EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000013061 (Gene tree)
Gene ID: -
Gene Symbol: NCL
Alias: C23|Nsr1
Full Name: nucleolin
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 9555 bases
Position: chrscaffold_55:7642704-7652258
Accession: 7667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000010927	RRM_1	PF00076.22	8e-48	1	4
ENSLAFP00000010927	RRM_1	PF00076.22	8e-48	2	4
ENSLAFP00000010927	RRM_1	PF00076.22	8e-48	3	4
ENSLAFP00000010927	RRM_1	PF00076.22	8e-48	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000013063	NCL-201	2028	-	ENSLAFP00000010927	675 (aa)	-	G3TAL6

Gene Model

Click here to download ENSLAFG00000013061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000013061's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000013061	NCL	85	83.803	ENSG00000115053	NCL	89	84.921	Homo_sapiens
ENSLAFG00000013061	NCL	77	85.564	ENSAMEG00000016289	NCL	91	74.429	Ailuropoda_melanoleuca
ENSLAFG00000013061	NCL	77	85.564	ENSANAG00000035814	-	91	75.345	Aotus_nancymaae
ENSLAFG00000013061	NCL	99	62.838	ENSANAG00000024378	-	88	63.347	Aotus_nancymaae
ENSLAFG00000013061	NCL	88	83.505	ENSBTAG00000016174	NCL	91	72.576	Bos_taurus
ENSLAFG00000013061	NCL	91	74.390	ENSBTAG00000050728	-	92	74.180	Bos_taurus
ENSLAFG00000013061	NCL	84	76.056	ENSBTAG00000026909	-	90	74.895	Bos_taurus
ENSLAFG00000013061	NCL	66	75.728	ENSBTAG00000051320	-	84	73.272	Bos_taurus
ENSLAFG00000013061	NCL	91	73.212	ENSCAFG00000011037	NCL	91	74.504	Canis_familiaris
ENSLAFG00000013061	NCL	84	73.179	ENSCAFG00020023145	NCL	88	73.754	Canis_lupus_dingo
ENSLAFG00000013061	NCL	77	78.215	ENSCHIG00000026149	-	92	66.362	Capra_hircus
ENSLAFG00000013061	NCL	78	83.871	ENSCHIG00000010894	-	91	71.829	Capra_hircus
ENSLAFG00000013061	NCL	77	81.102	ENSCHIG00000021052	-	91	78.761	Capra_hircus
ENSLAFG00000013061	NCL	84	71.533	ENSCHIG00000012143	-	91	80.952	Capra_hircus
ENSLAFG00000013061	NCL	66	70.286	ENSTSYG00000029779	-	97	75.347	Carlito_syrichta
ENSLAFG00000013061	NCL	89	65.700	ENSTSYG00000036886	-	91	65.877	Carlito_syrichta
ENSLAFG00000013061	NCL	90	64.869	ENSCAPG00000009405	NCL	91	67.543	Cavia_aperea
ENSLAFG00000013061	NCL	91	67.786	ENSCPOG00000001034	NCL	91	70.597	Cavia_porcellus
ENSLAFG00000013061	NCL	72	72.139	ENSCCAG00000000551	-	94	72.139	Cebus_capucinus
ENSLAFG00000013061	NCL	91	74.465	ENSCATG00000037033	NCL	91	75.000	Cercocebus_atys
ENSLAFG00000013061	NCL	91	69.301	ENSCLAG00000013080	NCL	91	70.884	Chinchilla_lanigera
ENSLAFG00000013061	NCL	59	83.333	ENSCSAG00000006660	NCL	98	82.276	Chlorocebus_sabaeus
ENSLAFG00000013061	NCL	64	65.525	ENSCHOG00000012860	NCL	89	66.140	Choloepus_hoffmanni
ENSLAFG00000013061	NCL	52	100.000	ENSCANG00000036756	NCL	99	83.333	Colobus_angolensis_palliatus
