EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000012933 (Gene tree)
Gene ID: -
Gene Symbol: SLBP
Alias: HBP
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 10922 bases
Position: chrscaffold_18:3786287-3797208
Accession: 10904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000020217	SLBP_RNA_bind	PF15247.6	3e-29	1	1
ENSLAFP00000010814	SLBP_RNA_bind	PF15247.6	3.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000012933	SLBP-202	726	-	ENSLAFP00000010814	242 (aa)	-	G3TAD4
ENSLAFT00000031079	SLBP-201	702	-	ENSLAFP00000020217	234 (aa)	-	G3TXA9

Gene Model

Click here to download ENSLAFG00000012933's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000012933's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000012933	SLBP	100	80.658	ENSG00000163950	SLBP	68	95.541	Homo_sapiens
ENSLAFG00000012933	SLBP	83	56.132	ENSAPOG00000004953	slbp	72	57.282	Acanthochromis_polyacanthus
ENSLAFG00000012933	SLBP	74	93.855	ENSAMEG00000016915	SLBP	82	94.382	Ailuropoda_melanoleuca
ENSLAFG00000012933	SLBP	90	54.978	ENSACIG00000022308	slbp	78	59.606	Amphilophus_citrinellus
ENSLAFG00000012933	SLBP	83	57.075	ENSAOCG00000024545	slbp	72	58.252	Amphiprion_ocellaris
ENSLAFG00000012933	SLBP	83	57.075	ENSAPEG00000017629	slbp	72	58.252	Amphiprion_percula
ENSLAFG00000012933	SLBP	83	58.333	ENSATEG00000016358	slbp	72	59.615	Anabas_testudineus
ENSLAFG00000012933	SLBP	76	76.796	ENSAPLG00000015989	-	72	83.750	Anas_platyrhynchos
ENSLAFG00000012933	SLBP	100	77.600	ENSANAG00000034769	SLBP	68	94.268	Aotus_nancymaae
ENSLAFG00000012933	SLBP	83	55.450	ENSACLG00000007036	-	77	52.336	Astatotilapia_calliptera
ENSLAFG00000012933	SLBP	83	62.562	ENSAMXG00000014527	slbp	74	64.000	Astyanax_mexicanus
ENSLAFG00000012933	SLBP	99	84.120	ENSBTAG00000001328	SLBP	85	84.120	Bos_taurus
ENSLAFG00000012933	SLBP	100	76.000	ENSCJAG00000001790	SLBP	80	78.947	Callithrix_jacchus
ENSLAFG00000012933	SLBP	93	83.186	ENSCAFG00000015016	SLBP	79	82.883	Canis_familiaris
ENSLAFG00000012933	SLBP	93	83.186	ENSCAFG00020012334	SLBP	79	82.883	Canis_lupus_dingo
ENSLAFG00000012933	SLBP	99	84.120	ENSCHIG00000019364	SLBP	85	84.120	Capra_hircus
ENSLAFG00000012933	SLBP	100	81.893	ENSTSYG00000000376	SLBP	70	94.410	Carlito_syrichta
ENSLAFG00000012933	SLBP	61	88.732	ENSCAPG00000016340	SLBP	78	88.732	Cavia_aperea
ENSLAFG00000012933	SLBP	100	80.672	ENSCPOG00000000031	SLBP	86	81.301	Cavia_porcellus
ENSLAFG00000012933	SLBP	100	80.247	ENSCATG00000029173	SLBP	68	94.904	Cercocebus_atys
ENSLAFG00000012933	SLBP	100	81.624	ENSCLAG00000008157	SLBP	85	81.743	Chinchilla_lanigera
