EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000011806 (Gene tree)
Gene ID: -
Gene Symbol: SYNJ1
Alias: INPP5G|PARK20
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 85470 bases
Position: chrscaffold_13:23302886-23388355
Accession: 11503
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000021048	Exo_endo_phos	PF03372.23	5e-15	1	1
ENSLAFP00000018741	Exo_endo_phos	PF03372.23	5e-15	1	1
ENSLAFP00000026551	Exo_endo_phos	PF03372.23	5.7e-15	1	1
ENSLAFP00000009868	Exo_endo_phos	PF03372.23	6e-15	1	1
ENSLAFP00000021048	DUF1866	PF08952.11	8.7e-59	1	1
ENSLAFP00000018741	DUF1866	PF08952.11	8.7e-59	1	1
ENSLAFP00000026551	DUF1866	PF08952.11	8.9e-59	1	1
ENSLAFP00000009868	DUF1866	PF08952.11	1e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000031865	SYNJ1-203	4254	-	ENSLAFP00000018741	1417 (aa)	-	G3TT33
ENSLAFT00000026648	SYNJ1-202	4581	-	ENSLAFP00000026551	1526 (aa)	-	G3UFE3
ENSLAFT00000030415	SYNJ1-204	4248	-	ENSLAFP00000021048	1415 (aa)	-	G3TZP0
ENSLAFT00000011809	SYNJ1-201	4743	-	ENSLAFP00000009868	1581 (aa)	-	G3T879

Gene Model

Click here to download ENSLAFG00000011806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000011806's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000011806	SYNJ1	82	47.645	ENSLAFG00000011979	SYNJ2	70	54.920

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000011806	SYNJ1	99	90.076	ENSG00000159082	SYNJ1	100	97.191	Homo_sapiens
ENSLAFG00000011806	SYNJ1	77	72.720	ENSAPOG00000002809	synj1	96	69.340	Acanthochromis_polyacanthus
ENSLAFG00000011806	SYNJ1	99	90.127	ENSAMEG00000015028	SYNJ1	99	90.038	Ailuropoda_melanoleuca
ENSLAFG00000011806	SYNJ1	85	62.979	ENSACIG00000008857	synj1	94	66.719	Amphilophus_citrinellus
ENSLAFG00000011806	SYNJ1	90	61.414	ENSAOCG00000009835	synj1	96	67.341	Amphiprion_ocellaris
ENSLAFG00000011806	SYNJ1	69	75.159	ENSAPEG00000021010	synj1	98	63.735	Amphiprion_percula
ENSLAFG00000011806	SYNJ1	88	63.741	ENSATEG00000002306	synj1	98	62.094	Anabas_testudineus
ENSLAFG00000011806	SYNJ1	99	78.679	ENSAPLG00000011832	SYNJ1	100	77.715	Anas_platyrhynchos
ENSLAFG00000011806	SYNJ1	83	83.162	ENSACAG00000003006	-	99	83.641	Anolis_carolinensis
ENSLAFG00000011806	SYNJ1	99	89.450	ENSANAG00000027325	SYNJ1	99	93.640	Aotus_nancymaae
ENSLAFG00000011806	SYNJ1	81	69.775	ENSACLG00000002255	synj1	98	66.617	Astatotilapia_calliptera
ENSLAFG00000011806	SYNJ1	99	88.410	ENSBTAG00000003063	SYNJ1	99	93.450	Bos_taurus
ENSLAFG00000011806	SYNJ1	99	89.873	ENSCJAG00000009187	SYNJ1	99	93.563	Callithrix_jacchus
ENSLAFG00000011806	SYNJ1	99	89.530	ENSCAFG00000009041	SYNJ1	100	89.530	Canis_familiaris
ENSLAFG00000011806	SYNJ1	99	88.061	ENSCAFG00020025776	SYNJ1	99	88.805	Canis_lupus_dingo
ENSLAFG00000011806	SYNJ1	93	96.286	ENSCHIG00000005095	SYNJ1	100	86.505	Capra_hircus
