EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000011998 (Gene tree)
Gene ID: -
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 13696 bases
Position: chrscaffold_18:43420847-43434542
Accession: 100661717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000018841	RRM_1	PF00076.22	4.4e-38	1	3
ENSLAFP00000018841	RRM_1	PF00076.22	4.4e-38	2	3
ENSLAFP00000018841	RRM_1	PF00076.22	4.4e-38	3	3
ENSLAFP00000010025	RRM_1	PF00076.22	5e-38	1	3
ENSLAFP00000010025	RRM_1	PF00076.22	5e-38	2	3
ENSLAFP00000010025	RRM_1	PF00076.22	5e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000011997	RBM47-202	1779	-	ENSLAFP00000010025	593 (aa)	XP_023405597	G3T8K1
ENSLAFT00000031914	RBM47-201	1710	-	ENSLAFP00000018841	569 (aa)	-	G3TTD3

Gene Model

Click here to download ENSLAFG00000011998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000011998's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000011998	RBM47	56	71.160	ENSLAFG00000015448	RBM46	68	71.160
ENSLAFG00000011998	RBM47	83	54.403	ENSLAFG00000015462	A1CF	92	50.628
ENSLAFG00000011998	RBM47	57	55.046	ENSLAFG00000012793	HNRNPR	71	45.701
ENSLAFG00000011998	RBM47	55	54.747	ENSLAFG00000018172	SYNCRIP	79	46.517

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000011998	RBM47	100	94.454	ENSG00000163694	RBM47	100	97.235	Homo_sapiens
ENSLAFG00000011998	RBM47	100	77.796	ENSAPOG00000011062	rbm47	100	78.772	Acanthochromis_polyacanthus
ENSLAFG00000011998	RBM47	100	93.467	ENSAMEG00000009672	RBM47	100	94.807	Ailuropoda_melanoleuca
ENSLAFG00000011998	RBM47	100	76.962	ENSACIG00000011531	rbm47	100	76.461	Amphilophus_citrinellus
ENSLAFG00000011998	RBM47	100	77.926	ENSAOCG00000022245	rbm47	100	78.772	Amphiprion_ocellaris
ENSLAFG00000011998	RBM47	100	77.759	ENSAPEG00000018304	rbm47	100	78.772	Amphiprion_percula
ENSLAFG00000011998	RBM47	100	76.634	ENSATEG00000018400	rbm47	100	74.959	Anabas_testudineus
ENSLAFG00000011998	RBM47	100	86.745	ENSAPLG00000013974	RBM47	100	87.248	Anas_platyrhynchos
ENSLAFG00000011998	RBM47	100	85.643	ENSACAG00000011833	RBM47	100	85.810	Anolis_carolinensis
ENSLAFG00000011998	RBM47	100	94.790	ENSANAG00000029440	RBM47	100	94.454	Aotus_nancymaae
ENSLAFG00000011998	RBM47	100	76.393	ENSACLG00000016902	rbm47	100	80.103	Astatotilapia_calliptera
ENSLAFG00000011998	RBM47	100	75.327	ENSAMXG00000021794	rbm47	100	75.000	Astyanax_mexicanus
ENSLAFG00000011998	RBM47	100	95.798	ENSBTAG00000002356	RBM47	100	95.798	Bos_taurus
ENSLAFG00000011998	RBM47	100	94.631	ENSCJAG00000019385	RBM47	100	94.631	Callithrix_jacchus
ENSLAFG00000011998	RBM47	96	93.182	ENSCAFG00000015898	RBM47	100	92.450	Canis_familiaris
ENSLAFG00000011998	RBM47	83	94.512	ENSCAFG00020010558	RBM47	94	93.369	Canis_lupus_dingo
ENSLAFG00000011998	RBM47	100	96.134	ENSCHIG00000026214	RBM47	100	96.134	Capra_hircus
ENSLAFG00000011998	RBM47	86	79.216	ENSTSYG00000033612	RBM47	92	89.381	Carlito_syrichta
ENSLAFG00000011998	RBM47	100	86.555	ENSCAPG00000008426	RBM47	100	90.728	Cavia_aperea