ENSLAFG00000013061	NCL	91	57.450	ENSCGRG00001022350	-	95	57.489	Cricetulus_griseus_chok1gshd
ENSLAFG00000013061	NCL	91	67.278	ENSCGRG00001024315	-	91	68.550	Cricetulus_griseus_chok1gshd
ENSLAFG00000013061	NCL	92	58.514	ENSCGRG00000000507	-	93	57.870	Cricetulus_griseus_crigri
ENSLAFG00000013061	NCL	85	66.775	ENSCGRG00000017894	-	88	67.472	Cricetulus_griseus_crigri
ENSLAFG00000013061	NCL	79	84.073	ENSDNOG00000010783	-	91	73.507	Dasypus_novemcinctus
ENSLAFG00000013061	NCL	91	67.492	ENSDNOG00000046347	-	91	68.323	Dasypus_novemcinctus
ENSLAFG00000013061	NCL	55	64.343	ENSDORG00000023596	-	92	59.688	Dipodomys_ordii
ENSLAFG00000013061	NCL	77	62.032	ENSETEG00000008139	-	99	53.289	Echinops_telfairi
ENSLAFG00000013061	NCL	65	58.427	ENSETEG00000008553	-	88	56.682	Echinops_telfairi
ENSLAFG00000013061	NCL	56	83.377	ENSETEG00000014756	-	100	83.710	Echinops_telfairi
ENSLAFG00000013061	NCL	89	71.118	ENSEASG00005008488	NCL	90	80.909	Equus_asinus_asinus
ENSLAFG00000013061	NCL	91	72.121	ENSECAG00000021868	NCL	91	74.012	Equus_caballus
ENSLAFG00000013061	NCL	91	74.012	ENSFCAG00000027622	NCL	91	75.000	Felis_catus
ENSLAFG00000013061	NCL	85	83.803	ENSGGOG00000004300	NCL	91	75.709	Gorilla_gorilla
ENSLAFG00000013061	NCL	91	66.038	ENSHGLG00000011069	-	92	67.344	Heterocephalus_glaber_female
ENSLAFG00000013061	NCL	64	70.721	ENSHGLG00000005133	-	100	64.014	Heterocephalus_glaber_female
ENSLAFG00000013061	NCL	76	73.753	ENSHGLG00100000745	-	92	64.107	Heterocephalus_glaber_male
ENSLAFG00000013061	NCL	56	70.604	ENSJJAG00000016165	Ncl	91	65.415	Jaculus_jaculus
ENSLAFG00000013061	NCL	91	75.358	ENSMFAG00000040385	NCL	91	75.038	Macaca_fascicularis
ENSLAFG00000013061	NCL	91	74.504	ENSMMUG00000018094	NCL	91	75.038	Macaca_mulatta
ENSLAFG00000013061	NCL	91	75.358	ENSMNEG00000023839	NCL	91	76.236	Macaca_nemestrina
ENSLAFG00000013061	NCL	91	74.465	ENSMLEG00000028935	NCL	91	75.000	Mandrillus_leucophaeus
ENSLAFG00000013061	NCL	91	72.477	ENSMICG00000002538	-	91	73.926	Microcebus_murinus
ENSLAFG00000013061	NCL	91	69.620	ENSMICG00000029975	-	89	67.347	Microcebus_murinus
ENSLAFG00000013061	NCL	91	64.012	MGP_CAROLIEiJ_G0014362	Ncl	91	66.156	Mus_caroli
ENSLAFG00000013061	NCL	91	65.138	ENSMUSG00000026234	Ncl	91	66.361	Mus_musculus
ENSLAFG00000013061	NCL	91	65.084	MGP_PahariEiJ_G0027599	Ncl	91	66.820	Mus_pahari
ENSLAFG00000013061	NCL	91	64.985	MGP_SPRETEiJ_G0015164	Ncl	91	66.616	Mus_spretus
ENSLAFG00000013061	NCL	91	72.231	ENSMLUG00000014547	NCL	91	72.907	Myotis_lucifugus
ENSLAFG00000013061	NCL	75	70.992	ENSNGAG00000006188	-	91	56.449	Nannospalax_galili
ENSLAFG00000013061	NCL	91	67.119	ENSNGAG00000002454	-	91	67.927	Nannospalax_galili
ENSLAFG00000013061	NCL	78	87.234	ENSNLEG00000014107	-	88	69.630	Nomascus_leucogenys