ENSLAFG00000011806	SYNJ1	99	89.338	ENSTSYG00000014541	SYNJ1	99	92.797	Carlito_syrichta
ENSLAFG00000011806	SYNJ1	97	73.698	ENSCAPG00000014483	SYNJ1	97	78.158	Cavia_aperea
ENSLAFG00000011806	SYNJ1	99	88.038	ENSCPOG00000012182	SYNJ1	99	93.333	Cavia_porcellus
ENSLAFG00000011806	SYNJ1	99	85.180	ENSCCAG00000020825	SYNJ1	99	93.333	Cebus_capucinus
ENSLAFG00000011806	SYNJ1	99	89.653	ENSCATG00000033891	SYNJ1	99	93.563	Cercocebus_atys
ENSLAFG00000011806	SYNJ1	99	88.053	ENSCLAG00000009796	SYNJ1	100	96.006	Chinchilla_lanigera
ENSLAFG00000011806	SYNJ1	83	93.770	ENSCSAG00000009654	SYNJ1	99	94.483	Chlorocebus_sabaeus
ENSLAFG00000011806	SYNJ1	87	92.182	ENSCHOG00000012390	SYNJ1	87	92.182	Choloepus_hoffmanni
ENSLAFG00000011806	SYNJ1	79	87.379	ENSCPBG00000006402	SYNJ1	97	87.138	Chrysemys_picta_bellii
ENSLAFG00000011806	SYNJ1	99	89.842	ENSCANG00000031359	SYNJ1	99	93.640	Colobus_angolensis_palliatus
ENSLAFG00000011806	SYNJ1	100	84.306	ENSCGRG00001010861	Synj1	99	92.107	Cricetulus_griseus_chok1gshd
ENSLAFG00000011806	SYNJ1	83	91.325	ENSCGRG00000015749	Synj1	100	94.579	Cricetulus_griseus_crigri
ENSLAFG00000011806	SYNJ1	69	75.568	ENSCSEG00000019614	synj1	99	67.381	Cynoglossus_semilaevis
ENSLAFG00000011806	SYNJ1	69	73.797	ENSCVAG00000019250	synj1	97	65.976	Cyprinodon_variegatus
ENSLAFG00000011806	SYNJ1	69	77.596	ENSDARG00000025011	synj1	97	68.524	Danio_rerio
ENSLAFG00000011806	SYNJ1	100	84.467	ENSDNOG00000010732	SYNJ1	100	84.966	Dasypus_novemcinctus
ENSLAFG00000011806	SYNJ1	79	94.245	ENSETEG00000018674	SYNJ1	79	94.928	Echinops_telfairi
ENSLAFG00000011806	SYNJ1	99	88.608	ENSEASG00005006287	SYNJ1	98	94.179	Equus_asinus_asinus
ENSLAFG00000011806	SYNJ1	99	89.804	ENSECAG00000004829	SYNJ1	100	89.867	Equus_caballus
ENSLAFG00000011806	SYNJ1	92	95.503	ENSEEUG00000005150	SYNJ1	93	88.931	Erinaceus_europaeus
ENSLAFG00000011806	SYNJ1	90	60.042	ENSELUG00000009731	synj1	79	72.988	Esox_lucius
ENSLAFG00000011806	SYNJ1	99	87.270	ENSFCAG00000012498	SYNJ1	99	94.014	Felis_catus
ENSLAFG00000011806	SYNJ1	88	70.294	ENSFALG00000004680	SYNJ1	100	69.384	Ficedula_albicollis
ENSLAFG00000011806	SYNJ1	83	93.297	ENSFDAG00000016818	SYNJ1	100	95.863	Fukomys_damarensis
ENSLAFG00000011806	SYNJ1	69	75.453	ENSFHEG00000017689	synj1	97	59.138	Fundulus_heteroclitus
ENSLAFG00000011806	SYNJ1	63	72.592	ENSGMOG00000014852	synj1	77	72.326	Gadus_morhua
ENSLAFG00000011806	SYNJ1	100	74.377	ENSGALG00000034317	SYNJ1	100	74.655	Gallus_gallus
ENSLAFG00000011806	SYNJ1	69	74.208	ENSGAFG00000019466	synj1	96	59.133	Gambusia_affinis
ENSLAFG00000011806	SYNJ1	68	70.765	ENSGACG00000020575	synj1	81	72.165	Gasterosteus_aculeatus
ENSLAFG00000011806	SYNJ1	99	77.826	ENSGAGG00000022523	SYNJ1	100	84.760	Gopherus_agassizii
