EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000013589 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 43481 bases
Position: chrscaffold_43:9704551-9748031
Accession: 24658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000026293	DUF1604	PF07713.13	4.8e-36	1	1
ENSLAFP00000011374	DUF1604	PF07713.13	5.2e-36	1	1
ENSLAFP00000026293	G-patch	PF01585.23	4.4e-07	1	1
ENSLAFP00000011374	G-patch	PF01585.23	4.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000013591	GPATCH1-201	2799	-	ENSLAFP00000011374	932 (aa)	-	G3TBL3
ENSLAFT00000032398	GPATCH1-202	2628	-	ENSLAFP00000026293	876 (aa)	-	G3UEN5

Gene Model

Click here to download ENSLAFG00000013589's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000013589's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000013589	GPATCH1	100	87.460	ENSG00000076650	GPATCH1	99	88.152	Homo_sapiens
ENSLAFG00000013589	GPATCH1	100	89.056	ENSAMEG00000015575	GPATCH1	99	89.010	Ailuropoda_melanoleuca
ENSLAFG00000013589	GPATCH1	86	71.271	ENSAOCG00000006668	gpatch1	77	71.271	Amphiprion_ocellaris
ENSLAFG00000013589	GPATCH1	86	54.948	ENSAPEG00000000026	gpatch1	90	52.431	Amphiprion_percula
ENSLAFG00000013589	GPATCH1	86	52.592	ENSATEG00000014494	gpatch1	90	50.915	Anabas_testudineus
ENSLAFG00000013589	GPATCH1	90	61.873	ENSAPLG00000007584	GPATCH1	96	61.105	Anas_platyrhynchos
ENSLAFG00000013589	GPATCH1	100	88.639	ENSANAG00000027002	GPATCH1	99	88.587	Aotus_nancymaae
ENSLAFG00000013589	GPATCH1	86	54.151	ENSACLG00000024740	gpatch1	81	54.353	Astatotilapia_calliptera
ENSLAFG00000013589	GPATCH1	90	51.447	ENSAMXG00000020177	gpatch1	97	51.018	Astyanax_mexicanus
ENSLAFG00000013589	GPATCH1	94	87.908	ENSBTAG00000000721	GPATCH1	99	88.248	Bos_taurus
ENSLAFG00000013589	GPATCH1	100	87.353	ENSCJAG00000000684	GPATCH1	99	87.283	Callithrix_jacchus
ENSLAFG00000013589	GPATCH1	100	89.282	ENSCAFG00000007457	GPATCH1	83	89.239	Canis_familiaris
ENSLAFG00000013589	GPATCH1	94	89.359	ENSCAFG00020019731	GPATCH1	91	89.189	Canis_lupus_dingo
ENSLAFG00000013589	GPATCH1	99	88.407	ENSCHIG00000019626	GPATCH1	99	88.901	Capra_hircus
ENSLAFG00000013589	GPATCH1	97	78.218	ENSCAPG00000008827	GPATCH1	99	79.018	Cavia_aperea
ENSLAFG00000013589	GPATCH1	100	81.283	ENSCPOG00000024477	GPATCH1	99	81.887	Cavia_porcellus
ENSLAFG00000013589	GPATCH1	100	87.567	ENSCCAG00000024676	GPATCH1	99	87.500	Cebus_capucinus
ENSLAFG00000013589	GPATCH1	100	87.674	ENSCATG00000043637	GPATCH1	99	88.370	Cercocebus_atys
ENSLAFG00000013589	GPATCH1	96	81.299	ENSCLAG00000003395	-	99	81.910	Chinchilla_lanigera
ENSLAFG00000013589	GPATCH1	100	85.974	ENSCSAG00000004743	GPATCH1	99	85.978	Chlorocebus_sabaeus
ENSLAFG00000013589	GPATCH1	92	77.778	ENSCHOG00000012865	GPATCH1	89	80.934	Choloepus_hoffmanni
ENSLAFG00000013589	GPATCH1	83	70.588	ENSCPBG00000000666	GPATCH1	92	70.588	Chrysemys_picta_bellii
ENSLAFG00000013589	GPATCH1	86	35.125	ENSCING00000012518	-	95	34.149	Ciona_intestinalis
ENSLAFG00000013589	GPATCH1	93	83.251	ENSCANG00000012540	GPATCH1	98	84.733	Colobus_angolensis_palliatus
