EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000012981 (Gene tree)
Gene ID: -
Gene Symbol: PPARGC1A
Alias: PGC-1alpha|PGC1|PGC1A|PPARGC1
Full Name: PPARG coactivator 1 alpha
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 114470 bases
Position: chrscaffold_18:23984799-24099268
Accession: 100654985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000019817	RRM_1	PF00076.22	3.5e-07	1	1
ENSLAFP00000010853	RRM_1	PF00076.22	3.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000012981	PPARGC1A-202	2388	-	ENSLAFP00000010853	796 (aa)	XP_003411338	G3TAG2
ENSLAFT00000036448	PPARGC1A-201	2211	-	ENSLAFP00000019817	736 (aa)	-	G3TW59

Gene Model

Click here to download ENSLAFG00000012981's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000012981's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000012981	PPARGC1A	100	95.113	ENSG00000109819	PPARGC1A	100	95.113	Homo_sapiens
ENSLAFG00000012981	PPARGC1A	71	80.000	ENSAPOG00000018632	ppargc1a	100	55.662	Acanthochromis_polyacanthus
ENSLAFG00000012981	PPARGC1A	100	94.724	ENSAMEG00000010421	PPARGC1A	100	94.724	Ailuropoda_melanoleuca
ENSLAFG00000012981	PPARGC1A	71	80.526	ENSAOCG00000006754	ppargc1a	100	55.609	Amphiprion_ocellaris
ENSLAFG00000012981	PPARGC1A	89	71.983	ENSATEG00000016702	ppargc1a	100	55.924	Anabas_testudineus
ENSLAFG00000012981	PPARGC1A	100	88.317	ENSAPLG00000005303	PPARGC1A	100	88.317	Anas_platyrhynchos
ENSLAFG00000012981	PPARGC1A	93	37.321	ENSACAG00000015737	PPARGC1B	52	50.000	Anolis_carolinensis
ENSLAFG00000012981	PPARGC1A	100	82.456	ENSACAG00000000741	PPARGC1A	100	82.456	Anolis_carolinensis
ENSLAFG00000012981	PPARGC1A	100	94.987	ENSANAG00000035930	PPARGC1A	100	94.987	Aotus_nancymaae
ENSLAFG00000012981	PPARGC1A	88	74.747	ENSACLG00000001002	ppargc1a	86	69.869	Astatotilapia_calliptera
ENSLAFG00000012981	PPARGC1A	96	69.565	ENSAMXG00000002461	ppargc1a	99	55.597	Astyanax_mexicanus
ENSLAFG00000012981	PPARGC1A	100	92.597	ENSBTAG00000017024	PPARGC1A	100	93.350	Bos_taurus
ENSLAFG00000012981	PPARGC1A	100	94.612	ENSCJAG00000013024	PPARGC1A	100	94.612	Callithrix_jacchus
ENSLAFG00000012981	PPARGC1A	100	94.975	ENSCAFG00000016519	PPARGC1A	100	94.975	Canis_familiaris
ENSLAFG00000012981	PPARGC1A	100	93.071	ENSCAFG00020027242	PPARGC1A	99	94.819	Canis_lupus_dingo
ENSLAFG00000012981	PPARGC1A	100	93.476	ENSCHIG00000015991	PPARGC1A	100	93.476	Capra_hircus
ENSLAFG00000012981	PPARGC1A	66	48.855	ENSTSYG00000034354	PPARGC1B	53	48.855	Carlito_syrichta