ENSLAFG00000012933	SLBP	100	66.129	ENSCSAG00000015628	SLBP	80	67.699	Chlorocebus_sabaeus
ENSLAFG00000012933	SLBP	100	73.663	ENSCPBG00000000746	SLBP	78	76.471	Chrysemys_picta_bellii
ENSLAFG00000012933	SLBP	76	89.831	ENSCANG00000041008	SLBP	74	94.231	Colobus_angolensis_palliatus
ENSLAFG00000012933	SLBP	100	83.951	ENSCGRG00001012991	-	86	83.951	Cricetulus_griseus_chok1gshd
ENSLAFG00000012933	SLBP	100	85.185	ENSCGRG00001009760	-	85	86.266	Cricetulus_griseus_chok1gshd
ENSLAFG00000012933	SLBP	100	85.185	ENSCGRG00000004506	Slbp	85	86.266	Cricetulus_griseus_crigri
ENSLAFG00000012933	SLBP	82	58.937	ENSCSEG00000020337	-	72	60.199	Cynoglossus_semilaevis
ENSLAFG00000012933	SLBP	83	55.924	ENSCVAG00000019592	-	75	55.721	Cyprinodon_variegatus
ENSLAFG00000012933	SLBP	90	60.538	ENSDARG00000100558	slbp	66	62.814	Danio_rerio
ENSLAFG00000012933	SLBP	92	83.111	ENSDNOG00000047539	SLBP	79	82.960	Dasypus_novemcinctus
ENSLAFG00000012933	SLBP	76	93.220	ENSDORG00000003028	Slbp	93	93.377	Dipodomys_ordii
ENSLAFG00000012933	SLBP	99	82.158	ENSETEG00000004641	SLBP	99	82.305	Echinops_telfairi
ENSLAFG00000012933	SLBP	65	95.425	ENSEASG00005022714	SLBP	80	95.425	Equus_asinus_asinus
ENSLAFG00000012933	SLBP	89	84.722	ENSECAG00000011689	SLBP	69	84.762	Equus_caballus
ENSLAFG00000012933	SLBP	83	58.252	ENSELUG00000012854	slbp	72	61.576	Esox_lucius
ENSLAFG00000012933	SLBP	100	83.475	ENSFCAG00000000169	SLBP	86	83.475	Felis_catus
ENSLAFG00000012933	SLBP	92	74.554	ENSFALG00000010003	-	78	71.041	Ficedula_albicollis
ENSLAFG00000012933	SLBP	91	87.793	ENSFDAG00000007592	SLBP	84	87.793	Fukomys_damarensis
ENSLAFG00000012933	SLBP	81	56.731	ENSFHEG00000007497	slbp	76	54.680	Fundulus_heteroclitus
ENSLAFG00000012933	SLBP	62	72.000	ENSGMOG00000015352	slbp	96	72.000	Gadus_morhua
ENSLAFG00000012933	SLBP	99	70.248	ENSGALG00000015712	SLBP	78	73.303	Gallus_gallus
ENSLAFG00000012933	SLBP	83	56.604	ENSGAFG00000019577	slbp	79	57.488	Gambusia_affinis
ENSLAFG00000012933	SLBP	83	55.769	ENSGACG00000019596	slbp	77	59.896	Gasterosteus_aculeatus
ENSLAFG00000012933	SLBP	100	72.840	ENSGAGG00000012096	SLBP	89	75.566	Gopherus_agassizii
ENSLAFG00000012933	SLBP	100	80.658	ENSGGOG00000003167	SLBP	68	95.541	Gorilla_gorilla
ENSLAFG00000012933	SLBP	83	55.140	ENSHBUG00000003338	-	77	52.336	Haplochromis_burtoni
ENSLAFG00000012933	SLBP	88	73.558	ENSHGLG00000008313	-	84	67.220	Heterocephalus_glaber_female
ENSLAFG00000012933	SLBP	100	69.915	ENSHGLG00000005955	-	100	68.981	Heterocephalus_glaber_female
ENSLAFG00000012933	SLBP	79	78.378	ENSHGLG00000010461	-	72	75.936	Heterocephalus_glaber_female