ENSLAFG00000013589	GPATCH1	97	80.769	ENSCGRG00001016736	Gpatch1	99	80.469	Cricetulus_griseus_chok1gshd
ENSLAFG00000013589	GPATCH1	91	69.174	ENSCGRG00000005069	Gpatch1	91	67.453	Cricetulus_griseus_crigri
ENSLAFG00000013589	GPATCH1	82	51.656	ENSCSEG00000019456	-	84	63.303	Cynoglossus_semilaevis
ENSLAFG00000013589	GPATCH1	90	50.110	ENSDARG00000033418	gpatch1	92	50.991	Danio_rerio
ENSLAFG00000013589	GPATCH1	94	87.198	ENSDNOG00000005291	GPATCH1	95	87.309	Dasypus_novemcinctus
ENSLAFG00000013589	GPATCH1	94	78.694	ENSDORG00000012546	Gpatch1	95	79.201	Dipodomys_ordii
ENSLAFG00000013589	GPATCH1	74	33.524	FBgn0036386	CG8833	67	33.668	Drosophila_melanogaster
ENSLAFG00000013589	GPATCH1	99	79.632	ENSETEG00000003626	GPATCH1	92	80.024	Echinops_telfairi
ENSLAFG00000013589	GPATCH1	94	36.243	ENSEBUG00000011286	gpatch1	91	37.572	Eptatretus_burgeri
ENSLAFG00000013589	GPATCH1	99	85.075	ENSEASG00005021162	GPATCH1	99	85.075	Equus_asinus_asinus
ENSLAFG00000013589	GPATCH1	94	89.003	ENSECAG00000022743	GPATCH1	88	88.706	Equus_caballus
ENSLAFG00000013589	GPATCH1	83	78.431	ENSEEUG00000012925	GPATCH1	78	78.431	Erinaceus_europaeus
ENSLAFG00000013589	GPATCH1	99	49.280	ENSELUG00000018195	gpatch1	90	50.561	Esox_lucius
ENSLAFG00000013589	GPATCH1	100	88.734	ENSFCAG00000014917	GPATCH1	99	88.683	Felis_catus
ENSLAFG00000013589	GPATCH1	99	62.105	ENSFALG00000007821	GPATCH1	89	63.251	Ficedula_albicollis
ENSLAFG00000013589	GPATCH1	96	81.737	ENSFDAG00000003871	GPATCH1	99	81.767	Fukomys_damarensis
ENSLAFG00000013589	GPATCH1	78	51.972	ENSGMOG00000003830	gpatch1	96	51.276	Gadus_morhua
ENSLAFG00000013589	GPATCH1	93	63.605	ENSGALG00000004839	GPATCH1	93	63.604	Gallus_gallus
ENSLAFG00000013589	GPATCH1	86	51.621	ENSGACG00000017544	gpatch1	94	49.479	Gasterosteus_aculeatus
ENSLAFG00000013589	GPATCH1	100	65.441	ENSGAGG00000010067	GPATCH1	91	65.845	Gopherus_agassizii
ENSLAFG00000013589	GPATCH1	98	86.805	ENSGGOG00000010862	GPATCH1	99	88.156	Gorilla_gorilla
ENSLAFG00000013589	GPATCH1	86	53.974	ENSHBUG00000023462	gpatch1	90	52.000	Haplochromis_burtoni
ENSLAFG00000013589	GPATCH1	100	82.976	ENSHGLG00000009334	GPATCH1	99	83.388	Heterocephalus_glaber_female
ENSLAFG00000013589	GPATCH1	100	83.084	ENSHGLG00100018074	GPATCH1	99	83.496	Heterocephalus_glaber_male
ENSLAFG00000013589	GPATCH1	93	51.574	ENSIPUG00000014977	gpatch1	90	52.027	Ictalurus_punctatus
ENSLAFG00000013589	GPATCH1	100	87.138	ENSSTOG00000003720	GPATCH1	99	87.065	Ictidomys_tridecemlineatus
ENSLAFG00000013589	GPATCH1	94	83.313	ENSJJAG00000023765	Gpatch1	99	83.351	Jaculus_jaculus
ENSLAFG00000013589	GPATCH1	89	52.093	ENSKMAG00000017950	gpatch1	96	49.728	Kryptolebias_marmoratus
ENSLAFG00000013589	GPATCH1	86	52.566	ENSLBEG00000026527	gpatch1	88	50.903	Labrus_bergylta
ENSLAFG00000013589	GPATCH1	88	58.859	ENSLACG00000008130	GPATCH1	90	59.096	Latimeria_chalumnae
ENSLAFG00000013589	GPATCH1	87	57.513	ENSLOCG00000001800	gpatch1	90	55.086	Lepisosteus_oculatus
