EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000011979 (Gene tree)
Gene ID: -
Gene Symbol: SYNJ2
Alias: INPP5H
Full Name: synaptojanin 2
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 92913 bases
Position: chrscaffold_69:833784-926696
Accession: 11504
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000010017	Exo_endo_phos	PF03372.23	6.7e-12	1	1
ENSLAFP00000018275	Exo_endo_phos	PF03372.23	7.4e-12	1	1
ENSLAFP00000021708	Exo_endo_phos	PF03372.23	7.9e-12	1	1
ENSLAFP00000018275	DUF1866	PF08952.11	1e-58	1	1
ENSLAFP00000021708	DUF1866	PF08952.11	1.1e-58	1	1
ENSLAFP00000010017	DUF1866	PF08952.11	1.1e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000011987	SYNJ2-201	4401	-	ENSLAFP00000010017	1467 (aa)	-	G3T8J5
ENSLAFT00000032961	SYNJ2-203	4188	-	ENSLAFP00000018275	1396 (aa)	-	G3TRR7
ENSLAFT00000026495	SYNJ2-202	4215	-	ENSLAFP00000021708	1405 (aa)	-	G3U1K0

Gene Model

Click here to download ENSLAFG00000011979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000011979's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000011979	SYNJ2	70	54.920	ENSLAFG00000011806	SYNJ1	82	47.645

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000011979	SYNJ2	100	83.515	ENSG00000078269	SYNJ2	99	82.626	Homo_sapiens
ENSLAFG00000011979	SYNJ2	100	79.209	ENSAMEG00000009581	SYNJ2	99	78.937	Ailuropoda_melanoleuca
ENSLAFG00000011979	SYNJ2	99	69.980	ENSAPLG00000002563	SYNJ2	96	69.913	Anas_platyrhynchos
ENSLAFG00000011979	SYNJ2	91	71.123	ENSACAG00000004945	SYNJ2	91	69.160	Anolis_carolinensis
ENSLAFG00000011979	SYNJ2	100	84.637	ENSANAG00000026575	SYNJ2	99	84.637	Aotus_nancymaae
ENSLAFG00000011979	SYNJ2	99	81.068	ENSBTAG00000000817	SYNJ2	97	81.112	Bos_taurus
ENSLAFG00000011979	SYNJ2	100	83.845	ENSCJAG00000003570	SYNJ2	94	87.899	Callithrix_jacchus
ENSLAFG00000011979	SYNJ2	100	81.497	ENSCAFG00000000644	SYNJ2	99	81.701	Canis_familiaris
ENSLAFG00000011979	SYNJ2	100	82.202	ENSCAFG00020015809	SYNJ2	98	85.396	Canis_lupus_dingo
ENSLAFG00000011979	SYNJ2	100	80.901	ENSCHIG00000011077	SYNJ2	97	81.201	Capra_hircus
ENSLAFG00000011979	SYNJ2	99	83.640	ENSTSYG00000014342	SYNJ2	94	88.216	Carlito_syrichta
ENSLAFG00000011979	SYNJ2	99	80.643	ENSCAPG00000000287	SYNJ2	95	87.231	Cavia_aperea
ENSLAFG00000011979	SYNJ2	100	82.773	ENSCPOG00000009144	SYNJ2	95	90.013	Cavia_porcellus
ENSLAFG00000011979	SYNJ2	100	84.566	ENSCCAG00000025484	SYNJ2	94	87.572	Cebus_capucinus
ENSLAFG00000011979	SYNJ2	100	84.196	ENSCATG00000042943	SYNJ2	99	83.150	Cercocebus_atys
ENSLAFG00000011979	SYNJ2	100	82.970	ENSCLAG00000004730	SYNJ2	93	88.641	Chinchilla_lanigera
ENSLAFG00000011979	SYNJ2	100	84.128	ENSCSAG00000013130	SYNJ2	97	84.128	Chlorocebus_sabaeus
ENSLAFG00000011979	SYNJ2	99	71.284	ENSCPBG00000016273	SYNJ2	96	71.400	Chrysemys_picta_bellii
ENSLAFG00000011979	SYNJ2	100	84.060	ENSCANG00000040349	SYNJ2	96	87.663	Colobus_angolensis_palliatus
ENSLAFG00000011979	SYNJ2	99	82.496	ENSCGRG00001004257	Synj2	97	89.607	Cricetulus_griseus_chok1gshd