ENSLAFG00000011806	SYNJ1	99	89.823	ENSGGOG00000015945	SYNJ1	99	93.487	Gorilla_gorilla
ENSLAFG00000011806	SYNJ1	82	67.780	ENSHBUG00000007774	synj1	98	66.617	Haplochromis_burtoni
ENSLAFG00000011806	SYNJ1	99	88.671	ENSHGLG00000006420	SYNJ1	100	96.148	Heterocephalus_glaber_female
ENSLAFG00000011806	SYNJ1	99	88.622	ENSHGLG00100012591	SYNJ1	100	96.148	Heterocephalus_glaber_male
ENSLAFG00000011806	SYNJ1	83	60.343	ENSHCOG00000012774	synj1	83	72.991	Hippocampus_comes
ENSLAFG00000011806	SYNJ1	88	64.921	ENSIPUG00000010691	SYNJ1	94	64.286	Ictalurus_punctatus
ENSLAFG00000011806	SYNJ1	97	90.285	ENSSTOG00000015806	SYNJ1	99	94.866	Ictidomys_tridecemlineatus
ENSLAFG00000011806	SYNJ1	100	86.084	ENSJJAG00000020168	Synj1	100	82.754	Jaculus_jaculus
ENSLAFG00000011806	SYNJ1	69	74.842	ENSKMAG00000004221	synj1	87	76.447	Kryptolebias_marmoratus
ENSLAFG00000011806	SYNJ1	70	73.209	ENSLBEG00000015081	synj1	97	64.562	Labrus_bergylta
ENSLAFG00000011806	SYNJ1	98	68.215	ENSLACG00000005928	SYNJ1	98	69.434	Latimeria_chalumnae
ENSLAFG00000011806	SYNJ1	95	69.638	ENSLOCG00000009230	synj1	100	69.241	Lepisosteus_oculatus
ENSLAFG00000011806	SYNJ1	100	88.365	ENSMFAG00000018883	SYNJ1	99	93.647	Macaca_fascicularis
ENSLAFG00000011806	SYNJ1	99	89.570	ENSMMUG00000004624	SYNJ1	99	94.343	Macaca_mulatta
ENSLAFG00000011806	SYNJ1	99	89.583	ENSMNEG00000040077	SYNJ1	94	94.584	Macaca_nemestrina
ENSLAFG00000011806	SYNJ1	99	89.653	ENSMLEG00000037029	SYNJ1	99	93.640	Mandrillus_leucophaeus
ENSLAFG00000011806	SYNJ1	85	64.571	ENSMAMG00000013404	synj1	88	62.094	Mastacembelus_armatus
ENSLAFG00000011806	SYNJ1	69	75.295	ENSMZEG00005024358	synj1	98	66.617	Maylandia_zebra
ENSLAFG00000011806	SYNJ1	100	77.153	ENSMGAG00000014522	SYNJ1	98	77.942	Meleagris_gallopavo
ENSLAFG00000011806	SYNJ1	83	91.325	ENSMAUG00000009743	Synj1	100	94.294	Mesocricetus_auratus
ENSLAFG00000011806	SYNJ1	99	88.952	ENSMICG00000034953	SYNJ1	99	93.482	Microcebus_murinus
ENSLAFG00000011806	SYNJ1	72	72.931	ENSMMOG00000010203	synj1	84	76.520	Mola_mola
ENSLAFG00000011806	SYNJ1	82	80.507	ENSMODG00000021073	SYNJ1	99	80.168	Monodelphis_domestica
ENSLAFG00000011806	SYNJ1	85	66.811	ENSMALG00000014015	synj1	98	61.282	Monopterus_albus
ENSLAFG00000011806	SYNJ1	99	86.481	MGP_CAROLIEiJ_G0020951	Synj1	100	95.292	Mus_caroli
ENSLAFG00000011806	SYNJ1	99	86.545	ENSMUSG00000022973	Synj1	100	95.578	Mus_musculus
ENSLAFG00000011806	SYNJ1	99	86.481	MGP_PahariEiJ_G0016656	Synj1	100	95.578	Mus_pahari
ENSLAFG00000011806	SYNJ1	99	86.608	MGP_SPRETEiJ_G0021857	Synj1	100	95.578	Mus_spretus
ENSLAFG00000011806	SYNJ1	99	89.324	ENSMPUG00000001153	SYNJ1	100	89.135	Mustela_putorius_furo
ENSLAFG00000011806	SYNJ1	73	75.024	ENSMLUG00000005764	-	100	74.815	Myotis_lucifugus
