EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000012919 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: FLJ11301
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 25060 bases
Position: chrscaffold_25:15255170-15280229
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000018359	MMR_HSR1	PF01926.23	8e-14	1	1
ENSLAFP00000010804	MMR_HSR1	PF01926.23	9.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000037167	-	1974	-	ENSLAFP00000018359	657 (aa)	-	G3TS01
ENSLAFT00000012922	-	1941	-	ENSLAFP00000010804	646 (aa)	-	G3TAC7

Gene Model

Click here to download ENSLAFG00000012919's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000012919's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000012919	-	69	30.819	ENSLAFG00000030406	GNL1	67	31.347

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000012919	-	100	83.460	ENSG00000041802	LSG1	98	89.080	Homo_sapiens
ENSLAFG00000012919	-	99	64.969	ENSAPOG00000009694	lsg1	99	65.586	Acanthochromis_polyacanthus
ENSLAFG00000012919	-	99	81.487	ENSAMEG00000009343	LSG1	99	81.487	Ailuropoda_melanoleuca
ENSLAFG00000012919	-	98	65.827	ENSACIG00000012406	lsg1	99	66.047	Amphilophus_citrinellus
ENSLAFG00000012919	-	99	64.561	ENSAOCG00000016066	lsg1	99	65.177	Amphiprion_ocellaris
ENSLAFG00000012919	-	99	65.023	ENSAPEG00000003252	lsg1	99	65.023	Amphiprion_percula
ENSLAFG00000012919	-	98	63.651	ENSATEG00000011794	lsg1	99	64.606	Anabas_testudineus
ENSLAFG00000012919	-	95	64.593	ENSACAG00000004222	LSG1	99	63.535	Anolis_carolinensis
ENSLAFG00000012919	-	100	84.522	ENSANAG00000021153	LSG1	100	84.522	Aotus_nancymaae
ENSLAFG00000012919	-	99	64.242	ENSACLG00000000520	lsg1	99	63.855	Astatotilapia_calliptera
ENSLAFG00000012919	-	99	62.629	ENSAMXG00000008271	lsg1	99	63.623	Astyanax_mexicanus
ENSLAFG00000012919	-	100	80.398	ENSBTAG00000008461	LSG1	100	81.930	Bos_taurus
ENSLAFG00000012919	-	62	51.269	WBGene00016907	C53H9.2	78	57.692	Caenorhabditis_elegans
ENSLAFG00000012919	-	100	83.460	ENSCJAG00000013962	LSG1	100	83.460	Callithrix_jacchus
ENSLAFG00000012919	-	95	83.040	ENSCAFG00000013445	LSG1	99	83.040	Canis_familiaris
ENSLAFG00000012919	-	99	81.392	ENSCAFG00020002216	LSG1	99	82.665	Canis_lupus_dingo
ENSLAFG00000012919	-	99	81.442	ENSCHIG00000015769	LSG1	99	81.442	Capra_hircus
ENSLAFG00000012919	-	100	82.094	ENSTSYG00000001447	LSG1	100	82.094	Carlito_syrichta
ENSLAFG00000012919	-	95	76.786	ENSCAPG00000009856	LSG1	100	76.423	Cavia_aperea
ENSLAFG00000012919	-	100	83.156	ENSCCAG00000035744	LSG1	100	83.156	Cebus_capucinus
ENSLAFG00000012919	-	100	83.915	ENSCATG00000042060	LSG1	100	82.549	Cercocebus_atys
ENSLAFG00000012919	-	100	84.067	ENSCSAG00000008796	LSG1	92	84.067	Chlorocebus_sabaeus
ENSLAFG00000012919	-	99	68.333	ENSCPBG00000015941	LSG1	83	68.485	Chrysemys_picta_bellii
ENSLAFG00000012919	-	73	61.780	ENSCING00000007079	-	98	61.780	Ciona_intestinalis
ENSLAFG00000012919	-	79	54.365	ENSCSAVG00000002514	-	90	61.735	Ciona_savignyi
ENSLAFG00000012919	-	100	83.612	ENSCANG00000030709	LSG1	100	83.612	Colobus_angolensis_palliatus