ENSLAFG00000011979	SYNJ2	99	82.471	ENSCGRG00000001656	Synj2	97	89.607	Cricetulus_griseus_crigri
ENSLAFG00000011979	SYNJ2	100	73.043	ENSDNOG00000015900	SYNJ2	96	82.805	Dasypus_novemcinctus
ENSLAFG00000011979	SYNJ2	100	79.516	ENSDORG00000014128	Synj2	97	78.736	Dipodomys_ordii
ENSLAFG00000011979	SYNJ2	84	92.935	ENSETEG00000017418	SYNJ2	81	92.935	Echinops_telfairi
ENSLAFG00000011979	SYNJ2	100	84.037	ENSEASG00005018902	SYNJ2	97	84.324	Equus_asinus_asinus
ENSLAFG00000011979	SYNJ2	100	83.106	ENSECAG00000012646	SYNJ2	91	83.379	Equus_caballus
ENSLAFG00000011979	SYNJ2	56	78.947	ENSEEUG00000015796	-	57	78.947	Erinaceus_europaeus
ENSLAFG00000011979	SYNJ2	100	82.307	ENSFCAG00000010854	SYNJ2	94	86.754	Felis_catus
ENSLAFG00000011979	SYNJ2	99	67.325	ENSFALG00000012593	SYNJ2	98	67.733	Ficedula_albicollis
ENSLAFG00000011979	SYNJ2	99	82.568	ENSFDAG00000016352	SYNJ2	97	88.790	Fukomys_damarensis
ENSLAFG00000011979	SYNJ2	99	68.966	ENSGALG00000013727	SYNJ2	96	69.080	Gallus_gallus
ENSLAFG00000011979	SYNJ2	99	70.892	ENSGAGG00000009857	SYNJ2	96	70.959	Gopherus_agassizii
ENSLAFG00000011979	SYNJ2	100	83.651	ENSGGOG00000012210	SYNJ2	94	87.500	Gorilla_gorilla
ENSLAFG00000011979	SYNJ2	100	82.890	ENSHGLG00000007534	SYNJ2	95	89.633	Heterocephalus_glaber_female
ENSLAFG00000011979	SYNJ2	99	83.859	ENSHGLG00100009973	SYNJ2	95	89.633	Heterocephalus_glaber_male
ENSLAFG00000011979	SYNJ2	100	82.836	ENSSTOG00000016474	SYNJ2	99	82.972	Ictidomys_tridecemlineatus
ENSLAFG00000011979	SYNJ2	99	81.048	ENSJJAG00000014436	Synj2	96	83.627	Jaculus_jaculus
ENSLAFG00000011979	SYNJ2	69	72.587	ENSLACG00000007316	SYNJ2	99	68.236	Latimeria_chalumnae
ENSLAFG00000011979	SYNJ2	93	90.280	ENSMFAG00000040552	SYNJ2	96	90.280	Macaca_fascicularis
ENSLAFG00000011979	SYNJ2	70	87.524	ENSMMUG00000007153	SYNJ2	96	87.524	Macaca_mulatta
ENSLAFG00000011979	SYNJ2	100	84.264	ENSMNEG00000017211	SYNJ2	99	84.023	Macaca_nemestrina
ENSLAFG00000011979	SYNJ2	100	81.063	ENSMLEG00000024911	SYNJ2	97	81.063	Mandrillus_leucophaeus
ENSLAFG00000011979	SYNJ2	92	73.147	ENSMGAG00000012839	SYNJ2	99	73.001	Meleagris_gallopavo
ENSLAFG00000011979	SYNJ2	99	81.864	ENSMAUG00000022212	Synj2	96	89.480	Mesocricetus_auratus
ENSLAFG00000011979	SYNJ2	100	82.018	ENSMICG00000015804	SYNJ2	99	80.455	Microcebus_murinus
ENSLAFG00000011979	SYNJ2	99	81.434	ENSMOCG00000020054	Synj2	99	88.265	Microtus_ochrogaster
ENSLAFG00000011979	SYNJ2	99	79.715	ENSMODG00000007783	SYNJ2	97	79.715	Monodelphis_domestica
ENSLAFG00000011979	SYNJ2	99	80.387	MGP_CAROLIEiJ_G0021026	Synj2	100	89.259	Mus_caroli
ENSLAFG00000011979	SYNJ2	99	80.243	ENSMUSG00000023805	Synj2	100	89.259	Mus_musculus
ENSLAFG00000011979	SYNJ2	99	80.258	MGP_PahariEiJ_G0023344	Synj2	100	89.107	Mus_pahari
ENSLAFG00000011979	SYNJ2	99	80.029	MGP_SPRETEiJ_G0021931	Synj2	100	88.956	Mus_spretus
ENSLAFG00000011979	SYNJ2	87	83.125	ENSMPUG00000005323	SYNJ2	95	82.815	Mustela_putorius_furo
ENSLAFG00000011979	SYNJ2	98	79.207	ENSMLUG00000000324	SYNJ2	99	78.999	Myotis_lucifugus
ENSLAFG00000011979	SYNJ2	99	83.357	ENSNGAG00000014859	Synj2	98	89.776	Nannospalax_galili