ENSLAFG00000013589	GPATCH1	94	88.285	ENSMFAG00000034418	GPATCH1	96	88.076	Macaca_fascicularis
ENSLAFG00000013589	GPATCH1	100	87.473	ENSMMUG00000011790	GPATCH1	99	88.165	Macaca_mulatta
ENSLAFG00000013589	GPATCH1	100	87.138	ENSMNEG00000045084	GPATCH1	99	87.826	Macaca_nemestrina
ENSLAFG00000013589	GPATCH1	100	76.635	ENSMLEG00000043840	GPATCH1	98	77.174	Mandrillus_leucophaeus
ENSLAFG00000013589	GPATCH1	86	54.023	ENSMZEG00005001926	gpatch1	82	54.229	Maylandia_zebra
ENSLAFG00000013589	GPATCH1	90	64.151	ENSMGAG00000005775	GPATCH1	90	63.282	Meleagris_gallopavo
ENSLAFG00000013589	GPATCH1	94	77.818	ENSMICG00000004829	GPATCH1	93	78.774	Microcebus_murinus
ENSLAFG00000013589	GPATCH1	99	81.055	ENSMOCG00000000174	Gpatch1	92	81.871	Microtus_ochrogaster
ENSLAFG00000013589	GPATCH1	86	51.266	ENSMMOG00000002140	gpatch1	98	48.341	Mola_mola
ENSLAFG00000013589	GPATCH1	94	74.306	ENSMODG00000012226	GPATCH1	90	74.765	Monodelphis_domestica
ENSLAFG00000013589	GPATCH1	86	52.611	ENSMALG00000014386	gpatch1	90	50.342	Monopterus_albus
ENSLAFG00000013589	GPATCH1	100	83.047	ENSMUSG00000063808	Gpatch1	100	96.939	Mus_musculus
ENSLAFG00000013589	GPATCH1	100	82.762	MGP_PahariEiJ_G0012816	Gpatch1	100	97.959	Mus_pahari
ENSLAFG00000013589	GPATCH1	100	82.315	MGP_SPRETEiJ_G0030681	Gpatch1	100	97.959	Mus_spretus
ENSLAFG00000013589	GPATCH1	100	88.197	ENSMPUG00000007658	GPATCH1	99	88.248	Mustela_putorius_furo
ENSLAFG00000013589	GPATCH1	100	86.052	ENSMLUG00000012161	GPATCH1	99	87.704	Myotis_lucifugus
ENSLAFG00000013589	GPATCH1	100	84.442	ENSNGAG00000012455	Gpatch1	99	81.828	Nannospalax_galili
ENSLAFG00000013589	GPATCH1	100	87.138	ENSNLEG00000007659	GPATCH1	99	87.826	Nomascus_leucogenys
ENSLAFG00000013589	GPATCH1	84	67.984	ENSMEUG00000015174	GPATCH1	79	67.984	Notamacropus_eugenii
ENSLAFG00000013589	GPATCH1	99	79.957	ENSODEG00000007103	GPATCH1	99	80.259	Octodon_degus
ENSLAFG00000013589	GPATCH1	90	53.873	ENSONIG00000003302	gpatch1	91	53.873	Oreochromis_niloticus
ENSLAFG00000013589	GPATCH1	99	71.444	ENSOANG00000012732	GPATCH1	91	73.995	Ornithorhynchus_anatinus
ENSLAFG00000013589	GPATCH1	100	86.803	ENSOCUG00000015905	GPATCH1	99	87.051	Oryctolagus_cuniculus
ENSLAFG00000013589	GPATCH1	89	50.764	ENSORLG00000018706	gpatch1	88	51.106	Oryzias_latipes
ENSLAFG00000013589	GPATCH1	89	49.360	ENSOMEG00000022688	gpatch1	90	51.639	Oryzias_melastigma
ENSLAFG00000013589	GPATCH1	90	87.737	ENSOGAG00000004016	GPATCH1	100	87.737	Otolemur_garnettii
ENSLAFG00000013589	GPATCH1	94	87.927	ENSOARG00000004365	GPATCH1	98	87.829	Ovis_aries
ENSLAFG00000013589	GPATCH1	100	87.031	ENSPPAG00000020990	GPATCH1	99	87.717	Pan_paniscus
ENSLAFG00000013589	GPATCH1	100	88.948	ENSPPRG00000017245	GPATCH1	99	88.901	Panthera_pardus
ENSLAFG00000013589	GPATCH1	100	89.592	ENSPTIG00000019649	GPATCH1	99	89.554	Panthera_tigris_altaica
ENSLAFG00000013589	GPATCH1	100	87.138	ENSPTRG00000010803	GPATCH1	99	87.826	Pan_troglodytes
ENSLAFG00000013589	GPATCH1	94	88.164	ENSPANG00000012374	GPATCH1	96	88.367	Papio_anubis
