EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000012831 (Gene tree)
Gene ID: -
Gene Symbol: POLR1E
Alias: FLJ13390|FLJ13970|PAF53|PRAF1
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 15341 bases
Position: chrscaffold_6:62789128-62804468
Accession: 17631
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000010732	RNA_pol_I_A49	PF06870.12	2.1e-109	1	1
ENSLAFP00000020736	RNA_pol_I_A49	PF06870.12	1.1e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000012836	POLR1E-202	1266	-	ENSLAFP00000010732	421 (aa)	-	G3TA66
ENSLAFT00000027527	POLR1E-201	1416	-	ENSLAFP00000020736	471 (aa)	-	G3TYS8

Gene Model

Click here to download ENSLAFG00000012831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000012831's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000012831	POLR1E	99	87.589	ENSG00000137054	POLR1E	100	87.589	Homo_sapiens
ENSLAFG00000012831	POLR1E	98	43.373	ENSAPOG00000012452	polr1e	96	61.176	Acanthochromis_polyacanthus
ENSLAFG00000012831	POLR1E	100	80.672	ENSAMEG00000010193	POLR1E	97	80.672	Ailuropoda_melanoleuca
ENSLAFG00000012831	POLR1E	93	44.304	ENSACIG00000009884	polr1e	98	55.789	Amphilophus_citrinellus
ENSLAFG00000012831	POLR1E	98	46.135	ENSAOCG00000005665	polr1e	99	46.135	Amphiprion_ocellaris
ENSLAFG00000012831	POLR1E	98	46.265	ENSAPEG00000020581	polr1e	99	46.265	Amphiprion_percula
ENSLAFG00000012831	POLR1E	94	48.120	ENSATEG00000020609	polr1e	95	48.120	Anabas_testudineus
ENSLAFG00000012831	POLR1E	82	56.777	ENSAPLG00000010340	POLR1E	99	56.777	Anas_platyrhynchos
ENSLAFG00000012831	POLR1E	99	87.112	ENSANAG00000038046	POLR1E	100	87.112	Aotus_nancymaae
ENSLAFG00000012831	POLR1E	99	44.366	ENSACLG00000013685	polr1e	99	44.366	Astatotilapia_calliptera
ENSLAFG00000012831	POLR1E	97	43.204	ENSAMXG00000018181	polr1e	98	43.204	Astyanax_mexicanus
ENSLAFG00000012831	POLR1E	99	87.351	ENSBTAG00000012243	POLR1E	100	87.351	Bos_taurus
ENSLAFG00000012831	POLR1E	89	86.631	ENSCJAG00000010512	POLR1E	93	86.631	Callithrix_jacchus
ENSLAFG00000012831	POLR1E	99	87.589	ENSCAFG00000002377	POLR1E	100	87.589	Canis_familiaris
ENSLAFG00000012831	POLR1E	99	87.828	ENSCAFG00020017851	POLR1E	100	87.828	Canis_lupus_dingo
ENSLAFG00000012831	POLR1E	99	86.635	ENSCHIG00000019479	POLR1E	100	86.635	Capra_hircus
ENSLAFG00000012831	POLR1E	99	86.396	ENSTSYG00000002075	POLR1E	100	86.396	Carlito_syrichta
ENSLAFG00000012831	POLR1E	68	84.669	ENSCAPG00000015653	POLR1E	99	84.669	Cavia_aperea
ENSLAFG00000012831	POLR1E	99	84.689	ENSCPOG00000009965	POLR1E	100	84.689	Cavia_porcellus
ENSLAFG00000012831	POLR1E	99	79.952	ENSCCAG00000029460	POLR1E	100	89.412	Cebus_capucinus
ENSLAFG00000012831	POLR1E	99	87.589	ENSCATG00000031732	POLR1E	100	91.228	Cercocebus_atys