ENSLAFG00000011998	RBM47	100	92.941	ENSCPOG00000014100	RBM47	100	95.467	Cavia_porcellus
ENSLAFG00000011998	RBM47	99	64.322	ENSCCAG00000024397	-	99	64.605	Cebus_capucinus
ENSLAFG00000011998	RBM47	100	94.799	ENSCCAG00000030129	-	100	94.463	Cebus_capucinus
ENSLAFG00000011998	RBM47	100	94.622	ENSCATG00000042064	RBM47	100	96.800	Cercocebus_atys
ENSLAFG00000011998	RBM47	100	92.941	ENSCLAG00000001684	RBM47	100	94.286	Chinchilla_lanigera
ENSLAFG00000011998	RBM47	100	94.622	ENSCSAG00000017060	RBM47	100	94.790	Chlorocebus_sabaeus
ENSLAFG00000011998	RBM47	90	91.250	ENSCHOG00000011731	RBM47	88	90.337	Choloepus_hoffmanni
ENSLAFG00000011998	RBM47	100	89.816	ENSCPBG00000013831	RBM47	100	89.983	Chrysemys_picta_bellii
ENSLAFG00000011998	RBM47	100	94.790	ENSCANG00000019997	RBM47	100	96.800	Colobus_angolensis_palliatus
ENSLAFG00000011998	RBM47	100	69.191	ENSCGRG00001020102	-	100	72.806	Cricetulus_griseus_chok1gshd
ENSLAFG00000011998	RBM47	100	92.127	ENSCGRG00001000623	-	100	92.127	Cricetulus_griseus_chok1gshd
ENSLAFG00000011998	RBM47	100	91.290	ENSCGRG00000007762	-	100	93.038	Cricetulus_griseus_crigri
ENSLAFG00000011998	RBM47	100	68.847	ENSCGRG00000014760	-	100	72.461	Cricetulus_griseus_crigri
ENSLAFG00000011998	RBM47	100	74.791	ENSCSEG00000004545	rbm47	100	75.000	Cynoglossus_semilaevis
ENSLAFG00000011998	RBM47	100	75.336	ENSCVAG00000020144	rbm47	100	79.540	Cyprinodon_variegatus
ENSLAFG00000011998	RBM47	100	75.246	ENSDARG00000061985	rbm47	100	75.456	Danio_rerio
ENSLAFG00000011998	RBM47	100	92.101	ENSDNOG00000046854	RBM47	100	93.782	Dasypus_novemcinctus
ENSLAFG00000011998	RBM47	100	93.645	ENSDORG00000010144	Rbm47	100	93.311	Dipodomys_ordii
ENSLAFG00000011998	RBM47	100	94.799	ENSETEG00000009194	RBM47	100	95.302	Echinops_telfairi
ENSLAFG00000011998	RBM47	99	58.814	ENSEBUG00000011912	rbm47	99	60.000	Eptatretus_burgeri
ENSLAFG00000011998	RBM47	100	95.966	ENSEASG00005008443	RBM47	100	95.966	Equus_asinus_asinus
ENSLAFG00000011998	RBM47	100	95.966	ENSECAG00000004400	RBM47	100	95.966	Equus_caballus
ENSLAFG00000011998	RBM47	76	94.805	ENSEEUG00000001194	RBM47	75	94.805	Erinaceus_europaeus
ENSLAFG00000011998	RBM47	99	75.839	ENSELUG00000006148	rbm47	96	83.155	Esox_lucius
ENSLAFG00000011998	RBM47	100	95.455	ENSFCAG00000012399	RBM47	100	95.455	Felis_catus
ENSLAFG00000011998	RBM47	100	89.933	ENSFALG00000002861	RBM47	100	89.765	Ficedula_albicollis
ENSLAFG00000011998	RBM47	100	92.101	ENSFDAG00000016326	RBM47	100	92.605	Fukomys_damarensis
ENSLAFG00000011998	RBM47	100	77.554	ENSFHEG00000007938	rbm47	100	76.231	Fundulus_heteroclitus
ENSLAFG00000011998	RBM47	100	74.351	ENSGMOG00000014802	rbm47	100	73.377	Gadus_morhua
ENSLAFG00000011998	RBM47	63	91.489	ENSGALG00000014267	RBM47	99	91.489	Gallus_gallus
ENSLAFG00000011998	RBM47	63	84.759	ENSGAFG00000020571	rbm47	98	82.133	Gambusia_affinis
ENSLAFG00000011998	RBM47	100	73.453	ENSGACG00000016223	rbm47	100	76.982	Gasterosteus_aculeatus