ENSLAFG00000012981	PPARGC1A	100	95.614	ENSTSYG00000010439	PPARGC1A	100	95.614	Carlito_syrichta
ENSLAFG00000012981	PPARGC1A	100	88.043	ENSCAPG00000005150	PPARGC1A	96	89.987	Cavia_aperea
ENSLAFG00000012981	PPARGC1A	100	93.593	ENSCPOG00000001518	PPARGC1A	100	93.593	Cavia_porcellus
ENSLAFG00000012981	PPARGC1A	55	48.872	ENSCPOG00000001958	PPARGC1B	51	48.872	Cavia_porcellus
ENSLAFG00000012981	PPARGC1A	100	94.486	ENSCCAG00000024681	PPARGC1A	100	94.486	Cebus_capucinus
ENSLAFG00000012981	PPARGC1A	100	94.987	ENSCATG00000032575	PPARGC1A	100	94.987	Cercocebus_atys
ENSLAFG00000012981	PPARGC1A	100	93.719	ENSCLAG00000002058	PPARGC1A	100	93.719	Chinchilla_lanigera
ENSLAFG00000012981	PPARGC1A	100	94.987	ENSCSAG00000016575	PPARGC1A	100	94.987	Chlorocebus_sabaeus
ENSLAFG00000012981	PPARGC1A	81	43.158	ENSCPBG00000007891	PPARGC1B	56	50.746	Chrysemys_picta_bellii
ENSLAFG00000012981	PPARGC1A	100	94.862	ENSCANG00000033426	PPARGC1A	100	94.862	Colobus_angolensis_palliatus
ENSLAFG00000012981	PPARGC1A	100	91.834	ENSCGRG00001015534	Ppargc1a	100	91.834	Cricetulus_griseus_chok1gshd
ENSLAFG00000012981	PPARGC1A	55	51.064	ENSCGRG00001017949	Ppargc1b	51	49.635	Cricetulus_griseus_chok1gshd
ENSLAFG00000012981	PPARGC1A	100	91.834	ENSCGRG00000000200	Ppargc1a	100	91.834	Cricetulus_griseus_crigri
ENSLAFG00000012981	PPARGC1A	55	51.064	ENSCGRG00000008387	Ppargc1b	52	49.635	Cricetulus_griseus_crigri
ENSLAFG00000012981	PPARGC1A	91	76.410	ENSCSEG00000006884	ppargc1a	85	74.429	Cynoglossus_semilaevis
ENSLAFG00000012981	PPARGC1A	76	46.880	ENSCVAG00000016547	ppargc1a	100	48.112	Cyprinodon_variegatus
ENSLAFG00000012981	PPARGC1A	100	94.975	ENSDNOG00000041106	PPARGC1A	100	94.975	Dasypus_novemcinctus
ENSLAFG00000012981	PPARGC1A	100	91.440	ENSDORG00000016276	Ppargc1a	98	93.095	Dipodomys_ordii
ENSLAFG00000012981	PPARGC1A	100	95.352	ENSEASG00005007984	PPARGC1A	100	95.352	Equus_asinus_asinus
ENSLAFG00000012981	PPARGC1A	100	93.750	ENSECAG00000009164	PPARGC1A	97	95.262	Equus_caballus
ENSLAFG00000012981	PPARGC1A	100	90.231	ENSEEUG00000009219	PPARGC1A	100	92.190	Erinaceus_europaeus
ENSLAFG00000012981	PPARGC1A	69	76.699	ENSELUG00000017027	ppargc1a	100	51.674	Esox_lucius
ENSLAFG00000012981	PPARGC1A	100	94.975	ENSFCAG00000000043	PPARGC1A	100	94.975	Felis_catus
ENSLAFG00000012981	PPARGC1A	100	86.277	ENSFALG00000009211	PPARGC1A	99	87.708	Ficedula_albicollis
ENSLAFG00000012981	PPARGC1A	63	49.640	ENSFALG00000008858	PPARGC1B	58	49.640	Ficedula_albicollis