ENSLAFG00000012831	POLR1E	87	88.556	ENSCLAG00000012701	POLR1E	96	88.556	Chinchilla_lanigera
ENSLAFG00000012831	POLR1E	99	87.351	ENSCSAG00000010782	POLR1E	100	87.351	Chlorocebus_sabaeus
ENSLAFG00000012831	POLR1E	94	76.396	ENSCHOG00000013024	POLR1E	78	86.667	Choloepus_hoffmanni
ENSLAFG00000012831	POLR1E	98	67.153	ENSCPBG00000006923	POLR1E	99	68.127	Chrysemys_picta_bellii
ENSLAFG00000012831	POLR1E	99	87.112	ENSCANG00000036112	POLR1E	100	90.351	Colobus_angolensis_palliatus
ENSLAFG00000012831	POLR1E	99	81.146	ENSCGRG00001006197	Polr1e	97	81.146	Cricetulus_griseus_chok1gshd
ENSLAFG00000012831	POLR1E	99	80.668	ENSCGRG00000006430	Polr1e	97	80.668	Cricetulus_griseus_crigri
ENSLAFG00000012831	POLR1E	93	44.304	ENSCSEG00000005121	polr1e	96	44.304	Cynoglossus_semilaevis
ENSLAFG00000012831	POLR1E	98	42.754	ENSCVAG00000019759	polr1e	99	42.754	Cyprinodon_variegatus
ENSLAFG00000012831	POLR1E	93	45.844	ENSDARG00000006434	polr1e	98	44.903	Danio_rerio
ENSLAFG00000012831	POLR1E	99	79.830	ENSDNOG00000010257	POLR1E	99	79.830	Dasypus_novemcinctus
ENSLAFG00000012831	POLR1E	85	84.358	ENSETEG00000018204	POLR1E	99	84.358	Echinops_telfairi
ENSLAFG00000012831	POLR1E	57	38.060	ENSEBUG00000010635	-	91	30.154	Eptatretus_burgeri
ENSLAFG00000012831	POLR1E	99	89.499	ENSEASG00005000675	POLR1E	100	89.499	Equus_asinus_asinus
ENSLAFG00000012831	POLR1E	99	89.737	ENSECAG00000014669	POLR1E	100	89.737	Equus_caballus
ENSLAFG00000012831	POLR1E	79	88.764	ENSEEUG00000011928	POLR1E	82	80.583	Erinaceus_europaeus
ENSLAFG00000012831	POLR1E	96	46.324	ENSELUG00000008150	polr1e	97	46.324	Esox_lucius
ENSLAFG00000012831	POLR1E	99	87.589	ENSFCAG00000013081	POLR1E	100	87.589	Felis_catus
ENSLAFG00000012831	POLR1E	93	61.069	ENSFALG00000012950	POLR1E	99	61.069	Ficedula_albicollis
ENSLAFG00000012831	POLR1E	99	84.450	ENSFDAG00000016917	POLR1E	100	84.450	Fukomys_damarensis
ENSLAFG00000012831	POLR1E	98	44.819	ENSFHEG00000009801	polr1e	99	44.819	Fundulus_heteroclitus
ENSLAFG00000012831	POLR1E	84	48.077	ENSGMOG00000003336	POLR1E	93	48.077	Gadus_morhua
ENSLAFG00000012831	POLR1E	98	60.533	ENSGALG00000005395	POLR1E	99	60.533	Gallus_gallus
ENSLAFG00000012831	POLR1E	98	44.976	ENSGAFG00000004850	polr1e	99	44.976	Gambusia_affinis
ENSLAFG00000012831	POLR1E	98	42.482	ENSGACG00000016087	polr1e	99	42.482	Gasterosteus_aculeatus
ENSLAFG00000012831	POLR1E	97	60.341	ENSGAGG00000001659	POLR1E	97	74.725	Gopherus_agassizii
ENSLAFG00000012831	POLR1E	99	87.351	ENSGGOG00000001882	POLR1E	100	90.351	Gorilla_gorilla
ENSLAFG00000012831	POLR1E	99	44.836	ENSHBUG00000002559	polr1e	99	44.836	Haplochromis_burtoni
ENSLAFG00000012831	POLR1E	99	85.646	ENSHGLG00000002036	POLR1E	100	85.646	Heterocephalus_glaber_female