ENSLAFG00000012919	-	100	82.083	ENSCGRG00001019846	Lsg1	100	82.236	Cricetulus_griseus_chok1gshd
ENSLAFG00000012919	-	100	82.083	ENSCGRG00000014617	Lsg1	100	82.236	Cricetulus_griseus_crigri
ENSLAFG00000012919	-	98	64.441	ENSCSEG00000008522	lsg1	99	63.775	Cynoglossus_semilaevis
ENSLAFG00000012919	-	97	66.296	ENSCVAG00000002484	lsg1	99	66.512	Cyprinodon_variegatus
ENSLAFG00000012919	-	99	66.206	ENSDARG00000015352	lsg1	99	66.052	Danio_rerio
ENSLAFG00000012919	-	100	83.714	ENSDNOG00000006224	LSG1	100	83.409	Dasypus_novemcinctus
ENSLAFG00000012919	-	99	48.338	FBgn0266284	Ns3	99	48.706	Drosophila_melanogaster
ENSLAFG00000012919	-	88	88.000	ENSETEG00000003888	LSG1	89	88.000	Echinops_telfairi
ENSLAFG00000012919	-	88	56.803	ENSEBUG00000003119	lsg1	85	56.610	Eptatretus_burgeri
ENSLAFG00000012919	-	100	83.460	ENSEASG00005000678	LSG1	100	83.460	Equus_asinus_asinus
ENSLAFG00000012919	-	100	83.308	ENSECAG00000017659	LSG1	100	83.308	Equus_caballus
ENSLAFG00000012919	-	87	78.448	ENSEEUG00000015217	LSG1	87	78.448	Erinaceus_europaeus
ENSLAFG00000012919	-	99	61.787	ENSELUG00000023973	lsg1	99	61.941	Esox_lucius
ENSLAFG00000012919	-	99	83.131	ENSFCAG00000024957	LSG1	99	83.131	Felis_catus
ENSLAFG00000012919	-	92	64.668	ENSFALG00000007210	LSG1	94	64.668	Ficedula_albicollis
ENSLAFG00000012919	-	100	78.483	ENSFDAG00000017373	LSG1	100	78.483	Fukomys_damarensis
ENSLAFG00000012919	-	97	65.306	ENSFHEG00000003680	lsg1	99	64.536	Fundulus_heteroclitus
ENSLAFG00000012919	-	84	71.193	ENSGMOG00000015834	lsg1	99	61.077	Gadus_morhua
ENSLAFG00000012919	-	99	63.389	ENSGALG00000007058	LSG1	87	64.199	Gallus_gallus
ENSLAFG00000012919	-	97	66.296	ENSGAFG00000015831	lsg1	99	66.254	Gambusia_affinis
ENSLAFG00000012919	-	98	63.067	ENSGACG00000009323	lsg1	99	62.270	Gasterosteus_aculeatus
ENSLAFG00000012919	-	100	83.915	ENSGGOG00000000520	LSG1	100	83.915	Gorilla_gorilla
ENSLAFG00000012919	-	99	64.286	ENSHBUG00000005659	lsg1	99	63.897	Haplochromis_burtoni
ENSLAFG00000012919	-	100	76.840	ENSHGLG00000017390	LSG1	100	76.994	Heterocephalus_glaber_female
ENSLAFG00000012919	-	100	76.687	ENSHGLG00100018587	LSG1	100	76.840	Heterocephalus_glaber_male
ENSLAFG00000012919	-	97	64.308	ENSHCOG00000016848	lsg1	99	63.804	Hippocampus_comes
ENSLAFG00000012919	-	99	64.815	ENSIPUG00000008631	lsg1	99	64.451	Ictalurus_punctatus
ENSLAFG00000012919	-	81	77.490	ENSSTOG00000010234	LSG1	99	79.283	Ictidomys_tridecemlineatus
ENSLAFG00000012919	-	100	79.199	ENSJJAG00000015513	Lsg1	100	79.199	Jaculus_jaculus
ENSLAFG00000012919	-	98	63.507	ENSKMAG00000009681	lsg1	99	63.003	Kryptolebias_marmoratus
ENSLAFG00000012919	-	98	62.362	ENSLBEG00000024261	lsg1	99	62.791	Labrus_bergylta
ENSLAFG00000012919	-	99	66.214	ENSLACG00000013399	LSG1	99	66.214	Latimeria_chalumnae
ENSLAFG00000012919	-	98	66.044	ENSLOCG00000004918	lsg1	99	66.055	Lepisosteus_oculatus
ENSLAFG00000012919	-	100	84.219	ENSMFAG00000039903	LSG1	100	82.853	Macaca_fascicularis
ENSLAFG00000012919	-	100	84.219	ENSMMUG00000010708	LSG1	100	84.219	Macaca_mulatta
ENSLAFG00000012919	-	100	84.067	ENSMNEG00000031538	LSG1	100	82.701	Macaca_nemestrina
