EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000014006 (Gene tree)
Gene ID: -
Gene Symbol: YBX2
Alias: CSDA3|Contrin|MSY2
Full Name: Y-box binding protein 2
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 6101 bases
Position: chrscaffold_47:11281433-11287533
Accession: 100659171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000011734	CSD	PF00313.22	7.1e-26	1	1
ENSLAFP00000023896	CSD	PF00313.22	3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000014010	YBX2-201	1080	-	ENSLAFP00000011734	359 (aa)	XP_003416936	G3TCE9
ENSLAFT00000027614	YBX2-202	954	-	ENSLAFP00000023896	317 (aa)	-	G3U7T8

Gene Model

Click here to download ENSLAFG00000014006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000014006's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000014006	YBX2	84	90.584	ENSG00000006047	YBX2	99	87.730	Homo_sapiens
ENSLAFG00000014006	YBX2	55	91.837	ENSAMEG00000016564	YBX2	87	91.667	Ailuropoda_melanoleuca
ENSLAFG00000014006	YBX2	84	88.519	ENSANAG00000019540	YBX2	86	93.836	Aotus_nancymaae
ENSLAFG00000014006	YBX2	100	96.944	ENSBTAG00000009126	YBX2	100	96.944	Bos_taurus
ENSLAFG00000014006	YBX2	84	93.046	ENSCJAG00000016581	-	84	91.722	Callithrix_jacchus
ENSLAFG00000014006	YBX2	84	85.926	ENSCJAG00000042146	-	97	91.606	Callithrix_jacchus
ENSLAFG00000014006	YBX2	79	75.794	ENSCAFG00000005162	-	90	77.953	Canis_familiaris
ENSLAFG00000014006	YBX2	100	95.913	ENSCAFG00000016128	-	100	95.913	Canis_familiaris
ENSLAFG00000014006	YBX2	84	92.880	ENSCAFG00020008884	YBX2	84	92.880	Canis_lupus_dingo
ENSLAFG00000014006	YBX2	100	96.389	ENSCHIG00000016407	YBX2	100	96.389	Capra_hircus
ENSLAFG00000014006	YBX2	84	85.662	ENSTSYG00000030765	YBX2	92	90.876	Carlito_syrichta
ENSLAFG00000014006	YBX2	84	91.045	ENSCAPG00000011432	YBX2	100	96.629	Cavia_aperea
ENSLAFG00000014006	YBX2	100	95.833	ENSCPOG00000009543	YBX2	100	95.833	Cavia_porcellus
ENSLAFG00000014006	YBX2	100	95.317	ENSCCAG00000025671	YBX2	100	95.317	Cebus_capucinus
ENSLAFG00000014006	YBX2	84	94.371	ENSCATG00000036919	YBX2	84	94.371	Cercocebus_atys
ENSLAFG00000014006	YBX2	87	89.247	ENSCLAG00000010306	YBX2	96	97.037	Chinchilla_lanigera
ENSLAFG00000014006	YBX2	84	94.371	ENSCSAG00000011857	YBX2	84	94.371	Chlorocebus_sabaeus
ENSLAFG00000014006	YBX2	80	65.891	ENSCPBG00000022288	YBX2	81	71.984	Chrysemys_picta_bellii
ENSLAFG00000014006	YBX2	84	88.060	ENSCANG00000007129	YBX2	97	92.910	Colobus_angolensis_palliatus
ENSLAFG00000014006	YBX2	100	97.222	ENSCGRG00001000751	Ybx2	100	97.222	Cricetulus_griseus_chok1gshd
ENSLAFG00000014006	YBX2	85	89.744	ENSCGRG00000007683	Ybx2	99	96.296	Cricetulus_griseus_crigri