ENSLAFG00000012933	SLBP	79	78.378	ENSHGLG00100014906	-	80	76.812	Heterocephalus_glaber_male
ENSLAFG00000012933	SLBP	100	81.013	ENSHGLG00100014018	-	100	80.383	Heterocephalus_glaber_male
ENSLAFG00000012933	SLBP	88	74.519	ENSHGLG00100010510	-	80	72.093	Heterocephalus_glaber_male
ENSLAFG00000012933	SLBP	79	59.375	ENSHCOG00000013425	slbp	69	59.788	Hippocampus_comes
ENSLAFG00000012933	SLBP	82	62.500	ENSIPUG00000016780	slbp	73	63.918	Ictalurus_punctatus
ENSLAFG00000012933	SLBP	100	84.774	ENSSTOG00000003262	SLBP	86	84.774	Ictidomys_tridecemlineatus
ENSLAFG00000012933	SLBP	100	83.128	ENSJJAG00000020549	-	86	83.128	Jaculus_jaculus
ENSLAFG00000012933	SLBP	93	83.260	ENSJJAG00000002394	-	79	82.883	Jaculus_jaculus
ENSLAFG00000012933	SLBP	83	56.279	ENSKMAG00000008187	slbp	76	55.814	Kryptolebias_marmoratus
ENSLAFG00000012933	SLBP	84	59.434	ENSLBEG00000024709	slbp	73	57.561	Labrus_bergylta
ENSLAFG00000012933	SLBP	86	61.502	ENSLACG00000014623	SLBP	71	63.500	Latimeria_chalumnae
ENSLAFG00000012933	SLBP	90	57.965	ENSLOCG00000011027	slbp	68	59.606	Lepisosteus_oculatus
ENSLAFG00000012933	SLBP	90	84.906	ENSMFAG00000030130	SLBP	63	87.179	Macaca_fascicularis
ENSLAFG00000012933	SLBP	95	78.151	ENSMMUG00000032303	SLBP	71	94.904	Macaca_mulatta
ENSLAFG00000012933	SLBP	69	76.437	ENSMNEG00000008082	SLBP	74	76.437	Macaca_nemestrina
ENSLAFG00000012933	SLBP	76	90.449	ENSMLEG00000024639	SLBP	64	94.904	Mandrillus_leucophaeus
ENSLAFG00000012933	SLBP	85	55.708	ENSMAMG00000001046	-	74	56.459	Mastacembelus_armatus
ENSLAFG00000012933	SLBP	83	55.140	ENSMZEG00005017261	-	77	52.336	Maylandia_zebra
ENSLAFG00000012933	SLBP	76	80.337	ENSMGAG00000013085	SLBP	72	84.076	Meleagris_gallopavo
ENSLAFG00000012933	SLBP	100	84.774	ENSMAUG00000009490	Slbp	86	84.774	Mesocricetus_auratus
ENSLAFG00000012933	SLBP	100	81.481	ENSMICG00000014244	SLBP	80	84.163	Microcebus_murinus
ENSLAFG00000012933	SLBP	100	85.185	ENSMOCG00000015826	Slbp	98	84.259	Microtus_ochrogaster
ENSLAFG00000012933	SLBP	81	56.000	ENSMMOG00000010181	slbp	82	56.995	Mola_mola
ENSLAFG00000012933	SLBP	92	81.614	ENSMODG00000004304	SLBP	85	81.614	Monodelphis_domestica
ENSLAFG00000012933	SLBP	82	57.075	ENSMALG00000013883	-	53	58.738	Monopterus_albus
ENSLAFG00000012933	SLBP	99	85.837	MGP_CAROLIEiJ_G0027117	Slbp	95	84.362	Mus_caroli
ENSLAFG00000012933	SLBP	99	85.837	ENSMUSG00000004642	Slbp	95	84.541	Mus_musculus
ENSLAFG00000012933	SLBP	99	85.837	MGP_PahariEiJ_G0016901	Slbp	95	84.362	Mus_pahari
ENSLAFG00000012933	SLBP	99	85.837	MGP_SPRETEiJ_G0028113	Slbp	95	84.541	Mus_spretus