ENSLAFG00000011998	RBM47	100	89.816	ENSGAGG00000020051	RBM47	100	89.983	Gopherus_agassizii
ENSLAFG00000011998	RBM47	100	94.622	ENSGGOG00000001367	RBM47	100	96.800	Gorilla_gorilla
ENSLAFG00000011998	RBM47	100	76.307	ENSHBUG00000003520	rbm47	100	80.103	Haplochromis_burtoni
ENSLAFG00000011998	RBM47	84	85.039	ENSHGLG00000016914	RBM47	100	94.304	Heterocephalus_glaber_female
ENSLAFG00000011998	RBM47	100	92.088	ENSHGLG00100014028	-	100	94.304	Heterocephalus_glaber_male
ENSLAFG00000011998	RBM47	100	83.165	ENSHGLG00100003071	-	100	83.333	Heterocephalus_glaber_male
ENSLAFG00000011998	RBM47	99	75.960	ENSHCOG00000002074	rbm47	99	79.284	Hippocampus_comes
ENSLAFG00000011998	RBM47	100	78.061	ENSIPUG00000004743	rbm47	100	77.211	Ictalurus_punctatus
ENSLAFG00000011998	RBM47	100	93.456	ENSSTOG00000004727	RBM47	100	94.631	Ictidomys_tridecemlineatus
ENSLAFG00000011998	RBM47	100	91.457	ENSJJAG00000013823	Rbm47	100	92.797	Jaculus_jaculus
ENSLAFG00000011998	RBM47	100	77.152	ENSKMAG00000000084	rbm47	100	78.517	Kryptolebias_marmoratus
ENSLAFG00000011998	RBM47	100	76.795	ENSLBEG00000008436	rbm47	100	78.772	Labrus_bergylta
ENSLAFG00000011998	RBM47	100	85.427	ENSLACG00000007196	RBM47	100	85.260	Latimeria_chalumnae
ENSLAFG00000011998	RBM47	100	81.463	ENSLOCG00000012966	rbm47	95	80.612	Lepisosteus_oculatus
ENSLAFG00000011998	RBM47	100	94.622	ENSMFAG00000037967	RBM47	100	96.800	Macaca_fascicularis
ENSLAFG00000011998	RBM47	100	94.622	ENSMMUG00000012036	RBM47	100	96.891	Macaca_mulatta
ENSLAFG00000011998	RBM47	100	94.454	ENSMNEG00000040774	RBM47	100	96.533	Macaca_nemestrina
ENSLAFG00000011998	RBM47	100	98.095	ENSMLEG00000041432	RBM47	100	98.095	Mandrillus_leucophaeus
ENSLAFG00000011998	RBM47	100	76.432	ENSMAMG00000019143	rbm47	99	80.412	Mastacembelus_armatus
ENSLAFG00000011998	RBM47	100	76.393	ENSMZEG00005023659	rbm47	99	80.103	Maylandia_zebra
ENSLAFG00000011998	RBM47	100	89.649	ENSMGAG00000012226	RBM47	100	89.816	Meleagris_gallopavo
ENSLAFG00000011998	RBM47	100	92.450	ENSMAUG00000006493	Rbm47	100	93.671	Mesocricetus_auratus
ENSLAFG00000011998	RBM47	100	88.640	ENSMICG00000026417	RBM47	100	89.572	Microcebus_murinus
ENSLAFG00000011998	RBM47	100	93.277	ENSMOCG00000021170	Rbm47	100	94.937	Microtus_ochrogaster
ENSLAFG00000011998	RBM47	100	76.307	ENSMMOG00000007260	rbm47	100	75.654	Mola_mola
ENSLAFG00000011998	RBM47	100	90.404	ENSMODG00000007003	RBM47	100	90.404	Monodelphis_domestica
ENSLAFG00000011998	RBM47	100	80.976	ENSMODG00000020561	-	100	80.640	Monodelphis_domestica
ENSLAFG00000011998	RBM47	54	81.731	ENSMODG00000015426	-	99	78.233	Monodelphis_domestica
ENSLAFG00000011998	RBM47	100	76.795	ENSMALG00000005167	rbm47	100	77.892	Monopterus_albus
ENSLAFG00000011998	RBM47	100	92.269	MGP_CAROLIEiJ_G0027258	Rbm47	100	93.038	Mus_caroli
ENSLAFG00000011998	RBM47	100	92.605	ENSMUSG00000070780	Rbm47	100	93.277	Mus_musculus
ENSLAFG00000011998	RBM47	100	92.269	MGP_PahariEiJ_G0017040	Rbm47	100	92.941	Mus_pahari