ENSLAFG00000012831	POLR1E	99	85.885	ENSHGLG00100012784	POLR1E	100	85.885	Heterocephalus_glaber_male
ENSLAFG00000012831	POLR1E	98	44.686	ENSHCOG00000002774	polr1e	99	44.686	Hippocampus_comes
ENSLAFG00000012831	POLR1E	97	43.689	ENSIPUG00000003019	polr1e	98	43.689	Ictalurus_punctatus
ENSLAFG00000012831	POLR1E	99	86.158	ENSSTOG00000009810	POLR1E	100	86.158	Ictidomys_tridecemlineatus
ENSLAFG00000012831	POLR1E	100	82.898	ENSJJAG00000020731	Polr1e	97	82.898	Jaculus_jaculus
ENSLAFG00000012831	POLR1E	98	42.271	ENSKMAG00000000046	polr1e	99	42.271	Kryptolebias_marmoratus
ENSLAFG00000012831	POLR1E	99	45.933	ENSLBEG00000003104	polr1e	99	45.933	Labrus_bergylta
ENSLAFG00000012831	POLR1E	85	62.050	ENSLACG00000003416	POLR1E	99	62.050	Latimeria_chalumnae
ENSLAFG00000012831	POLR1E	99	49.289	ENSLOCG00000012859	polr1e	99	49.289	Lepisosteus_oculatus
ENSLAFG00000012831	POLR1E	100	87.886	ENSMFAG00000045465	POLR1E	100	91.228	Macaca_fascicularis
ENSLAFG00000012831	POLR1E	99	87.828	ENSMMUG00000017892	POLR1E	100	91.228	Macaca_mulatta
ENSLAFG00000012831	POLR1E	99	81.776	ENSMNEG00000040283	POLR1E	99	86.283	Macaca_nemestrina
ENSLAFG00000012831	POLR1E	99	87.828	ENSMLEG00000031135	POLR1E	100	91.228	Mandrillus_leucophaeus
ENSLAFG00000012831	POLR1E	99	42.925	ENSMAMG00000001260	polr1e	99	42.925	Mastacembelus_armatus
ENSLAFG00000012831	POLR1E	99	44.601	ENSMZEG00005021536	polr1e	99	44.601	Maylandia_zebra
ENSLAFG00000012831	POLR1E	100	80.760	ENSMAUG00000021044	Polr1e	97	80.760	Mesocricetus_auratus
ENSLAFG00000012831	POLR1E	99	89.021	ENSMICG00000003673	POLR1E	100	89.021	Microcebus_murinus
ENSLAFG00000012831	POLR1E	99	80.952	ENSMOCG00000012920	Polr1e	97	80.952	Microtus_ochrogaster
ENSLAFG00000012831	POLR1E	98	44.578	ENSMMOG00000007391	polr1e	99	44.578	Mola_mola
ENSLAFG00000012831	POLR1E	94	74.747	ENSMODG00000002884	POLR1E	97	74.747	Monodelphis_domestica
ENSLAFG00000012831	POLR1E	99	44.235	ENSMALG00000002665	polr1e	99	44.235	Monopterus_albus
ENSLAFG00000012831	POLR1E	99	77.619	MGP_CAROLIEiJ_G0025967	Polr1e	97	78.626	Mus_caroli
ENSLAFG00000012831	POLR1E	99	78.571	ENSMUSG00000028318	Polr1e	97	79.389	Mus_musculus
ENSLAFG00000012831	POLR1E	99	79.048	MGP_PahariEiJ_G0024114	Polr1e	97	79.898	Mus_pahari
ENSLAFG00000012831	POLR1E	99	77.619	MGP_SPRETEiJ_G0026930	Polr1e	97	78.372	Mus_spretus
ENSLAFG00000012831	POLR1E	100	82.030	ENSMPUG00000006040	POLR1E	100	82.030	Mustela_putorius_furo
ENSLAFG00000012831	POLR1E	100	87.648	ENSMLUG00000012688	POLR1E	97	87.648	Myotis_lucifugus
ENSLAFG00000012831	POLR1E	100	83.373	ENSNGAG00000002520	Polr1e	97	83.373	Nannospalax_galili
ENSLAFG00000012831	POLR1E	99	44.836	ENSNBRG00000016822	polr1e	99	44.836	Neolamprologus_brichardi