ENSLAFG00000013061	NCL	56	59.659	ENSODEG00000007803	-	90	56.937	Octodon_degus
ENSLAFG00000013061	NCL	56	79.683	ENSODEG00000002748	-	91	68.323	Octodon_degus
ENSLAFG00000013061	NCL	91	66.104	ENSODEG00000003281	-	91	69.172	Octodon_degus
ENSLAFG00000013061	NCL	100	64.000	ENSODEG00000002441	-	96	71.610	Octodon_degus
ENSLAFG00000013061	NCL	91	73.003	ENSOCUG00000004312	NCL	91	74.400	Oryctolagus_cuniculus
ENSLAFG00000013061	NCL	77	76.903	ENSOGAG00000027852	NCL	90	60.062	Otolemur_garnettii
ENSLAFG00000013061	NCL	74	83.333	ENSOARG00000013270	-	100	86.813	Ovis_aries
ENSLAFG00000013061	NCL	84	77.449	ENSOARG00000020709	-	92	68.682	Ovis_aries
ENSLAFG00000013061	NCL	73	68.939	ENSOARG00000004072	-	93	59.113	Ovis_aries
ENSLAFG00000013061	NCL	85	83.803	ENSPPAG00000011619	NCL	91	75.709	Pan_paniscus
ENSLAFG00000013061	NCL	91	73.820	ENSPPRG00000012603	NCL	91	74.809	Panthera_pardus
ENSLAFG00000013061	NCL	90	73.425	ENSPTIG00000010393	NCL	90	74.422	Panthera_tigris_altaica
ENSLAFG00000013061	NCL	91	73.933	ENSPTRG00000013025	NCL	91	76.113	Pan_troglodytes
ENSLAFG00000013061	NCL	91	74.504	ENSPANG00000010292	NCL	91	75.038	Papio_anubis
ENSLAFG00000013061	NCL	85	83.803	ENSPPYG00000013265	NCL	91	69.406	Pongo_abelii
ENSLAFG00000013061	NCL	91	73.323	ENSPCOG00000003051	-	91	74.465	Propithecus_coquereli
ENSLAFG00000013061	NCL	91	69.062	ENSPCOG00000004160	-	94	70.359	Propithecus_coquereli
ENSLAFG00000013061	NCL	91	73.813	ENSPVAG00000000297	NCL	91	74.501	Pteropus_vampyrus
ENSLAFG00000013061	NCL	91	65.449	ENSRNOG00000018273	Ncl	91	67.328	Rattus_norvegicus
ENSLAFG00000013061	NCL	100	74.928	ENSRBIG00000037525	-	100	75.501	Rhinopithecus_bieti
ENSLAFG00000013061	NCL	65	83.505	ENSRBIG00000035396	-	96	81.879	Rhinopithecus_bieti
ENSLAFG00000013061	NCL	95	75.172	ENSRROG00000036103	-	99	75.726	Rhinopithecus_roxellana
ENSLAFG00000013061	NCL	100	75.000	ENSRROG00000028756	-	96	82.686	Rhinopithecus_roxellana
ENSLAFG00000013061	NCL	89	59.111	ENSSBOG00000023094	-	91	58.667	Saimiri_boliviensis_boliviensis
ENSLAFG00000013061	NCL	77	85.302	ENSSBOG00000029193	-	91	74.543	Saimiri_boliviensis_boliviensis
ENSLAFG00000013061	NCL	67	77.690	ENSSBOG00000027549	-	91	69.195	Saimiri_boliviensis_boliviensis
ENSLAFG00000013061	NCL	86	83.099	ENSSSCG00000016275	NCL	91	73.002	Sus_scrofa
ENSLAFG00000013061	NCL	81	81.222	ENSTBEG00000001546	-	94	72.714	Tupaia_belangeri
ENSLAFG00000013061	NCL	77	68.868	ENSTBEG00000002469	-	66	71.388	Tupaia_belangeri
ENSLAFG00000013061	NCL	91	72.741	ENSTTRG00000009094	NCL	91	73.272	Tursiops_truncatus
ENSLAFG00000013061	NCL	71	85.827	ENSUAMG00000005639	NCL	88	78.104	Ursus_americanus
ENSLAFG00000013061	NCL	71	77.465	ENSVPAG00000001796	NCL	70	73.620	Vicugna_pacos
ENSLAFG00000013061	NCL	91	73.879	ENSVVUG00000025564	NCL	91	74.615	Vulpes_vulpes