ENSLAFG00000011998	RBM47	100	92.269	MGP_SPRETEiJ_G0028253	Rbm47	100	93.038	Mus_spretus
ENSLAFG00000011998	RBM47	100	96.296	ENSMPUG00000006177	RBM47	94	96.296	Mustela_putorius_furo
ENSLAFG00000011998	RBM47	100	92.114	ENSMLUG00000000889	RBM47	100	91.779	Myotis_lucifugus
ENSLAFG00000011998	RBM47	100	92.450	ENSNGAG00000003325	Rbm47	100	93.121	Nannospalax_galili
ENSLAFG00000011998	RBM47	100	76.596	ENSNBRG00000015092	rbm47	100	76.105	Neolamprologus_brichardi
ENSLAFG00000011998	RBM47	100	94.286	ENSNLEG00000017151	RBM47	100	96.800	Nomascus_leucogenys
ENSLAFG00000011998	RBM47	74	85.548	ENSMEUG00000009516	-	100	86.247	Notamacropus_eugenii
ENSLAFG00000011998	RBM47	75	95.851	ENSOPRG00000016507	-	75	95.851	Ochotona_princeps
ENSLAFG00000011998	RBM47	100	92.941	ENSODEG00000004873	RBM47	100	94.622	Octodon_degus
ENSLAFG00000011998	RBM47	100	75.856	ENSONIG00000009061	rbm47	100	74.551	Oreochromis_niloticus
ENSLAFG00000011998	RBM47	100	86.000	ENSOANG00000008978	RBM47	100	86.833	Ornithorhynchus_anatinus
ENSLAFG00000011998	RBM47	100	94.118	ENSOCUG00000012034	RBM47	100	94.118	Oryctolagus_cuniculus
ENSLAFG00000011998	RBM47	100	77.258	ENSORLG00000005847	rbm47	100	79.124	Oryzias_latipes
ENSLAFG00000011998	RBM47	100	77.425	ENSORLG00020005154	rbm47	100	79.124	Oryzias_latipes_hni
ENSLAFG00000011998	RBM47	100	77.258	ENSORLG00015000066	rbm47	100	78.866	Oryzias_latipes_hsok
ENSLAFG00000011998	RBM47	100	78.392	ENSOMEG00000010730	rbm47	100	77.496	Oryzias_melastigma
ENSLAFG00000011998	RBM47	100	94.108	ENSOGAG00000029367	-	100	95.286	Otolemur_garnettii
ENSLAFG00000011998	RBM47	100	86.027	ENSOGAG00000025193	-	100	87.205	Otolemur_garnettii
ENSLAFG00000011998	RBM47	100	85.378	ENSOARG00000012711	RBM47	100	86.789	Ovis_aries
ENSLAFG00000011998	RBM47	100	94.454	ENSPPAG00000029763	RBM47	100	94.622	Pan_paniscus
ENSLAFG00000011998	RBM47	100	92.929	ENSPPRG00000012873	RBM47	100	96.800	Panthera_pardus
ENSLAFG00000011998	RBM47	85	91.485	ENSPTIG00000017046	RBM47	100	91.881	Panthera_tigris_altaica
ENSLAFG00000011998	RBM47	100	94.622	ENSPTRG00000016006	RBM47	100	96.800	Pan_troglodytes
ENSLAFG00000011998	RBM47	100	94.622	ENSPANG00000005980	RBM47	100	96.800	Papio_anubis
ENSLAFG00000011998	RBM47	97	76.562	ENSPKIG00000005037	rbm47	100	73.826	Paramormyrops_kingsleyae
ENSLAFG00000011998	RBM47	97	74.221	ENSPKIG00000013431	RBM47	98	80.570	Paramormyrops_kingsleyae
ENSLAFG00000011998	RBM47	89	90.395	ENSPSIG00000017516	RBM47	97	90.019	Pelodiscus_sinensis
ENSLAFG00000011998	RBM47	100	75.932	ENSPMGG00000018540	rbm47	100	76.610	Periophthalmus_magnuspinnatus
ENSLAFG00000011998	RBM47	100	92.785	ENSPEMG00000011088	Rbm47	100	93.792	Peromyscus_maniculatus_bairdii
ENSLAFG00000011998	RBM47	97	79.896	ENSPFOG00000007997	rbm47	100	75.407	Poecilia_formosa
ENSLAFG00000011998	RBM47	97	79.549	ENSPLAG00000002072	rbm47	100	81.818	Poecilia_latipinna
ENSLAFG00000011998	RBM47	100	79.062	ENSPMEG00000017492	rbm47	100	79.284	Poecilia_mexicana
