latipes_hni
ENSLAFG00000011655	TSEN54	92	45.473	ENSORLG00015009413	tsen54	93	43.802	Oryzias_latipes_hsok
ENSLAFG00000011655	TSEN54	92	45.963	ENSOMEG00000014402	tsen54	90	45.342	Oryzias_melastigma
ENSLAFG00000011655	TSEN54	100	71.940	ENSOGAG00000001442	TSEN54	100	71.940	Otolemur_garnettii
ENSLAFG00000011655	TSEN54	86	80.306	ENSOARG00000010361	TSEN54	100	80.306	Ovis_aries
ENSLAFG00000011655	TSEN54	93	78.947	ENSPPAG00000043519	TSEN54	98	78.947	Pan_paniscus
ENSLAFG00000011655	TSEN54	100	81.168	ENSPPRG00000009162	TSEN54	100	81.168	Panthera_pardus
ENSLAFG00000011655	TSEN54	86	82.932	ENSPTIG00000019312	TSEN54	96	82.932	Panthera_tigris_altaica
ENSLAFG00000011655	TSEN54	99	76.560	ENSPTRG00000009646	TSEN54	99	76.560	Pan_troglodytes
ENSLAFG00000011655	TSEN54	99	76.604	ENSPANG00000020133	TSEN54	99	76.604	Papio_anubis
ENSLAFG00000011655	TSEN54	92	44.316	ENSPKIG00000023018	tsen54	99	44.988	Paramormyrops_kingsleyae
ENSLAFG00000011655	TSEN54	80	52.414	ENSPSIG00000012807	TSEN54	99	52.414	Pelodiscus_sinensis
ENSLAFG00000011655	TSEN54	92	35.614	ENSPMGG00000019578	tsen54	80	58.268	Periophthalmus_magnuspinnatus
ENSLAFG00000011655	TSEN54	100	74.953	ENSPEMG00000014857	Tsen54	100	74.953	Peromyscus_maniculatus_bairdii
ENSLAFG00000011655	TSEN54	92	47.251	ENSPFOG00000022740	tsen54	92	47.251	Poecilia_formosa
ENSLAFG00000011655	TSEN54	92	47.336	ENSPLAG00000014847	tsen54	92	47.336	Poecilia_latipinna
ENSLAFG00000011655	TSEN54	92	47.131	ENSPMEG00000022876	tsen54	92	47.131	Poecilia_mexicana
ENSLAFG00000011655	TSEN54	92	46.598	ENSPREG00000013090	tsen54	92	45.380	Poecilia_reticulata
ENSLAFG00000011655	TSEN54	91	75.208	ENSPPYG00000008629	TSEN54	99	75.625	Pongo_abelii
ENSLAFG00000011655	TSEN54	95	74.800	ENSPCAG00000002093	TSEN54	99	74.800	Procavia_capensis
ENSLAFG00000011655	TSEN54	100	79.661	ENSPCOG00000027880	TSEN54	100	79.661	Propithecus_coquereli
ENSLAFG00000011655	TSEN54	100	80.603	ENSPVAG00000008446	TSEN54	100	80.603	Pteropus_vampyrus
ENSLAFG00000011655	TSEN54	92	45.473	ENSPNYG00000010217	tsen54	99	45.051	Pundamilia_nyererei
ENSLAFG00000011655	TSEN54	92	45.902	ENSPNAG00000003770	tsen54	92	45.935	Pygocentrus_nattereri
ENSLAFG00000011655	TSEN54	99	74.291	ENSRNOG00000004598	Tsen54	99	74.291	Rattus_norvegicus
ENSLAFG00000011655	TSEN54	100	76.648	ENSRBIG00000043040	TSEN54	100	76.648	Rhinopithecus_bieti
ENSLAFG00000011655	TSEN54	100	76.271	ENSRROG00000030797	TSEN54	100	76.271	Rhinopithecus_roxellana
ENSLAFG00000011655	TSEN54	99	73.396	ENSSBOG00000013543	TSEN54	99	73.396	Saimiri_boliviensis_boliviensis
ENSLAFG00000011655	TSEN54	99	63.977	ENSSHAG00000018127	TSEN54	91	66.265	Sarcophilus_harrisii
ENSLAFG00000011655	TSEN54	80	43.750	ENSSFOG00015004093	tsen54	55	48.276	Scleropages_formosus
ENSLAFG00000011655	TSEN54	92	43.487	ENSSMAG00000012449	tsen54	99	41.907	Scophthalmus_maximus
ENSLAFG00000011655	TSEN54	92	45.510	ENSSDUG00000021506	tsen54	92	43.673	Seriola_dumerili
ENSLAFG00000011655	TSEN54	92	45.102	ENSSLDG00000016303	tsen54	92	43.265	Seriola_lalandi_dorsalis
ENSLAFG00000011655	TSEN54	75	50.856	ENSSPUG00000008988	TSEN54	91	50.856	Sphenodon_punctatus
ENSLAFG00000011655	TSEN54	92	45.621	ENSSPAG00000008098	-	99	45.214	Stegastes_partitus
ENSLAFG00000011655	TSEN54	80	41.589	ENSSPAG00000008047	tsen54	77	63.514	Stegastes_partitus
ENSLAFG00000011655	TSEN54	100	81.168	ENSSSCG00000036852	TSEN54	100	81.168	Sus_scrofa
ENSLAFG00000011655	TSEN54	86	51.634	ENSTGUG00000008548	TSEN54	99	51.422	Taeniopygia_guttata
ENSLAFG00000011655	TSEN54	92	44.353	ENSTRUG00000004230	tsen54	72	65.068	Takifugu_rubripes
ENSLAFG00000011655	TSEN54	86	84.279	ENSTTRG00000015828	TSEN54	100	84.279	Tursiops_truncatus
ENSLAFG00000011655	TSEN54	81	83.256	ENSUAMG00000010045	TSEN54	100	83.256	Ursus_americanus
ENSLAFG00000011655	TSEN54	84	83.820	ENSUMAG00000008979	TSEN54	100	83.820	Ursus_maritimus
ENSLAFG00000011655	TSEN54	98	80.422	ENSVVUG00000011411	TSEN54	95	83.266	Vulpes_vulpes
ENSLAFG00000011655	TSEN54	92	49.190	ENSXETG00000012532	tsen54	89	73.958	Xenopus_tropicalis
ENSLAFG00000011655	TSEN54	92	43.210	ENSXCOG00000018245	tsen54	99	41.822	Xiphophorus_couchianus
ENSLAFG00000011655	TSEN54	92	47.228	ENSXMAG00000018818	tsen54	92	47.023	Xiphophorus_maculatus