ENSLAFG00000011806	SYNJ1	82	93.726	ENSNGAG00000000453	Synj1	100	95.435	Nannospalax_galili
ENSLAFG00000011806	SYNJ1	69	71.312	ENSNBRG00000011936	synj1	96	58.767	Neolamprologus_brichardi
ENSLAFG00000011806	SYNJ1	93	84.401	ENSNLEG00000003734	SYNJ1	98	89.176	Nomascus_leucogenys
ENSLAFG00000011806	SYNJ1	76	87.500	ENSMEUG00000004158	-	69	87.500	Notamacropus_eugenii
ENSLAFG00000011806	SYNJ1	93	92.583	ENSOPRG00000013602	SYNJ1	93	93.049	Ochotona_princeps
ENSLAFG00000011806	SYNJ1	90	65.567	ENSONIG00000004667	synj1	100	67.132	Oreochromis_niloticus
ENSLAFG00000011806	SYNJ1	96	77.755	ENSOANG00000006929	SYNJ1	97	76.621	Ornithorhynchus_anatinus
ENSLAFG00000011806	SYNJ1	99	85.615	ENSOCUG00000001420	SYNJ1	100	85.470	Oryctolagus_cuniculus
ENSLAFG00000011806	SYNJ1	69	75.570	ENSORLG00000004320	synj1	92	68.331	Oryzias_latipes
ENSLAFG00000011806	SYNJ1	69	73.617	ENSORLG00020011994	synj1	79	74.695	Oryzias_latipes_hni
ENSLAFG00000011806	SYNJ1	69	75.455	ENSORLG00015018077	synj1	95	58.267	Oryzias_latipes_hsok
ENSLAFG00000011806	SYNJ1	69	75.273	ENSOMEG00000014322	synj1	96	66.339	Oryzias_melastigma
ENSLAFG00000011806	SYNJ1	99	85.849	ENSOGAG00000006010	SYNJ1	98	86.038	Otolemur_garnettii
ENSLAFG00000011806	SYNJ1	100	86.606	ENSOARG00000013414	SYNJ1	98	88.068	Ovis_aries
ENSLAFG00000011806	SYNJ1	99	89.949	ENSPPAG00000026784	SYNJ1	99	93.793	Pan_paniscus
ENSLAFG00000011806	SYNJ1	99	90.208	ENSPPRG00000023469	SYNJ1	99	94.167	Panthera_pardus
ENSLAFG00000011806	SYNJ1	99	90.284	ENSPTIG00000007930	SYNJ1	99	94.091	Panthera_tigris_altaica
ENSLAFG00000011806	SYNJ1	99	90.013	ENSPTRG00000023787	SYNJ1	99	93.793	Pan_troglodytes
ENSLAFG00000011806	SYNJ1	99	87.350	ENSPTRG00000048135	-	99	90.054	Pan_troglodytes
ENSLAFG00000011806	SYNJ1	99	89.721	ENSPANG00000022531	SYNJ1	99	94.636	Papio_anubis
ENSLAFG00000011806	SYNJ1	74	76.805	ENSPKIG00000022603	synj1	95	74.855	Paramormyrops_kingsleyae
ENSLAFG00000011806	SYNJ1	69	75.227	ENSPMGG00000016831	synj1	76	75.229	Periophthalmus_magnuspinnatus
ENSLAFG00000011806	SYNJ1	83	92.035	ENSPEMG00000018767	Synj1	100	94.864	Peromyscus_maniculatus_bairdii
ENSLAFG00000011806	SYNJ1	65	61.041	ENSPMAG00000002887	synj1	78	61.041	Petromyzon_marinus
ENSLAFG00000011806	SYNJ1	99	79.138	ENSPCIG00000016372	SYNJ1	99	86.794	Phascolarctos_cinereus
ENSLAFG00000011806	SYNJ1	69	75.931	ENSPFOG00000016886	synj1	99	64.415	Poecilia_formosa
ENSLAFG00000011806	SYNJ1	69	74.842	ENSPLAG00000017559	synj1	96	65.311	Poecilia_latipinna
ENSLAFG00000011806	SYNJ1	69	74.955	ENSPMEG00000007643	synj1	96	62.711	Poecilia_mexicana
ENSLAFG00000011806	SYNJ1	69	75.843	ENSPREG00000012412	synj1	97	66.767	Poecilia_reticulata
ENSLAFG00000011806	SYNJ1	84	93.661	ENSPPYG00000011365	SYNJ1	97	93.432	Pongo_abelii
ENSLAFG00000011806	SYNJ1	88	95.714	ENSPCAG00000009906	SYNJ1	89	95.714	Procavia_capensis