ENSLAFG00000012981	PPARGC1A	100	93.467	ENSFDAG00000005659	PPARGC1A	100	93.467	Fukomys_damarensis
ENSLAFG00000012981	PPARGC1A	55	49.618	ENSFDAG00000008719	PPARGC1B	53	49.618	Fukomys_damarensis
ENSLAFG00000012981	PPARGC1A	54	71.500	ENSFHEG00000021990	ppargc1a	100	53.253	Fundulus_heteroclitus
ENSLAFG00000012981	PPARGC1A	100	88.065	ENSGALG00000042851	PPARGC1A	100	88.065	Gallus_gallus
ENSLAFG00000012981	PPARGC1A	54	73.000	ENSGAFG00000015514	ppargc1a	71	70.539	Gambusia_affinis
ENSLAFG00000012981	PPARGC1A	100	83.967	ENSGAGG00000007043	PPARGC1A	100	85.379	Gopherus_agassizii
ENSLAFG00000012981	PPARGC1A	100	95.113	ENSGGOG00000009810	PPARGC1A	100	95.113	Gorilla_gorilla
ENSLAFG00000012981	PPARGC1A	87	81.818	ENSHBUG00000005269	ppargc1a	99	84.375	Haplochromis_burtoni
ENSLAFG00000012981	PPARGC1A	54	49.630	ENSHGLG00000005967	PPARGC1B	53	49.630	Heterocephalus_glaber_female
ENSLAFG00000012981	PPARGC1A	100	90.625	ENSHGLG00000007022	PPARGC1A	100	93.846	Heterocephalus_glaber_female
ENSLAFG00000012981	PPARGC1A	100	92.462	ENSHGLG00100000133	PPARGC1A	100	93.719	Heterocephalus_glaber_male
ENSLAFG00000012981	PPARGC1A	94	73.516	ENSHCOG00000014886	ppargc1a	100	51.029	Hippocampus_comes
ENSLAFG00000012981	PPARGC1A	92	84.211	ENSIPUG00000020313	ppargc1a	70	84.211	Ictalurus_punctatus
ENSLAFG00000012981	PPARGC1A	100	93.467	ENSSTOG00000012522	PPARGC1A	100	93.467	Ictidomys_tridecemlineatus
ENSLAFG00000012981	PPARGC1A	52	73.973	ENSKMAG00000005390	ppargc1a	100	52.331	Kryptolebias_marmoratus
ENSLAFG00000012981	PPARGC1A	96	71.983	ENSLBEG00000019562	ppargc1a	84	74.886	Labrus_bergylta
ENSLAFG00000012981	PPARGC1A	100	71.214	ENSLACG00000014054	PPARGC1A	99	73.214	Latimeria_chalumnae
ENSLAFG00000012981	PPARGC1A	93	34.594	ENSLACG00000011232	PPARGC1B	54	45.122	Latimeria_chalumnae
ENSLAFG00000012981	PPARGC1A	61	42.857	ENSLOCG00000012195	ppargc1b	57	42.857	Lepisosteus_oculatus
ENSLAFG00000012981	PPARGC1A	100	94.486	ENSMFAG00000000534	PPARGC1A	100	94.486	Macaca_fascicularis
ENSLAFG00000012981	PPARGC1A	100	94.612	ENSMMUG00000001844	PPARGC1A	100	94.612	Macaca_mulatta
ENSLAFG00000012981	PPARGC1A	100	94.612	ENSMNEG00000028682	PPARGC1A	100	94.612	Macaca_nemestrina
ENSLAFG00000012981	PPARGC1A	100	94.987	ENSMLEG00000034233	PPARGC1A	100	94.987	Mandrillus_leucophaeus
ENSLAFG00000012981	PPARGC1A	96	72.414	ENSMAMG00000005531	ppargc1a	100	53.138	Mastacembelus_armatus
ENSLAFG00000012981	PPARGC1A	89	74.747	ENSMZEG00005001739	ppargc1a	69	74.429	Maylandia_zebra
