EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000013830 (Gene tree)
Gene ID: -
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 29476 bases
Position: chrscaffold_34:2745755-2775230
Accession: 16638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000011584	PWI	PF01480.17	5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000013833	SRRM1-201	2826	-	ENSLAFP00000011584	941 (aa)	-	G3TC31

Gene Model

Click here to download ENSLAFG00000013830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000013830's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000013830	SRRM1	100	94.486	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSLAFG00000013830	SRRM1	100	94.592	ENSAMEG00000010075	SRRM1	100	94.592	Ailuropoda_melanoleuca
ENSLAFG00000013830	SRRM1	61	66.779	ENSAPLG00000002066	SRRM1	59	76.418	Anas_platyrhynchos
ENSLAFG00000013830	SRRM1	100	94.592	ENSANAG00000035606	SRRM1	100	94.592	Aotus_nancymaae
ENSLAFG00000013830	SRRM1	100	94.899	ENSBTAG00000013772	SRRM1	100	94.899	Bos_taurus
ENSLAFG00000013830	SRRM1	100	93.637	ENSCJAG00000020822	SRRM1	100	93.637	Callithrix_jacchus
ENSLAFG00000013830	SRRM1	100	93.637	ENSCAFG00020020948	SRRM1	100	93.637	Canis_lupus_dingo
ENSLAFG00000013830	SRRM1	100	93.750	ENSCHIG00000014656	SRRM1	100	93.750	Capra_hircus
ENSLAFG00000013830	SRRM1	100	94.168	ENSTSYG00000006782	SRRM1	100	94.168	Carlito_syrichta
ENSLAFG00000013830	SRRM1	99	91.542	ENSCAPG00000011473	SRRM1	100	91.542	Cavia_aperea
ENSLAFG00000013830	SRRM1	100	92.561	ENSCPOG00000015594	SRRM1	100	92.561	Cavia_porcellus
ENSLAFG00000013830	SRRM1	100	94.168	ENSCCAG00000029474	SRRM1	100	94.168	Cebus_capucinus
ENSLAFG00000013830	SRRM1	60	92.895	ENSCATG00000031303	SRRM1	100	94.592	Cercocebus_atys
ENSLAFG00000013830	SRRM1	100	93.411	ENSCLAG00000014592	SRRM1	100	93.411	Chinchilla_lanigera
ENSLAFG00000013830	SRRM1	73	95.291	ENSCHOG00000000027	SRRM1	73	95.291	Choloepus_hoffmanni
ENSLAFG00000013830	SRRM1	96	90.979	ENSDNOG00000049141	SRRM1	98	90.979	Dasypus_novemcinctus
ENSLAFG00000013830	SRRM1	100	94.274	ENSEASG00005004270	SRRM1	100	94.274	Equus_asinus_asinus
ENSLAFG00000013830	SRRM1	100	94.380	ENSECAG00000026981	SRRM1	100	94.380	Equus_caballus
ENSLAFG00000013830	SRRM1	100	94.804	ENSFCAG00000000678	-	100	94.804	Felis_catus
ENSLAFG00000013830	SRRM1	100	94.155	ENSFDAG00000009903	SRRM1	100	94.155	Fukomys_damarensis
ENSLAFG00000013830	SRRM1	100	94.380	ENSGGOG00000005209	SRRM1	100	94.380	Gorilla_gorilla
ENSLAFG00000013830	SRRM1	100	94.261	ENSHGLG00000017105	SRRM1	100	94.261	Heterocephalus_glaber_female
ENSLAFG00000013830	SRRM1	99	92.423	ENSHGLG00100016772	SRRM1	99	92.423	Heterocephalus_glaber_male
ENSLAFG00000013830	SRRM1	100	94.698	ENSSTOG00000014640	SRRM1	100	94.698	Ictidomys_tridecemlineatus
ENSLAFG00000013830	SRRM1	60	92.895	ENSMNEG00000039415	SRRM1	100	94.592	Macaca_nemestrina
ENSLAFG00000013830	SRRM1	53	96.215	ENSMLEG00000038030	-	92	96.215	Mandrillus_leucophaeus
ENSLAFG00000013830	SRRM1	100	94.592	ENSMICG00000006553	SRRM1	100	94.592	Microcebus_murinus
ENSLAFG00000013830	SRRM1	100	94.486	ENSNLEG00000008966	SRRM1	100	94.486	Nomascus_leucogenys
ENSLAFG00000013830	SRRM1	54	84.770	ENSMEUG00000014704	SRRM1	51	92.632	Notamacropus_eugenii
ENSLAFG00000013830	SRRM1	100	93.432	ENSOCUG00000008438	SRRM1	100	93.432	Oryctolagus_cuniculus
ENSLAFG00000013830	SRRM1	100	93.743	ENSOGAG00000010210	SRRM1	100	93.743	Otolemur_garnettii
ENSLAFG00000013830	SRRM1	93	94.719	ENSOARG00000006453	SRRM1	99	94.719	Ovis_aries
ENSLAFG00000013830	SRRM1	100	94.380	ENSPPAG00000043918	SRRM1	100	94.380	Pan_paniscus
ENSLAFG00000013830	SRRM1	100	94.804	ENSPPRG00000002509	SRRM1	100	94.804	Panthera_pardus
ENSLAFG00000013830	SRRM1	100	89.630	ENSPTIG00000008778	-	100	89.630	Panthera_tigris_altaica
ENSLAFG00000013830	SRRM1	100	95.016	ENSPTRG00000000349	SRRM1	100	95.016	Pan_troglodytes
ENSLAFG00000013830	SRRM1	54	92.338	ENSPANG00000010194	SRRM1	100	93.531	Papio_anubis
ENSLAFG00000013830	SRRM1	100	94.280	ENSPPYG00000001716	SRRM1	100	94.280	Pongo_abelii
ENSLAFG00000013830	SRRM1	92	79.218	ENSPCAG00000015138	SRRM1	91	79.218	Procavia_capensis
ENSLAFG00000013830	SRRM1	100	94.174	ENSPCOG00000021311	SRRM1	100	94.174	Propithecus_coquereli
ENSLAFG00000013830	SRRM1	100	94.804	ENSPVAG00000005836	SRRM1	100	94.804	Pteropus_vampyrus
ENSLAFG00000013830	SRRM1	100	92.895	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSLAFG00000013830	SRRM1	100	85.790	ENSSARG00000013718	SRRM1	100	85.790	Sorex_araneus
ENSLAFG00000013830	SRRM1	99	95.085	ENSSSCG00000032947	SRRM1	100	94.912	Sus_scrofa
ENSLAFG00000013830	SRRM1	100	94.261	ENSTBEG00000000100	SRRM1	100	94.261	Tupaia_belangeri
ENSLAFG00000013830	SRRM1	99	93.590	ENSTTRG00000009365	SRRM1	100	93.590	Tursiops_truncatus
ENSLAFG00000013830	SRRM1	89	93.421	ENSUMAG00000013121	SRRM1	95	93.421	Ursus_maritimus
ENSLAFG00000013830	SRRM1	96	92.172	ENSVPAG00000007698	SRRM1	100	92.172	Vicugna_pacos
ENSLAFG00000013830	SRRM1	100	90.350	ENSVVUG00000026966	SRRM1	100	90.350	Vulpes_vulpes