ENSLAFG00000011998	RBM47	97	79.723	ENSPREG00000008456	rbm47	100	82.353	Poecilia_reticulata
ENSLAFG00000011998	RBM47	98	80.912	ENSPPYG00000014688	RBM47	100	80.405	Pongo_abelii
ENSLAFG00000011998	RBM47	81	97.744	ENSPCAG00000011879	RBM47	81	97.744	Procavia_capensis
ENSLAFG00000011998	RBM47	100	90.556	ENSPCOG00000023451	RBM47	100	91.231	Propithecus_coquereli
ENSLAFG00000011998	RBM47	100	92.450	ENSPVAG00000003812	RBM47	100	93.792	Pteropus_vampyrus
ENSLAFG00000011998	RBM47	100	76.346	ENSPNYG00000022868	rbm47	100	75.856	Pundamilia_nyererei
ENSLAFG00000011998	RBM47	100	75.327	ENSPNAG00000007940	rbm47	100	75.163	Pygocentrus_nattereri
ENSLAFG00000011998	RBM47	100	92.605	ENSRNOG00000002408	Rbm47	100	93.277	Rattus_norvegicus
ENSLAFG00000011998	RBM47	100	94.790	ENSRBIG00000039601	RBM47	100	96.800	Rhinopithecus_bieti
ENSLAFG00000011998	RBM47	100	94.790	ENSRROG00000044696	RBM47	100	96.800	Rhinopithecus_roxellana
ENSLAFG00000011998	RBM47	100	92.228	ENSSBOG00000028475	RBM47	100	94.835	Saimiri_boliviensis_boliviensis
ENSLAFG00000011998	RBM47	100	91.246	ENSSHAG00000017576	RBM47	100	91.751	Sarcophilus_harrisii
ENSLAFG00000011998	RBM47	100	72.742	ENSSFOG00015012445	rbm47	100	72.408	Scleropages_formosus
ENSLAFG00000011998	RBM47	99	74.363	ENSSFOG00015024101	RBM47	99	73.854	Scleropages_formosus
ENSLAFG00000011998	RBM47	100	74.551	ENSSMAG00000009744	rbm47	100	77.378	Scophthalmus_maximus
ENSLAFG00000011998	RBM47	100	78.261	ENSSDUG00000022684	rbm47	100	76.728	Seriola_dumerili
ENSLAFG00000011998	RBM47	100	79.264	ENSSLDG00000003109	rbm47	100	78.734	Seriola_lalandi_dorsalis
ENSLAFG00000011998	RBM47	86	92.617	ENSSARG00000001735	RBM47	84	93.736	Sorex_araneus
ENSLAFG00000011998	RBM47	100	87.905	ENSSPUG00000007515	RBM47	100	89.600	Sphenodon_punctatus
ENSLAFG00000011998	RBM47	100	78.464	ENSSPAG00000001257	rbm47	100	79.028	Stegastes_partitus
ENSLAFG00000011998	RBM47	100	95.966	ENSSSCG00000008796	RBM47	100	95.966	Sus_scrofa
ENSLAFG00000011998	RBM47	100	89.597	ENSTGUG00000008705	RBM47	100	89.262	Taeniopygia_guttata
ENSLAFG00000011998	RBM47	100	76.949	ENSTRUG00000014050	rbm47	100	76.271	Takifugu_rubripes
ENSLAFG00000011998	RBM47	99	77.041	ENSTNIG00000006127	rbm47	97	76.190	Tetraodon_nigroviridis
ENSLAFG00000011998	RBM47	78	90.000	ENSTBEG00000001607	RBM47	76	91.250	Tupaia_belangeri
ENSLAFG00000011998	RBM47	100	92.437	ENSTTRG00000002839	RBM47	100	93.613	Tursiops_truncatus
ENSLAFG00000011998	RBM47	100	95.623	ENSUAMG00000021346	RBM47	100	95.623	Ursus_americanus
ENSLAFG00000011998	RBM47	57	95.205	ENSVPAG00000000641	-	57	96.575	Vicugna_pacos
ENSLAFG00000011998	RBM47	96	93.706	ENSVVUG00000014774	RBM47	100	92.785	Vulpes_vulpes
ENSLAFG00000011998	RBM47	100	84.925	ENSXETG00000012802	rbm47	100	84.590	Xenopus_tropicalis
ENSLAFG00000011998	RBM47	88	84.492	ENSXCOG00000000780	rbm47	100	82.086	Xiphophorus_couchianus
ENSLAFG00000011998	RBM47	100	77.554	ENSXMAG00000009874	rbm47	100	79.284	Xiphophorus_maculatus