ENSLAFG00000012981	PPARGC1A	61	44.444	ENSMGAG00000003134	PPARGC1B	50	43.636	Meleagris_gallopavo
ENSLAFG00000012981	PPARGC1A	100	87.940	ENSMGAG00000012485	PPARGC1A	100	87.940	Meleagris_gallopavo
ENSLAFG00000012981	PPARGC1A	57	52.128	ENSMAUG00000014191	Ppargc1b	53	50.365	Mesocricetus_auratus
ENSLAFG00000012981	PPARGC1A	100	91.709	ENSMAUG00000011811	Ppargc1a	100	91.709	Mesocricetus_auratus
ENSLAFG00000012981	PPARGC1A	100	94.987	ENSMICG00000015390	PPARGC1A	100	94.987	Microcebus_murinus
ENSLAFG00000012981	PPARGC1A	67	47.445	ENSMOCG00000014885	Ppargc1b	52	47.445	Microtus_ochrogaster
ENSLAFG00000012981	PPARGC1A	100	91.332	ENSMOCG00000008765	Ppargc1a	100	91.332	Microtus_ochrogaster
ENSLAFG00000012981	PPARGC1A	88	80.702	ENSMMOG00000011847	ppargc1a	98	83.030	Mola_mola
ENSLAFG00000012981	PPARGC1A	100	90.327	ENSMODG00000000549	PPARGC1A	100	90.327	Monodelphis_domestica
ENSLAFG00000012981	PPARGC1A	93	72.414	ENSMALG00000004625	ppargc1a	92	72.414	Monopterus_albus
ENSLAFG00000012981	PPARGC1A	100	91.206	MGP_CAROLIEiJ_G0027213	Ppargc1a	100	91.206	Mus_caroli
ENSLAFG00000012981	PPARGC1A	100	91.343	ENSMUSG00000029167	Ppargc1a	100	91.343	Mus_musculus
ENSLAFG00000012981	PPARGC1A	100	91.080	MGP_PahariEiJ_G0016995	Ppargc1a	100	91.080	Mus_pahari
ENSLAFG00000012981	PPARGC1A	100	91.092	MGP_SPRETEiJ_G0028208	Ppargc1a	100	91.092	Mus_spretus
ENSLAFG00000012981	PPARGC1A	100	94.221	ENSMPUG00000016736	PPARGC1A	100	94.221	Mustela_putorius_furo
ENSLAFG00000012981	PPARGC1A	100	93.719	ENSMLUG00000016307	PPARGC1A	100	93.719	Myotis_lucifugus
ENSLAFG00000012981	PPARGC1A	100	92.085	ENSNGAG00000015090	Ppargc1a	100	92.085	Nannospalax_galili
ENSLAFG00000012981	PPARGC1A	54	50.000	ENSNLEG00000010193	PPARGC1B	51	48.921	Nomascus_leucogenys
ENSLAFG00000012981	PPARGC1A	100	93.641	ENSNLEG00000016760	PPARGC1A	100	94.784	Nomascus_leucogenys
ENSLAFG00000012981	PPARGC1A	100	91.960	ENSOPRG00000012899	PPARGC1A	100	91.960	Ochotona_princeps
ENSLAFG00000012981	PPARGC1A	66	50.382	ENSOPRG00000010017	PPARGC1B	52	50.382	Ochotona_princeps
ENSLAFG00000012981	PPARGC1A	62	49.630	ENSOANG00000009368	PPARGC1B	53	49.630	Ornithorhynchus_anatinus
ENSLAFG00000012981	PPARGC1A	100	88.442	ENSOANG00000006680	PPARGC1A	100	88.442	Ornithorhynchus_anatinus
ENSLAFG00000012981	PPARGC1A	100	92.588	ENSOCUG00000014668	PPARGC1A	100	92.588	Oryctolagus_cuniculus
ENSLAFG00000012981	PPARGC1A	67	45.324	ENSOCUG00000013833	PPARGC1B	53	45.324	Oryctolagus_cuniculus
ENSLAFG00000012981	PPARGC1A	90	77.895	ENSORLG00000004788	ppargc1a	100	55.753	Oryzias_latipes