ENSLAFG00000014006	YBX2	84	90.299	ENSDNOG00000013746	YBX2	97	85.000	Dasypus_novemcinctus
ENSLAFG00000014006	YBX2	88	88.968	ENSDORG00000010882	Ybx2	95	97.388	Dipodomys_ordii
ENSLAFG00000014006	YBX2	54	89.167	ENSETEG00000014271	YBX2	53	89.062	Echinops_telfairi
ENSLAFG00000014006	YBX2	83	92.282	ENSEASG00005018928	YBX2	83	92.177	Equus_asinus_asinus
ENSLAFG00000014006	YBX2	90	90.798	ENSECAG00000009996	YBX2	79	90.759	Equus_caballus
ENSLAFG00000014006	YBX2	100	96.667	ENSFCAG00000018097	YBX2	100	96.667	Felis_catus
ENSLAFG00000014006	YBX2	75	66.667	ENSGAGG00000016159	YBX2	86	75.709	Gopherus_agassizii
ENSLAFG00000014006	YBX2	84	92.715	ENSGGOG00000007399	YBX2	84	92.715	Gorilla_gorilla
ENSLAFG00000014006	YBX2	84	94.371	ENSHGLG00000014186	YBX2	84	94.371	Heterocephalus_glaber_female
ENSLAFG00000014006	YBX2	84	92.910	ENSSTOG00000008630	YBX2	99	97.778	Ictidomys_tridecemlineatus
ENSLAFG00000014006	YBX2	85	91.241	ENSJJAG00000013072	Ybx2	95	97.770	Jaculus_jaculus
ENSLAFG00000014006	YBX2	84	94.371	ENSMFAG00000039921	YBX2	84	94.371	Macaca_fascicularis
ENSLAFG00000014006	YBX2	84	94.371	ENSMNEG00000045221	YBX2	84	94.371	Macaca_nemestrina
ENSLAFG00000014006	YBX2	83	70.455	ENSMLEG00000029266	-	84	74.007	Mandrillus_leucophaeus
ENSLAFG00000014006	YBX2	83	90.189	ENSMLEG00000039452	YBX2	97	94.030	Mandrillus_leucophaeus
ENSLAFG00000014006	YBX2	100	97.222	ENSMAUG00000022062	Ybx2	100	97.222	Mesocricetus_auratus
ENSLAFG00000014006	YBX2	100	96.667	ENSMICG00000012453	YBX2	100	96.667	Microcebus_murinus
ENSLAFG00000014006	YBX2	100	97.222	ENSMOCG00000013958	Ybx2	100	97.222	Microtus_ochrogaster
ENSLAFG00000014006	YBX2	78	87.952	ENSMODG00000017596	YBX2	78	90.559	Monodelphis_domestica
ENSLAFG00000014006	YBX2	100	97.222	MGP_CAROLIEiJ_G0016606	Ybx2	100	97.222	Mus_caroli
ENSLAFG00000014006	YBX2	100	97.222	ENSMUSG00000018554	Ybx2	100	97.222	Mus_musculus
ENSLAFG00000014006	YBX2	100	97.222	MGP_PahariEiJ_G0017737	Ybx2	100	97.222	Mus_pahari
ENSLAFG00000014006	YBX2	100	97.222	MGP_SPRETEiJ_G0017442	Ybx2	100	97.222	Mus_spretus
ENSLAFG00000014006	YBX2	77	91.870	ENSMPUG00000010386	YBX2	93	91.870	Mustela_putorius_furo
ENSLAFG00000014006	YBX2	93	88.657	ENSMLUG00000004686	YBX2	99	80.838	Myotis_lucifugus
ENSLAFG00000014006	YBX2	84	95.364	ENSNGAG00000011707	Ybx2	85	95.364	Nannospalax_galili
ENSLAFG00000014006	YBX2	83	95.000	ENSNLEG00000008063	-	100	93.667	Nomascus_leucogenys
ENSLAFG00000014006	YBX2	83	83.774	ENSMEUG00000006947	YBX2	90	87.086	Notamacropus_eugenii
ENSLAFG00000014006	YBX2	81	91.034	ENSOPRG00000013773	YBX2	100	90.690	Ochotona_princeps