ENSLAFG00000011979	SYNJ2	99	81.373	ENSNLEG00000010750	SYNJ2	94	85.086	Nomascus_leucogenys
ENSLAFG00000011979	SYNJ2	95	85.961	ENSMEUG00000003493	SYNJ2	94	85.961	Notamacropus_eugenii
ENSLAFG00000011979	SYNJ2	93	78.133	ENSOPRG00000009648	SYNJ2	90	78.133	Ochotona_princeps
ENSLAFG00000011979	SYNJ2	100	83.608	ENSODEG00000007709	SYNJ2	94	90.870	Octodon_degus
ENSLAFG00000011979	SYNJ2	99	80.204	ENSOCUG00000004762	SYNJ2	99	80.204	Oryctolagus_cuniculus
ENSLAFG00000011979	SYNJ2	79	85.385	ENSOGAG00000000488	SYNJ2	99	86.500	Otolemur_garnettii
ENSLAFG00000011979	SYNJ2	100	79.268	ENSOARG00000004304	SYNJ2	99	79.538	Ovis_aries
ENSLAFG00000011979	SYNJ2	100	83.549	ENSPPAG00000028831	SYNJ2	97	83.413	Pan_paniscus
ENSLAFG00000011979	SYNJ2	100	81.459	ENSPPRG00000009068	SYNJ2	94	86.590	Panthera_pardus
ENSLAFG00000011979	SYNJ2	99	81.173	ENSPTIG00000018780	SYNJ2	94	86.416	Panthera_tigris_altaica
ENSLAFG00000011979	SYNJ2	100	84.780	ENSPTRG00000018739	SYNJ2	96	87.663	Pan_troglodytes
ENSLAFG00000011979	SYNJ2	100	84.922	ENSPANG00000010755	SYNJ2	94	88.072	Papio_anubis
ENSLAFG00000011979	SYNJ2	98	71.380	ENSPSIG00000014659	SYNJ2	97	71.243	Pelodiscus_sinensis
ENSLAFG00000011979	SYNJ2	99	81.011	ENSPEMG00000006247	Synj2	96	86.041	Peromyscus_maniculatus_bairdii
ENSLAFG00000011979	SYNJ2	100	79.878	ENSPCIG00000010179	SYNJ2	99	79.511	Phascolarctos_cinereus
ENSLAFG00000011979	SYNJ2	100	83.787	ENSPPYG00000017130	SYNJ2	97	83.787	Pongo_abelii
ENSLAFG00000011979	SYNJ2	90	93.548	ENSPCAG00000009217	SYNJ2	86	93.548	Procavia_capensis
ENSLAFG00000011979	SYNJ2	100	83.322	ENSPCOG00000026910	SYNJ2	94	87.817	Propithecus_coquereli
ENSLAFG00000011979	SYNJ2	100	78.474	ENSPVAG00000006131	SYNJ2	97	78.216	Pteropus_vampyrus
ENSLAFG00000011979	SYNJ2	99	79.510	ENSRNOG00000017114	Synj2	97	85.890	Rattus_norvegicus
ENSLAFG00000011979	SYNJ2	100	81.880	ENSRBIG00000044126	SYNJ2	97	81.880	Rhinopithecus_bieti
ENSLAFG00000011979	SYNJ2	100	84.332	ENSRROG00000027755	SYNJ2	94	87.990	Rhinopithecus_roxellana
ENSLAFG00000011979	SYNJ2	100	83.504	ENSSBOG00000034876	SYNJ2	99	82.637	Saimiri_boliviensis_boliviensis
ENSLAFG00000011979	SYNJ2	100	79.864	ENSSHAG00000018881	SYNJ2	99	79.593	Sarcophilus_harrisii
ENSLAFG00000011979	SYNJ2	91	73.059	ENSSPUG00000000491	SYNJ2	95	70.529	Sphenodon_punctatus
ENSLAFG00000011979	SYNJ2	87	85.345	ENSSSCG00000012315	SYNJ2	94	86.836	Sus_scrofa
ENSLAFG00000011979	SYNJ2	90	72.447	ENSTGUG00000011082	SYNJ2	98	72.918	Taeniopygia_guttata
ENSLAFG00000011979	SYNJ2	84	76.647	ENSTBEG00000015827	SYNJ2	84	76.647	Tupaia_belangeri
ENSLAFG00000011979	SYNJ2	100	77.641	ENSTTRG00000009677	SYNJ2	97	77.641	Tursiops_truncatus
ENSLAFG00000011979	SYNJ2	54	74.460	ENSUAMG00000021958	-	97	75.349	Ursus_americanus
ENSLAFG00000011979	SYNJ2	69	84.535	ENSUMAG00000012826	SYNJ2	96	84.696	Ursus_maritimus
ENSLAFG00000011979	SYNJ2	82	87.016	ENSVVUG00000007407	SYNJ2	99	85.208	Vulpes_vulpes
ENSLAFG00000011979	SYNJ2	91	65.105	ENSXETG00000034066	synj2	80	73.529	Xenopus_tropicalis