ENSLAFG00000012981	PPARGC1A	91	73.399	ENSORLG00020014690	ppargc1a	100	54.884	Oryzias_latipes_hni
ENSLAFG00000012981	PPARGC1A	90	77.368	ENSORLG00015012206	ppargc1a	99	84.211	Oryzias_latipes_hsok
ENSLAFG00000012981	PPARGC1A	65	80.606	ENSOMEG00000000670	ppargc1a	100	53.964	Oryzias_melastigma
ENSLAFG00000012981	PPARGC1A	100	93.108	ENSOGAG00000014559	PPARGC1A	100	93.108	Otolemur_garnettii
ENSLAFG00000012981	PPARGC1A	100	93.601	ENSOARG00000005581	PPARGC1A	97	93.601	Ovis_aries
ENSLAFG00000012981	PPARGC1A	100	94.987	ENSPPAG00000034694	PPARGC1A	100	94.987	Pan_paniscus
ENSLAFG00000012981	PPARGC1A	100	94.724	ENSPPRG00000001711	PPARGC1A	100	94.724	Panthera_pardus
ENSLAFG00000012981	PPARGC1A	100	94.724	ENSPTIG00000007378	PPARGC1A	100	94.724	Panthera_tigris_altaica
ENSLAFG00000012981	PPARGC1A	100	95.113	ENSPTRG00000015954	PPARGC1A	100	95.113	Pan_troglodytes
ENSLAFG00000012981	PPARGC1A	100	93.992	ENSPANG00000005420	PPARGC1A	100	93.992	Papio_anubis
ENSLAFG00000012981	PPARGC1A	52	70.213	ENSPKIG00000002531	ppargc1a	71	63.675	Paramormyrops_kingsleyae
ENSLAFG00000012981	PPARGC1A	73	47.436	ENSPSIG00000008358	PPARGC1B	60	46.497	Pelodiscus_sinensis
ENSLAFG00000012981	PPARGC1A	100	87.437	ENSPSIG00000011790	PPARGC1A	100	87.437	Pelodiscus_sinensis
ENSLAFG00000012981	PPARGC1A	67	46.624	ENSPMGG00000019204	ppargc1a	100	49.776	Periophthalmus_magnuspinnatus
ENSLAFG00000012981	PPARGC1A	100	91.844	ENSPEMG00000010892	Ppargc1a	100	91.844	Peromyscus_maniculatus_bairdii
ENSLAFG00000012981	PPARGC1A	72	46.104	ENSPEMG00000018822	Ppargc1b	54	48.905	Peromyscus_maniculatus_bairdii
ENSLAFG00000012981	PPARGC1A	100	89.322	ENSPCIG00000015835	PPARGC1A	100	89.322	Phascolarctos_cinereus
ENSLAFG00000012981	PPARGC1A	54	73.000	ENSPFOG00000001263	ppargc1a	100	52.513	Poecilia_formosa
ENSLAFG00000012981	PPARGC1A	96	71.552	ENSPMEG00000000720	ppargc1a	100	51.238	Poecilia_mexicana
ENSLAFG00000012981	PPARGC1A	91	73.000	ENSPREG00000019171	ppargc1a	100	55.307	Poecilia_reticulata
ENSLAFG00000012981	PPARGC1A	100	95.238	ENSPPYG00000014640	PPARGC1A	100	95.238	Pongo_abelii
ENSLAFG00000012981	PPARGC1A	100	93.467	ENSPCAG00000016308	PPARGC1A	100	93.467	Procavia_capensis
ENSLAFG00000012981	PPARGC1A	100	94.987	ENSPCOG00000022858	PPARGC1A	100	94.987	Propithecus_coquereli
ENSLAFG00000012981	PPARGC1A	100	94.472	ENSPVAG00000004965	PPARGC1A	100	94.472	Pteropus_vampyrus
ENSLAFG00000012981	PPARGC1A	89	74.886	ENSPNYG00000006846	ppargc1a	100	54.556	Pundamilia_nyererei