ENSLAFG00000012933	SLBP	62	92.414	ENSMPUG00000011139	SLBP	75	91.781	Mustela_putorius_furo
ENSLAFG00000012933	SLBP	76	89.326	ENSMLUG00000004425	SLBP	76	89.326	Myotis_lucifugus
ENSLAFG00000012933	SLBP	99	83.333	ENSNGAG00000020799	Slbp	86	82.627	Nannospalax_galili
ENSLAFG00000012933	SLBP	83	56.190	ENSNBRG00000006044	-	87	51.739	Neolamprologus_brichardi
ENSLAFG00000012933	SLBP	100	78.400	ENSNLEG00000000048	SLBP	68	95.541	Nomascus_leucogenys
ENSLAFG00000012933	SLBP	76	88.136	ENSMEUG00000002501	SLBP	100	87.640	Notamacropus_eugenii
ENSLAFG00000012933	SLBP	99	81.897	ENSODEG00000012641	SLBP	84	82.251	Octodon_degus
ENSLAFG00000012933	SLBP	83	55.963	ENSONIG00000017469	-	77	52.968	Oreochromis_niloticus
ENSLAFG00000012933	SLBP	77	87.778	ENSOANG00000014243	SLBP	69	92.405	Ornithorhynchus_anatinus
ENSLAFG00000012933	SLBP	83	57.488	ENSORLG00000024887	-	72	55.385	Oryzias_latipes
ENSLAFG00000012933	SLBP	82	57.789	ENSORLG00020007798	slbp	72	55.440	Oryzias_latipes_hni
ENSLAFG00000012933	SLBP	83	57.005	ENSORLG00015016656	slbp	72	55.440	Oryzias_latipes_hsok
ENSLAFG00000012933	SLBP	83	57.005	ENSOMEG00000010818	slbp	72	58.247	Oryzias_melastigma
ENSLAFG00000012933	SLBP	99	82.479	ENSOGAG00000009750	SLBP	80	84.186	Otolemur_garnettii
ENSLAFG00000012933	SLBP	76	94.944	ENSOARG00000016090	SLBP	82	94.944	Ovis_aries
ENSLAFG00000012933	SLBP	100	81.070	ENSPPAG00000033300	SLBP	80	83.710	Pan_paniscus
ENSLAFG00000012933	SLBP	89	89.100	ENSPPRG00000016897	SLBP	84	89.100	Panthera_pardus
ENSLAFG00000012933	SLBP	65	93.464	ENSPTIG00000015057	SLBP	80	93.464	Panthera_tigris_altaica
ENSLAFG00000012933	SLBP	100	81.070	ENSPTRG00000015832	SLBP	80	83.710	Pan_troglodytes
ENSLAFG00000012933	SLBP	99	76.033	ENSPANG00000004932	SLBP	68	94.904	Papio_anubis
ENSLAFG00000012933	SLBP	88	57.746	ENSPKIG00000006183	slbp	69	60.914	Paramormyrops_kingsleyae
ENSLAFG00000012933	SLBP	78	55.612	ENSPMGG00000017684	-	88	59.659	Periophthalmus_magnuspinnatus
ENSLAFG00000012933	SLBP	100	85.185	ENSPEMG00000018369	Slbp	86	85.185	Peromyscus_maniculatus_bairdii
ENSLAFG00000012933	SLBP	99	75.781	ENSPCIG00000013575	SLBP	74	75.781	Phascolarctos_cinereus
ENSLAFG00000012933	SLBP	83	56.604	ENSPFOG00000000462	slbp	75	57.488	Poecilia_formosa
ENSLAFG00000012933	SLBP	83	56.604	ENSPLAG00000008300	slbp	79	54.976	Poecilia_latipinna
ENSLAFG00000012933	SLBP	83	56.604	ENSPMEG00000020807	slbp	75	57.488	Poecilia_mexicana
ENSLAFG00000012933	SLBP	83	56.604	ENSPREG00000004561	slbp	75	57.488	Poecilia_reticulata
ENSLAFG00000012933	SLBP	100	81.070	ENSPPYG00000014529	SLBP	80	83.710	Pongo_abelii
