EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000012755 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 40747 bases
Position: chrscaffold_0:92502100-92542846
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000010669	KH_1	PF00013.29	9.2e-08	1	1
ENSLAFP00000010669	DEAD	PF00270.29	6.9e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000012759	-	1809	-	ENSLAFP00000010669	603 (aa)	-	G3TA14

Gene Model

Click here to download ENSLAFG00000012755's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000012755's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000012755	-	55	37.026	ENSLAFG00000006915	DDX18	50	37.026
ENSLAFG00000012755	-	65	35.910	ENSLAFG00000015474	DDX47	85	35.910
ENSLAFG00000012755	-	73	44.295	ENSLAFG00000004461	DDX5	67	44.295
ENSLAFG00000012755	-	59	32.312	ENSLAFG00000005951	DDX10	61	30.370
ENSLAFG00000012755	-	59	32.676	ENSLAFG00000015628	EIF4A3	85	32.676
ENSLAFG00000012755	-	64	40.506	ENSLAFG00000005900	DDX4	56	40.506
ENSLAFG00000012755	-	97	73.514	ENSLAFG00000011531	-	93	73.514
ENSLAFG00000012755	-	58	32.591	ENSLAFG00000002635	DDX52	92	32.880
ENSLAFG00000012755	-	57	31.198	ENSLAFG00000007293	DDX55	60	31.198
ENSLAFG00000012755	-	59	33.708	ENSLAFG00000011012	DDX6	72	33.708
ENSLAFG00000012755	-	73	44.866	ENSLAFG00000009820	-	90	44.643
ENSLAFG00000012755	-	68	36.842	ENSLAFG00000026418	DDX41	67	36.842
ENSLAFG00000012755	-	60	36.856	ENSLAFG00000012190	DDX27	52	35.854
ENSLAFG00000012755	-	73	39.540	ENSLAFG00000014227	DDX23	57	39.540
ENSLAFG00000012755	-	61	40.674	ENSLAFG00000017378	DDX3X	61	39.356
ENSLAFG00000012755	-	59	34.366	ENSLAFG00000001107	EIF4A1	91	32.632
ENSLAFG00000012755	-	61	32.973	ENSLAFG00000003619	EIF4A2	89	32.973
ENSLAFG00000012755	-	60	30.588	ENSLAFG00000015379	DDX31	61	30.588
ENSLAFG00000012755	-	65	34.390	ENSLAFG00000002934	DDX49	83	34.390