ENSLAFG00000012919	-	100	84.067	ENSMLEG00000041184	LSG1	100	84.067	Mandrillus_leucophaeus
ENSLAFG00000012919	-	99	62.673	ENSMAMG00000000470	lsg1	99	62.673	Mastacembelus_armatus
ENSLAFG00000012919	-	99	64.438	ENSMZEG00005017865	lsg1	99	64.048	Maylandia_zebra
ENSLAFG00000012919	-	89	64.716	ENSMGAG00000007050	LSG1	99	65.986	Meleagris_gallopavo
ENSLAFG00000012919	-	93	79.305	ENSMAUG00000016976	Lsg1	94	79.801	Mesocricetus_auratus
ENSLAFG00000012919	-	100	83.232	ENSMICG00000049087	LSG1	100	83.232	Microcebus_murinus
ENSLAFG00000012919	-	100	79.389	ENSMOCG00000022136	Lsg1	100	79.237	Microtus_ochrogaster
ENSLAFG00000012919	-	84	72.667	ENSMMOG00000008884	lsg1	99	62.326	Mola_mola
ENSLAFG00000012919	-	99	58.652	ENSMODG00000019828	LSG1	99	58.626	Monodelphis_domestica
ENSLAFG00000012919	-	100	80.989	MGP_CAROLIEiJ_G0020648	Lsg1	100	80.989	Mus_caroli
ENSLAFG00000012919	-	100	81.269	ENSMUSG00000022538	Lsg1	100	81.269	Mus_musculus
ENSLAFG00000012919	-	98	81.847	MGP_PahariEiJ_G0016352	Lsg1	100	81.385	Mus_pahari
ENSLAFG00000012919	-	100	81.269	MGP_SPRETEiJ_G0021544	Lsg1	100	81.298	Mus_spretus
ENSLAFG00000012919	-	99	81.611	ENSMPUG00000003734	LSG1	99	81.611	Mustela_putorius_furo
ENSLAFG00000012919	-	99	84.509	ENSMLUG00000012548	LSG1	99	84.509	Myotis_lucifugus
ENSLAFG00000012919	-	100	80.982	ENSNGAG00000021872	Lsg1	100	80.982	Nannospalax_galili
ENSLAFG00000012919	-	100	83.915	ENSNLEG00000008293	LSG1	100	83.915	Nomascus_leucogenys
ENSLAFG00000012919	-	70	71.134	ENSMEUG00000009041	-	82	71.134	Notamacropus_eugenii
ENSLAFG00000012919	-	99	63.952	ENSONIG00000002635	lsg1	99	64.404	Oreochromis_niloticus
ENSLAFG00000012919	-	95	72.727	ENSOANG00000012742	LSG1	99	72.625	Ornithorhynchus_anatinus
ENSLAFG00000012919	-	100	82.836	ENSOCUG00000004817	LSG1	100	83.763	Oryctolagus_cuniculus
ENSLAFG00000012919	-	98	64.873	ENSORLG00000007695	lsg1	99	64.496	Oryzias_latipes
ENSLAFG00000012919	-	98	64.929	ENSORLG00020016286	lsg1	99	63.553	Oryzias_latipes_hni
ENSLAFG00000012919	-	98	64.557	ENSORLG00015012025	lsg1	99	64.341	Oryzias_latipes_hsok
ENSLAFG00000012919	-	98	64.139	ENSOMEG00000022379	lsg1	99	64.043	Oryzias_melastigma
ENSLAFG00000012919	-	100	83.560	ENSOGAG00000003475	LSG1	100	83.560	Otolemur_garnettii
ENSLAFG00000012919	-	99	79.786	ENSOARG00000020403	LSG1	99	80.245	Ovis_aries
ENSLAFG00000012919	-	100	83.460	ENSPPAG00000029271	LSG1	100	83.460	Pan_paniscus
ENSLAFG00000012919	-	99	83.109	ENSPPRG00000010281	LSG1	99	83.109	Panthera_pardus
ENSLAFG00000012919	-	99	82.979	ENSPTIG00000010789	LSG1	99	82.979	Panthera_tigris_altaica
ENSLAFG00000012919	-	100	83.308	ENSPTRG00000015760	LSG1	100	83.308	Pan_troglodytes
ENSLAFG00000012919	-	100	83.915	ENSPANG00000018249	LSG1	100	82.549	Papio_anubis
ENSLAFG00000012919	-	100	63.247	ENSPKIG00000002895	lsg1	100	64.625	Paramormyrops_kingsleyae
ENSLAFG00000012919	-	96	64.577	ENSPSIG00000009821	LSG1	99	63.636	Pelodiscus_sinensis
ENSLAFG00000012919	-	95	65.806	ENSPMGG00000000931	lsg1	99	65.329	Periophthalmus_magnuspinnatus