ENSLAFG00000012933	SLBP	100	81.481	ENSPCOG00000017399	SLBP	80	84.163	Propithecus_coquereli
ENSLAFG00000012933	SLBP	100	75.720	ENSPVAG00000002807	SLBP	85	75.720	Pteropus_vampyrus
ENSLAFG00000012933	SLBP	83	55.140	ENSPNYG00000005451	-	77	52.336	Pundamilia_nyererei
ENSLAFG00000012933	SLBP	90	57.709	ENSPNAG00000018503	slbp	75	62.814	Pygocentrus_nattereri
ENSLAFG00000012933	SLBP	100	83.951	ENSRNOG00000037162	Slbp	85	84.979	Rattus_norvegicus
ENSLAFG00000012933	SLBP	100	80.247	ENSRBIG00000039159	SLBP	68	94.904	Rhinopithecus_bieti
ENSLAFG00000012933	SLBP	93	83.636	ENSRROG00000030081	SLBP	75	86.432	Rhinopithecus_roxellana
ENSLAFG00000012933	SLBP	65	90.196	ENSSBOG00000033897	SLBP	71	95.455	Saimiri_boliviensis_boliviensis
ENSLAFG00000012933	SLBP	99	74.903	ENSSHAG00000013939	SLBP	87	74.903	Sarcophilus_harrisii
ENSLAFG00000012933	SLBP	90	61.086	ENSSFOG00015019429	slbp	70	63.402	Scleropages_formosus
ENSLAFG00000012933	SLBP	83	53.052	ENSSMAG00000016028	-	72	54.589	Scophthalmus_maximus
ENSLAFG00000012933	SLBP	92	53.419	ENSSDUG00000000855	-	79	55.066	Seriola_dumerili
ENSLAFG00000012933	SLBP	83	40.000	ENSSLDG00000007554	-	62	39.801	Seriola_lalandi_dorsalis
ENSLAFG00000012933	SLBP	59	53.020	ENSSLDG00000022893	-	85	53.793	Seriola_lalandi_dorsalis
ENSLAFG00000012933	SLBP	90	72.300	ENSSPUG00000016007	SLBP	73	74.742	Sphenodon_punctatus
ENSLAFG00000012933	SLBP	83	57.619	ENSSPAG00000004021	slbp	79	58.824	Stegastes_partitus
ENSLAFG00000012933	SLBP	100	80.085	ENSSSCG00000008676	SLBP	86	80.085	Sus_scrofa
ENSLAFG00000012933	SLBP	92	69.643	ENSTGUG00000010626	-	77	72.816	Taeniopygia_guttata
ENSLAFG00000012933	SLBP	89	53.648	ENSTRUG00000000688	slbp	80	51.965	Takifugu_rubripes
ENSLAFG00000012933	SLBP	82	53.333	ENSTNIG00000000484	-	81	51.456	Tetraodon_nigroviridis
ENSLAFG00000012933	SLBP	91	60.000	ENSTBEG00000004085	SLBP	85	60.000	Tupaia_belangeri
ENSLAFG00000012933	SLBP	76	87.571	ENSTTRG00000004010	-	100	87.079	Tursiops_truncatus
ENSLAFG00000012933	SLBP	76	94.350	ENSTTRG00000010901	-	82	94.350	Tursiops_truncatus
ENSLAFG00000012933	SLBP	100	82.449	ENSUAMG00000012990	SLBP	86	82.449	Ursus_americanus
ENSLAFG00000012933	SLBP	65	94.118	ENSUMAG00000006119	SLBP	85	93.506	Ursus_maritimus
ENSLAFG00000012933	SLBP	93	84.000	ENSVVUG00000015578	-	79	81.982	Vulpes_vulpes
ENSLAFG00000012933	SLBP	92	59.375	ENSXETG00000003876	slbp	79	66.337	Xenopus_tropicalis
ENSLAFG00000012933	SLBP	81	56.604	ENSXCOG00000008275	slbp	79	57.416	Xiphophorus_couchianus
ENSLAFG00000012933	SLBP	81	56.667	ENSXMAG00000001331	-	74	57.488	Xiphophorus_maculatus