ENSLAFG00000013589	GPATCH1	86	56.853	ENSPKIG00000020745	gpatch1	79	57.002	Paramormyrops_kingsleyae
ENSLAFG00000013589	GPATCH1	100	62.739	ENSPSIG00000013433	GPATCH1	91	65.461	Pelodiscus_sinensis
ENSLAFG00000013589	GPATCH1	100	82.189	ENSPEMG00000000636	Gpatch1	91	83.294	Peromyscus_maniculatus_bairdii
ENSLAFG00000013589	GPATCH1	94	74.275	ENSPCIG00000021003	GPATCH1	96	74.765	Phascolarctos_cinereus
ENSLAFG00000013589	GPATCH1	75	49.481	ENSPREG00000008264	gpatch1	97	45.338	Poecilia_reticulata
ENSLAFG00000013589	GPATCH1	100	84.673	ENSPPYG00000009824	GPATCH1	99	85.326	Pongo_abelii
ENSLAFG00000013589	GPATCH1	85	83.879	ENSPCAG00000005931	GPATCH1	90	84.458	Procavia_capensis
ENSLAFG00000013589	GPATCH1	94	83.092	ENSPCOG00000009674	GPATCH1	97	83.117	Propithecus_coquereli
ENSLAFG00000013589	GPATCH1	91	88.496	ENSPVAG00000017767	GPATCH1	91	88.496	Pteropus_vampyrus
ENSLAFG00000013589	GPATCH1	86	54.311	ENSPNYG00000018189	gpatch1	91	54.511	Pundamilia_nyererei
ENSLAFG00000013589	GPATCH1	92	52.689	ENSPNAG00000013187	gpatch1	90	53.311	Pygocentrus_nattereri
ENSLAFG00000013589	GPATCH1	100	82.511	ENSRNOG00000011584	Gpatch1	99	82.372	Rattus_norvegicus
ENSLAFG00000013589	GPATCH1	100	79.550	ENSRBIG00000034723	GPATCH1	92	80.992	Rhinopithecus_bieti
ENSLAFG00000013589	GPATCH1	100	87.353	ENSRROG00000024428	GPATCH1	99	88.043	Rhinopithecus_roxellana
ENSLAFG00000013589	GPATCH1	100	87.353	ENSSBOG00000034650	GPATCH1	99	87.717	Saimiri_boliviensis_boliviensis
ENSLAFG00000013589	GPATCH1	99	73.936	ENSSHAG00000016016	GPATCH1	99	73.644	Sarcophilus_harrisii
ENSLAFG00000013589	GPATCH1	86	54.962	ENSSFOG00015011535	gpatch1	89	53.196	Scleropages_formosus
ENSLAFG00000013589	GPATCH1	81	54.881	ENSSMAG00000002883	gpatch1	93	46.667	Scophthalmus_maximus
ENSLAFG00000013589	GPATCH1	86	52.730	ENSSDUG00000007444	gpatch1	90	49.779	Seriola_dumerili
ENSLAFG00000013589	GPATCH1	86	52.802	ENSSLDG00000002856	gpatch1	92	52.226	Seriola_lalandi_dorsalis
ENSLAFG00000013589	GPATCH1	77	84.718	ENSSARG00000004108	GPATCH1	72	84.718	Sorex_araneus
ENSLAFG00000013589	GPATCH1	94	87.908	ENSSSCG00000002865	GPATCH1	94	87.986	Sus_scrofa
ENSLAFG00000013589	GPATCH1	99	63.646	ENSTGUG00000009401	GPATCH1	96	60.787	Taeniopygia_guttata
ENSLAFG00000013589	GPATCH1	86	51.376	ENSTRUG00000025081	gpatch1	90	48.402	Takifugu_rubripes
ENSLAFG00000013589	GPATCH1	86	51.376	ENSTRUG00000005785	-	90	48.402	Takifugu_rubripes
ENSLAFG00000013589	GPATCH1	86	52.113	ENSTNIG00000002554	gpatch1	99	52.985	Tetraodon_nigroviridis
ENSLAFG00000013589	GPATCH1	68	74.818	ENSTBEG00000007750	-	84	74.818	Tupaia_belangeri
ENSLAFG00000013589	GPATCH1	99	81.128	ENSTTRG00000012221	GPATCH1	99	81.128	Tursiops_truncatus
ENSLAFG00000013589	GPATCH1	99	84.156	ENSUMAG00000014645	GPATCH1	98	87.879	Ursus_maritimus
ENSLAFG00000013589	GPATCH1	82	96.571	ENSVPAG00000010313	GPATCH1	88	96.739	Vicugna_pacos
ENSLAFG00000013589	GPATCH1	94	89.016	ENSVVUG00000016572	GPATCH1	91	88.837	Vulpes_vulpes
ENSLAFG00000013589	GPATCH1	99	51.429	ENSXETG00000018276	gpatch1	94	54.308	Xenopus_tropicalis