ENSLAFG00000012831	POLR1E	99	87.589	ENSNLEG00000003616	POLR1E	100	90.351	Nomascus_leucogenys
ENSLAFG00000012831	POLR1E	72	80.000	ENSMEUG00000015372	-	80	80.000	Notamacropus_eugenii
ENSLAFG00000012831	POLR1E	70	92.000	ENSOPRG00000014206	POLR1E	92	92.000	Ochotona_princeps
ENSLAFG00000012831	POLR1E	99	85.680	ENSODEG00000014565	POLR1E	97	85.680	Octodon_degus
ENSLAFG00000012831	POLR1E	99	45.161	ENSONIG00000008921	polr1e	99	45.070	Oreochromis_niloticus
ENSLAFG00000012831	POLR1E	99	85.203	ENSOCUG00000024773	POLR1E	100	85.203	Oryctolagus_cuniculus
ENSLAFG00000012831	POLR1E	98	45.411	ENSORLG00000005143	polr1e	99	45.411	Oryzias_latipes
ENSLAFG00000012831	POLR1E	93	41.117	ENSORLG00020007271	polr1e	95	48.958	Oryzias_latipes_hni
ENSLAFG00000012831	POLR1E	94	45.865	ENSORLG00015000137	polr1e	99	44.686	Oryzias_latipes_hsok
ENSLAFG00000012831	POLR1E	98	43.478	ENSOMEG00000013264	polr1e	97	43.478	Oryzias_melastigma
ENSLAFG00000012831	POLR1E	99	88.571	ENSOGAG00000012981	POLR1E	98	88.571	Otolemur_garnettii
ENSLAFG00000012831	POLR1E	100	86.936	ENSOARG00000011465	POLR1E	97	86.936	Ovis_aries
ENSLAFG00000012831	POLR1E	99	87.828	ENSPPAG00000034566	POLR1E	100	91.228	Pan_paniscus
ENSLAFG00000012831	POLR1E	99	88.067	ENSPPRG00000005649	POLR1E	100	88.067	Panthera_pardus
ENSLAFG00000012831	POLR1E	99	88.067	ENSPTIG00000009774	POLR1E	100	88.067	Panthera_tigris_altaica
ENSLAFG00000012831	POLR1E	99	87.828	ENSPTRG00000020944	POLR1E	100	91.228	Pan_troglodytes
ENSLAFG00000012831	POLR1E	99	87.828	ENSPANG00000025563	POLR1E	100	91.228	Papio_anubis
ENSLAFG00000012831	POLR1E	98	46.301	ENSPKIG00000003562	polr1e	99	46.539	Paramormyrops_kingsleyae
ENSLAFG00000012831	POLR1E	91	63.969	ENSPSIG00000003274	POLR1E	90	63.969	Pelodiscus_sinensis
ENSLAFG00000012831	POLR1E	94	44.000	ENSPMGG00000024169	polr1e	96	44.000	Periophthalmus_magnuspinnatus
ENSLAFG00000012831	POLR1E	99	65.558	ENSPEMG00000022300	-	96	76.522	Peromyscus_maniculatus_bairdii
ENSLAFG00000012831	POLR1E	99	79.286	ENSPEMG00000019151	-	97	79.286	Peromyscus_maniculatus_bairdii
ENSLAFG00000012831	POLR1E	94	74.242	ENSPCIG00000014798	POLR1E	97	74.242	Phascolarctos_cinereus
ENSLAFG00000012831	POLR1E	94	43.735	ENSPFOG00000019627	polr1e	95	43.735	Poecilia_formosa
ENSLAFG00000012831	POLR1E	94	46.115	ENSPLAG00000022679	polr1e	95	45.865	Poecilia_latipinna
ENSLAFG00000012831	POLR1E	85	44.722	ENSPMEG00000022123	polr1e	93	44.722	Poecilia_mexicana
ENSLAFG00000012831	POLR1E	98	44.125	ENSPREG00000009470	polr1e	99	43.885	Poecilia_reticulata
ENSLAFG00000012831	POLR1E	99	87.112	ENSPPYG00000019061	POLR1E	100	87.112	Pongo_abelii
ENSLAFG00000012831	POLR1E	72	76.316	ENSPCAG00000004891	POLR1E	100	76.316	Procavia_capensis