ENSLAFG00000011806	SYNJ1	93	91.422	ENSPCOG00000024841	SYNJ1	96	91.463	Propithecus_coquereli
ENSLAFG00000011806	SYNJ1	99	85.596	ENSPVAG00000000892	SYNJ1	100	85.596	Pteropus_vampyrus
ENSLAFG00000011806	SYNJ1	68	74.908	ENSPNYG00000022989	synj1	97	65.945	Pundamilia_nyererei
ENSLAFG00000011806	SYNJ1	69	77.269	ENSPNAG00000021119	synj1	87	77.830	Pygocentrus_nattereri
ENSLAFG00000011806	SYNJ1	100	85.668	ENSRNOG00000002051	Synj1	99	92.508	Rattus_norvegicus
ENSLAFG00000011806	SYNJ1	99	89.716	ENSRBIG00000034477	SYNJ1	99	93.563	Rhinopithecus_bieti
ENSLAFG00000011806	SYNJ1	99	89.842	ENSRROG00000039256	SYNJ1	99	93.716	Rhinopithecus_roxellana
ENSLAFG00000011806	SYNJ1	99	89.340	ENSSBOG00000021001	SYNJ1	99	93.410	Saimiri_boliviensis_boliviensis
ENSLAFG00000011806	SYNJ1	98	78.476	ENSSHAG00000008538	SYNJ1	97	78.845	Sarcophilus_harrisii
ENSLAFG00000011806	SYNJ1	95	64.381	ENSSFOG00015006095	synj1	95	62.659	Scleropages_formosus
ENSLAFG00000011806	SYNJ1	83	64.830	ENSSMAG00000018066	synj1	94	65.195	Scophthalmus_maximus
ENSLAFG00000011806	SYNJ1	70	75.067	ENSSDUG00000013058	synj1	96	62.309	Seriola_dumerili
ENSLAFG00000011806	SYNJ1	69	75.996	ENSSLDG00000021406	synj1	96	67.498	Seriola_lalandi_dorsalis
ENSLAFG00000011806	SYNJ1	71	95.880	ENSSARG00000009490	SYNJ1	75	96.241	Sorex_araneus
ENSLAFG00000011806	SYNJ1	96	75.305	ENSSPUG00000012552	SYNJ1	98	75.241	Sphenodon_punctatus
ENSLAFG00000011806	SYNJ1	67	74.153	ENSSPAG00000006812	SYNJ1	95	60.967	Stegastes_partitus
ENSLAFG00000011806	SYNJ1	94	58.731	ENSSPAG00000017029	synj1	92	65.637	Stegastes_partitus
ENSLAFG00000011806	SYNJ1	99	82.899	ENSSSCG00000012035	SYNJ1	99	93.145	Sus_scrofa
ENSLAFG00000011806	SYNJ1	99	77.233	ENSTGUG00000013445	SYNJ1	97	77.569	Taeniopygia_guttata
ENSLAFG00000011806	SYNJ1	71	72.735	ENSTRUG00000006907	synj1	98	59.987	Takifugu_rubripes
ENSLAFG00000011806	SYNJ1	88	64.780	ENSTNIG00000009940	synj1	99	65.616	Tetraodon_nigroviridis
ENSLAFG00000011806	SYNJ1	88	97.101	ENSTBEG00000016298	SYNJ1	86	97.101	Tupaia_belangeri
ENSLAFG00000011806	SYNJ1	99	81.349	ENSTTRG00000002222	SYNJ1	100	81.158	Tursiops_truncatus
ENSLAFG00000011806	SYNJ1	99	87.840	ENSUAMG00000018606	SYNJ1	99	96.466	Ursus_americanus
ENSLAFG00000011806	SYNJ1	99	86.954	ENSUMAG00000018419	SYNJ1	99	96.466	Ursus_maritimus
ENSLAFG00000011806	SYNJ1	92	96.963	ENSVPAG00000001241	SYNJ1	87	98.571	Vicugna_pacos
ENSLAFG00000011806	SYNJ1	99	89.234	ENSVVUG00000023125	SYNJ1	99	94.713	Vulpes_vulpes
ENSLAFG00000011806	SYNJ1	100	69.535	ENSXETG00000009899	synj1	95	70.784	Xenopus_tropicalis
ENSLAFG00000011806	SYNJ1	69	75.818	ENSXCOG00000011896	synj1	96	67.670	Xiphophorus_couchianus
ENSLAFG00000011806	SYNJ1	69	76.117	ENSXMAG00000017524	synj1	96	67.500	Xiphophorus_maculatus