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000012755	-	99	84.053	ENSAMEG00000007851	-	93	84.185	Ailuropoda_melanoleuca
ENSLAFG00000012755	-	99	80.597	ENSBTAG00000021814	-	93	80.597	Bos_taurus
ENSLAFG00000012755	-	100	77.944	ENSCAFG00020002717	-	93	77.944	Canis_lupus_dingo
ENSLAFG00000012755	-	100	83.140	ENSCAFG00020010029	-	93	83.140	Canis_lupus_dingo
ENSLAFG00000012755	-	99	80.265	ENSCHIG00000017351	-	93	80.265	Capra_hircus
ENSLAFG00000012755	-	83	78.884	ENSCAPG00000004247	-	100	78.884	Cavia_aperea
ENSLAFG00000012755	-	99	85.167	ENSCPOG00000003991	-	93	85.289	Cavia_porcellus
ENSLAFG00000012755	-	99	77.129	ENSCLAG00000010261	-	92	77.888	Chinchilla_lanigera
ENSLAFG00000012755	-	66	83.136	ENSCHOG00000003450	-	70	83.136	Choloepus_hoffmanni
ENSLAFG00000012755	-	100	84.653	ENSCGRG00001001145	Ddx43	93	84.653	Cricetulus_griseus_chok1gshd
ENSLAFG00000012755	-	93	86.549	ENSCGRG00000010217	Ddx43	100	86.549	Cricetulus_griseus_crigri
ENSLAFG00000012755	-	99	88.020	ENSDNOG00000017589	-	93	87.954	Dasypus_novemcinctus
ENSLAFG00000012755	-	99	85.167	ENSDORG00000030010	Ddx43	93	85.099	Dipodomys_ordii
ENSLAFG00000012755	-	78	94.985	ENSETEG00000001887	-	74	94.985	Echinops_telfairi
ENSLAFG00000012755	-	100	88.119	ENSEASG00005004346	-	85	88.119	Equus_asinus_asinus
ENSLAFG00000012755	-	100	87.954	ENSECAG00000017971	DDX43	94	87.954	Equus_caballus
ENSLAFG00000012755	-	99	80.699	ENSFCAG00000031631	-	93	80.858	Felis_catus
ENSLAFG00000012755	-	93	84.071	ENSHGLG00000001118	-	100	84.071	Heterocephalus_glaber_female
ENSLAFG00000012755	-	97	83.077	ENSHGLG00100011895	-	95	81.518	Heterocephalus_glaber_male
ENSLAFG00000012755	-	93	77.345	ENSSTOG00000032538	-	100	77.345	Ictidomys_tridecemlineatus
ENSLAFG00000012755	-	99	84.526	ENSJJAG00000014184	Ddx43	94	83.687	Jaculus_jaculus
ENSLAFG00000012755	-	100	84.818	ENSMAUG00000001441	Ddx43	93	84.818	Mesocricetus_auratus
ENSLAFG00000012755	-	100	82.566	ENSMOCG00000012956	Ddx43	93	83.224	Microtus_ochrogaster
ENSLAFG00000012755	-	100	84.793	MGP_CAROLIEiJ_G0032467	Ddx43	93	84.793	Mus_caroli
ENSLAFG00000012755	-	100	85.124	ENSMUSG00000070291	Ddx43	93	85.124	Mus_musculus
ENSLAFG00000012755	-	83	88.095	MGP_PahariEiJ_G0015333	Ddx43	92	88.095	Mus_pahari
ENSLAFG00000012755	-	100	85.124	MGP_SPRETEiJ_G0033607	Ddx43	93	85.124	Mus_spretus
ENSLAFG00000012755	-	97	85.763	ENSMPUG00000004342	-	93	84.323	Mustela_putorius_furo
ENSLAFG00000012755	-	99	85.904	ENSMLUG00000017604	-	93	85.855	Myotis_lucifugus
ENSLAFG00000012755	-	99	84.692	ENSNGAG00000015102	Ddx43	94	83.987	Nannospalax_galili
ENSLAFG00000012755	-	80	86.607	ENSOPRG00000013523	-	86	86.607	Ochotona_princeps
ENSLAFG00000012755	-	90	83.333	ENSODEG00000016207	-	99	83.333	Octodon_degus
ENSLAFG00000012755	-	98	67.797	ENSOCUG00000025811	-	90	67.797	Oryctolagus_cuniculus
ENSLAFG00000012755	-	99	79.299	ENSOCUG00000006338	-	93	79.305	Oryctolagus_cuniculus
ENSLAFG00000012755	-	99	79.934	ENSOARG00000010873	-	93	79.934	Ovis_aries
ENSLAFG00000012755	-	99	81.032	ENSPTIG00000017842	-	93	81.188	Panthera_tigris_altaica
ENSLAFG00000012755	-	93	87.080	ENSPEMG00000023986	Ddx43	100	87.080	Peromyscus_maniculatus_bairdii
ENSLAFG00000012755	-	99	91.472	ENSPCAG00000005962	-	93	91.542	Procavia_capensis
ENSLAFG00000012755	-	93	89.912	ENSPVAG00000012718	-	99	89.912	Pteropus_vampyrus
ENSLAFG00000012755	-	100	84.298	ENSRNOG00000050868	Ddx43	93	84.959	Rattus_norvegicus
ENSLAFG00000012755	-	90	86.496	ENSSARG00000013493	-	99	86.496	Sorex_araneus
ENSLAFG00000012755	-	97	82.453	ENSSSCG00000004287	-	93	81.561	Sus_scrofa
ENSLAFG00000012755	-	93	74.067	ENSTTRG00000001488	-	99	74.067	Tursiops_truncatus
ENSLAFG00000012755	-	81	80.444	ENSUAMG00000012894	-	76	80.639	Ursus_americanus
ENSLAFG00000012755	-	99	84.053	ENSUMAG00000012291	-	93	84.185	Ursus_maritimus
ENSLAFG00000012755	-	91	75.091	ENSVPAG00000004969	-	93	74.427	Vicugna_pacos
ENSLAFG00000012755	-	100	83.306	ENSVVUG00000013908	-	93	83.306	Vulpes_vulpes