ENSLAFG00000012831	POLR1E	99	88.305	ENSPCOG00000027448	POLR1E	100	88.305	Propithecus_coquereli
ENSLAFG00000012831	POLR1E	94	88.579	ENSPVAG00000007940	POLR1E	83	88.579	Pteropus_vampyrus
ENSLAFG00000012831	POLR1E	99	44.601	ENSPNYG00000001032	polr1e	99	44.601	Pundamilia_nyererei
ENSLAFG00000012831	POLR1E	97	42.754	ENSPNAG00000006987	polr1e	99	42.754	Pygocentrus_nattereri
ENSLAFG00000012831	POLR1E	100	77.910	ENSRNOG00000012664	Polr1e	97	77.910	Rattus_norvegicus
ENSLAFG00000012831	POLR1E	99	83.855	ENSRBIG00000034214	POLR1E	100	86.877	Rhinopithecus_bieti
ENSLAFG00000012831	POLR1E	99	87.351	ENSRROG00000031986	POLR1E	100	91.228	Rhinopithecus_roxellana
ENSLAFG00000012831	POLR1E	99	86.396	ENSSBOG00000021415	POLR1E	100	86.396	Saimiri_boliviensis_boliviensis
ENSLAFG00000012831	POLR1E	82	74.203	ENSSHAG00000016084	POLR1E	96	74.203	Sarcophilus_harrisii
ENSLAFG00000012831	POLR1E	93	48.354	ENSSFOG00015002293	polr1e	95	48.354	Scleropages_formosus
ENSLAFG00000012831	POLR1E	96	48.284	ENSSMAG00000011672	polr1e	91	48.284	Scophthalmus_maximus
ENSLAFG00000012831	POLR1E	96	46.814	ENSSDUG00000022279	polr1e	97	46.814	Seriola_dumerili
ENSLAFG00000012831	POLR1E	96	46.569	ENSSLDG00000024918	polr1e	97	46.569	Seriola_lalandi_dorsalis
ENSLAFG00000012831	POLR1E	63	74.286	ENSSARG00000009810	-	67	74.286	Sorex_araneus
ENSLAFG00000012831	POLR1E	98	64.891	ENSSPUG00000009499	POLR1E	99	64.891	Sphenodon_punctatus
ENSLAFG00000012831	POLR1E	98	46.618	ENSSPAG00000021240	polr1e	99	46.618	Stegastes_partitus
ENSLAFG00000012831	POLR1E	99	87.112	ENSSSCG00000005347	POLR1E	100	87.112	Sus_scrofa
ENSLAFG00000012831	POLR1E	94	52.278	ENSTGUG00000007169	POLR1E	99	52.278	Taeniopygia_guttata
ENSLAFG00000012831	POLR1E	98	43.510	ENSTRUG00000020779	polr1e	99	44.357	Takifugu_rubripes
ENSLAFG00000012831	POLR1E	98	44.819	ENSTNIG00000017812	polr1e	99	44.819	Tetraodon_nigroviridis
ENSLAFG00000012831	POLR1E	100	84.323	ENSTBEG00000013786	POLR1E	88	84.323	Tupaia_belangeri
ENSLAFG00000012831	POLR1E	94	86.398	ENSTTRG00000008294	POLR1E	84	86.398	Tursiops_truncatus
ENSLAFG00000012831	POLR1E	99	88.783	ENSUAMG00000012474	POLR1E	100	90.191	Ursus_americanus
ENSLAFG00000012831	POLR1E	99	88.783	ENSUMAG00000011496	POLR1E	100	88.783	Ursus_maritimus
ENSLAFG00000012831	POLR1E	81	82.405	ENSVPAG00000009048	POLR1E	81	82.405	Vicugna_pacos
ENSLAFG00000012831	POLR1E	99	87.351	ENSVVUG00000019954	POLR1E	100	87.351	Vulpes_vulpes
ENSLAFG00000012831	POLR1E	98	51.691	ENSXETG00000006533	polr1e	99	51.691	Xenopus_tropicalis
ENSLAFG00000012831	POLR1E	98	43.165	ENSXCOG00000013706	polr1e	99	43.165	Xiphophorus_couchianus
ENSLAFG00000012831	POLR1E	98	44.844	ENSXMAG00000012484	polr1e	99	44.844	Xiphophorus_maculatus