ENSLAFG00000014006	YBX2	84	95.033	ENSODEG00000017530	YBX2	96	95.556	Octodon_degus
ENSLAFG00000014006	YBX2	97	81.962	ENSOCUG00000015064	YBX2	95	86.913	Oryctolagus_cuniculus
ENSLAFG00000014006	YBX2	84	91.418	ENSOGAG00000004392	YBX2	100	97.015	Otolemur_garnettii
ENSLAFG00000014006	YBX2	84	91.852	ENSOARG00000011562	YBX2	78	96.029	Ovis_aries
ENSLAFG00000014006	YBX2	82	90.698	ENSPPAG00000041892	YBX2	100	90.698	Pan_paniscus
ENSLAFG00000014006	YBX2	100	96.953	ENSPPRG00000000782	YBX2	100	96.953	Panthera_pardus
ENSLAFG00000014006	YBX2	97	78.317	ENSPTRG00000051288	-	85	91.353	Pan_troglodytes
ENSLAFG00000014006	YBX2	84	91.234	ENSPTRG00000008673	YBX2	89	97.419	Pan_troglodytes
ENSLAFG00000014006	YBX2	83	94.314	ENSPANG00000024250	YBX2	84	94.314	Papio_anubis
ENSLAFG00000014006	YBX2	83	68.561	ENSPANG00000032747	-	74	67.774	Papio_anubis
ENSLAFG00000014006	YBX2	82	66.912	ENSPSIG00000012364	YBX2	99	74.545	Pelodiscus_sinensis
ENSLAFG00000014006	YBX2	82	85.769	ENSPCIG00000028819	YBX2	92	85.441	Phascolarctos_cinereus
ENSLAFG00000014006	YBX2	85	95.738	ENSPCAG00000008019	YBX2	84	96.013	Procavia_capensis
ENSLAFG00000014006	YBX2	83	95.333	ENSPCOG00000006030	YBX2	84	95.033	Propithecus_coquereli
ENSLAFG00000014006	YBX2	100	87.535	ENSPVAG00000005050	YBX2	100	87.535	Pteropus_vampyrus
ENSLAFG00000014006	YBX2	100	97.222	ENSRNOG00000017117	Ybx2	100	97.222	Rattus_norvegicus
ENSLAFG00000014006	YBX2	84	94.040	ENSRBIG00000040919	YBX2	85	94.040	Rhinopithecus_bieti
ENSLAFG00000014006	YBX2	74	93.191	ENSRROG00000041728	YBX2	99	82.492	Rhinopithecus_roxellana
ENSLAFG00000014006	YBX2	84	90.299	ENSSBOG00000029566	YBX2	97	95.149	Saimiri_boliviensis_boliviensis
ENSLAFG00000014006	YBX2	83	87.170	ENSSHAG00000007786	YBX2	95	86.000	Sarcophilus_harrisii
ENSLAFG00000014006	YBX2	100	96.944	ENSSARG00000000488	YBX2	100	96.944	Sorex_araneus
ENSLAFG00000014006	YBX2	82	64.179	ENSSPUG00000018250	YBX2	99	67.677	Sphenodon_punctatus
ENSLAFG00000014006	YBX2	100	96.944	ENSSSCG00000017938	YBX2	100	96.944	Sus_scrofa
ENSLAFG00000014006	YBX2	83	93.311	ENSTBEG00000001266	YBX2	89	93.980	Tupaia_belangeri
ENSLAFG00000014006	YBX2	55	100.000	ENSTTRG00000009780	YBX2	56	100.000	Tursiops_truncatus
ENSLAFG00000014006	YBX2	75	95.816	ENSUAMG00000014725	YBX2	100	91.353	Ursus_americanus
ENSLAFG00000014006	YBX2	69	95.475	ENSUMAG00000015222	YBX2	90	90.079	Ursus_maritimus
ENSLAFG00000014006	YBX2	77	78.862	ENSVPAG00000003104	-	100	78.862	Vicugna_pacos
ENSLAFG00000014006	YBX2	75	95.000	ENSVVUG00000027830	-	100	90.672	Vulpes_vulpes
ENSLAFG00000014006	YBX2	81	78.378	ENSVVUG00000012111	-	78	84.646	Vulpes_vulpes