ENSLAFG00000012919	-	100	80.305	ENSPEMG00000012082	-	100	79.847	Peromyscus_maniculatus_bairdii
ENSLAFG00000012919	-	99	59.471	ENSPMAG00000007451	lsg1	99	59.407	Petromyzon_marinus
ENSLAFG00000012919	-	99	66.845	ENSPCIG00000013890	LSG1	81	66.845	Phascolarctos_cinereus
ENSLAFG00000012919	-	97	66.875	ENSPFOG00000021882	lsg1	99	66.667	Poecilia_formosa
ENSLAFG00000012919	-	97	66.301	ENSPLAG00000019536	lsg1	99	66.361	Poecilia_latipinna
ENSLAFG00000012919	-	97	66.044	ENSPMEG00000017281	lsg1	99	65.854	Poecilia_mexicana
ENSLAFG00000012919	-	97	56.000	ENSPREG00000006048	lsg1	99	56.024	Poecilia_reticulata
ENSLAFG00000012919	-	92	82.566	ENSPPYG00000014425	LSG1	100	82.566	Pongo_abelii
ENSLAFG00000012919	-	90	89.333	ENSPCAG00000005511	LSG1	90	89.333	Procavia_capensis
ENSLAFG00000012919	-	100	84.067	ENSPCOG00000012360	LSG1	100	84.067	Propithecus_coquereli
ENSLAFG00000012919	-	99	64.091	ENSPNYG00000021994	lsg1	99	63.705	Pundamilia_nyererei
ENSLAFG00000012919	-	99	64.643	ENSPNAG00000015533	lsg1	99	64.536	Pygocentrus_nattereri
ENSLAFG00000012919	-	100	81.250	ENSRNOG00000001727	Lsg1	100	81.250	Rattus_norvegicus
ENSLAFG00000012919	-	100	82.701	ENSRBIG00000029053	LSG1	100	82.701	Rhinopithecus_bieti
ENSLAFG00000012919	-	100	82.701	ENSRROG00000037702	LSG1	100	82.701	Rhinopithecus_roxellana
ENSLAFG00000012919	-	68	57.485	YGL099W	LSG1	68	57.485	Saccharomyces_cerevisiae
ENSLAFG00000012919	-	100	84.522	ENSSBOG00000034938	LSG1	100	84.522	Saimiri_boliviensis_boliviensis
ENSLAFG00000012919	-	78	66.221	ENSSHAG00000003487	LSG1	99	65.517	Sarcophilus_harrisii
ENSLAFG00000012919	-	98	63.679	ENSSFOG00015008955	lsg1	99	63.150	Scleropages_formosus
ENSLAFG00000012919	-	98	65.000	ENSSDUG00000004622	lsg1	99	63.775	Seriola_dumerili
ENSLAFG00000012919	-	98	64.623	ENSSLDG00000010869	lsg1	99	64.031	Seriola_lalandi_dorsalis
ENSLAFG00000012919	-	82	78.592	ENSSARG00000012981	LSG1	84	78.830	Sorex_araneus
ENSLAFG00000012919	-	99	67.674	ENSSPUG00000016347	LSG1	99	67.372	Sphenodon_punctatus
ENSLAFG00000012919	-	99	63.567	ENSSPAG00000005508	lsg1	99	64.660	Stegastes_partitus
ENSLAFG00000012919	-	99	82.716	ENSSSCG00000011827	LSG1	99	82.099	Sus_scrofa
ENSLAFG00000012919	-	89	64.500	ENSTGUG00000009068	LSG1	99	64.500	Taeniopygia_guttata
ENSLAFG00000012919	-	97	62.758	ENSTRUG00000017380	lsg1	99	61.043	Takifugu_rubripes
ENSLAFG00000012919	-	97	66.088	ENSTNIG00000015570	lsg1	99	65.538	Tetraodon_nigroviridis
ENSLAFG00000012919	-	99	75.651	ENSTTRG00000000559	LSG1	99	74.885	Tursiops_truncatus
ENSLAFG00000012919	-	99	82.219	ENSUAMG00000012454	LSG1	99	82.219	Ursus_americanus
ENSLAFG00000012919	-	99	82.219	ENSUMAG00000000855	LSG1	99	82.219	Ursus_maritimus
ENSLAFG00000012919	-	95	76.960	ENSVPAG00000012400	LSG1	99	76.960	Vicugna_pacos
ENSLAFG00000012919	-	95	82.400	ENSVVUG00000008956	LSG1	97	82.400	Vulpes_vulpes
ENSLAFG00000012919	-	99	65.507	ENSXETG00000003451	lsg1	99	65.758	Xenopus_tropicalis
ENSLAFG00000012919	-	97	66.667	ENSXCOG00000003239	lsg1	99	65.954	Xiphophorus_couchianus
ENSLAFG00000012919	-	97	65.561	ENSXMAG00000005536	lsg1	99	64.715	Xiphophorus_maculatus