ENSLAFG00000012981	PPARGC1A	96	70.000	ENSPNAG00000010393	ppargc1a	100	54.893	Pygocentrus_nattereri
ENSLAFG00000012981	PPARGC1A	100	91.709	ENSRNOG00000004473	Ppargc1a	100	91.709	Rattus_norvegicus
ENSLAFG00000012981	PPARGC1A	100	94.737	ENSRBIG00000032333	PPARGC1A	100	94.737	Rhinopithecus_bieti
ENSLAFG00000012981	PPARGC1A	100	94.862	ENSRROG00000010419	PPARGC1A	100	94.862	Rhinopithecus_roxellana
ENSLAFG00000012981	PPARGC1A	100	94.737	ENSSBOG00000006423	PPARGC1A	100	94.737	Saimiri_boliviensis_boliviensis
ENSLAFG00000012981	PPARGC1A	100	90.704	ENSSHAG00000010033	PPARGC1A	96	90.704	Sarcophilus_harrisii
ENSLAFG00000012981	PPARGC1A	53	68.610	ENSSFOG00015001633	ppargc1a	84	68.610	Scleropages_formosus
ENSLAFG00000012981	PPARGC1A	92	71.121	ENSSMAG00000011571	ppargc1a	100	57.042	Scophthalmus_maximus
ENSLAFG00000012981	PPARGC1A	100	53.268	ENSSLDG00000006987	ppargc1a	100	53.954	Seriola_lalandi_dorsalis
ENSLAFG00000012981	PPARGC1A	100	87.186	ENSSARG00000000575	PPARGC1A	100	87.186	Sorex_araneus
ENSLAFG00000012981	PPARGC1A	100	87.186	ENSSPUG00000013556	PPARGC1A	100	87.186	Sphenodon_punctatus
ENSLAFG00000012981	PPARGC1A	70	79.474	ENSSPAG00000023514	ppargc1a	70	70.306	Stegastes_partitus
ENSLAFG00000012981	PPARGC1A	100	93.216	ENSSSCG00000029275	PPARGC1A	100	93.216	Sus_scrofa
ENSLAFG00000012981	PPARGC1A	100	87.563	ENSTGUG00000009487	PPARGC1A	100	87.563	Taeniopygia_guttata
ENSLAFG00000012981	PPARGC1A	82	82.558	ENSTRUG00000007210	ppargc1a	92	49.112	Takifugu_rubripes
ENSLAFG00000012981	PPARGC1A	100	92.337	ENSTTRG00000005327	PPARGC1A	100	92.337	Tursiops_truncatus
ENSLAFG00000012981	PPARGC1A	66	53.435	ENSTTRG00000008430	PPARGC1B	52	53.435	Tursiops_truncatus
ENSLAFG00000012981	PPARGC1A	98	93.602	ENSUAMG00000020843	PPARGC1A	100	93.741	Ursus_americanus
ENSLAFG00000012981	PPARGC1A	100	92.799	ENSUMAG00000003557	PPARGC1A	99	94.615	Ursus_maritimus
ENSLAFG00000012981	PPARGC1A	98	93.056	ENSVPAG00000003478	PPARGC1A	90	93.056	Vicugna_pacos
ENSLAFG00000012981	PPARGC1A	100	94.849	ENSVVUG00000013365	PPARGC1A	100	94.849	Vulpes_vulpes
ENSLAFG00000012981	PPARGC1A	100	72.236	ENSXETG00000020468	ppargc1a	100	72.236	Xenopus_tropicalis
ENSLAFG00000012981	PPARGC1A	51	44.578	ENSXETG00000012711	ppargc1b	63	46.405	Xenopus_tropicalis
ENSLAFG00000012981	PPARGC1A	100	51.982	ENSXCOG00000004835	ppargc1a	95	78.788	Xiphophorus_couchianus
ENSLAFG00000012981	PPARGC1A	66	71.983	ENSXMAG00000007748	ppargc1a	71	70.954	Xiphophorus_maculatus