EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000014072 (Gene tree)
Gene ID: -
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 93239 bases
Position: chrscaffold_26:30031070-30124308
Accession: 100655459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000011783	zf-CCCH	PF00642.24	2.3e-06	1	1
ENSLAFP00000011783	TRM	PF02005.16	2.9e-151	1	1
ENSLAFP00000011783	Met_10	PF02475.16	3.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000014072	TRMT1-201	1947	XM_010593276	ENSLAFP00000011783	649 (aa)	XP_010591578	G3TCJ0

Gene Model

Click here to download ENSLAFG00000014072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000014072's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000014072	TRMT1	99	89.392	ENSG00000104907	TRMT1	100	95.288	Homo_sapiens
ENSLAFG00000014072	TRMT1	100	86.441	ENSAMEG00000012598	TRMT1	97	86.441	Ailuropoda_melanoleuca
ENSLAFG00000014072	TRMT1	92	58.804	ENSACIG00000018680	trmt1	91	58.804	Amphilophus_citrinellus
ENSLAFG00000014072	TRMT1	92	65.050	ENSAOCG00000006781	trmt1	89	65.050	Amphiprion_ocellaris
ENSLAFG00000014072	TRMT1	92	65.050	ENSAPEG00000007712	trmt1	89	65.050	Amphiprion_percula
ENSLAFG00000014072	TRMT1	88	68.348	ENSATEG00000001872	trmt1	84	68.348	Anabas_testudineus
ENSLAFG00000014072	TRMT1	92	65.728	ENSACAG00000003825	TRMT1	97	65.728	Anolis_carolinensis
ENSLAFG00000014072	TRMT1	100	82.542	ENSANAG00000023016	TRMT1	99	85.251	Aotus_nancymaae
ENSLAFG00000014072	TRMT1	94	61.022	ENSACLG00000010073	trmt1	96	61.022	Astatotilapia_calliptera
ENSLAFG00000014072	TRMT1	88	67.301	ENSAMXG00000012026	trmt1	85	67.301	Astyanax_mexicanus
ENSLAFG00000014072	TRMT1	100	86.963	ENSBTAG00000019325	TRMT1	93	86.963	Bos_taurus
ENSLAFG00000014072	TRMT1	84	39.711	WBGene00006613	trm-1	99	39.711	Caenorhabditis_elegans
ENSLAFG00000014072	TRMT1	99	82.743	ENSCJAG00000004566	TRMT1	99	82.743	Callithrix_jacchus
ENSLAFG00000014072	TRMT1	100	87.982	ENSCAFG00000017070	TRMT1	98	88.676	Canis_familiaris
ENSLAFG00000014072	TRMT1	100	87.057	ENSCAFG00020005397	TRMT1	98	84.438	Canis_lupus_dingo
ENSLAFG00000014072	TRMT1	100	86.524	ENSCHIG00000013569	TRMT1	98	86.524	Capra_hircus
ENSLAFG00000014072	TRMT1	99	82.115	ENSTSYG00000003207	TRMT1	98	81.917	Carlito_syrichta
ENSLAFG00000014072	TRMT1	84	80.874	ENSCAPG00000003355	TRMT1	96	80.874	Cavia_aperea
ENSLAFG00000014072	TRMT1	98	83.307	ENSCPOG00000011754	TRMT1	96	83.307	Cavia_porcellus
ENSLAFG00000014072	TRMT1	97	83.599	ENSCCAG00000022263	TRMT1	99	84.065	Cebus_capucinus
ENSLAFG00000014072	TRMT1	100	88.769	ENSCATG00000039850	TRMT1	98	88.769	Cercocebus_atys
ENSLAFG00000014072	TRMT1	82	75.053	ENSCATG00000038220	-	93	75.053	Cercocebus_atys
ENSLAFG00000014072	TRMT1	99	85.426	ENSCLAG00000015295	TRMT1	95	85.426	Chinchilla_lanigera
ENSLAFG00000014072	TRMT1	81	90.494	ENSCSAG00000006500	TRMT1	99	90.494	Chlorocebus_sabaeus
ENSLAFG00000014072	TRMT1	96	65.732	ENSCPBG00000023866	TRMT1	94	66.354	Chrysemys_picta_bellii
ENSLAFG00000014072	TRMT1	86	45.070	ENSCING00000002884	-	98	45.070	Ciona_intestinalis
ENSLAFG00000014072	TRMT1	84	45.109	ENSCSAVG00000010927	-	99	45.269	Ciona_savignyi
ENSLAFG00000014072	TRMT1	99	71.628	ENSCANG00000040631	TRMT1	98	71.628	Colobus_angolensis_palliatus
ENSLAFG00000014072	TRMT1	92	70.805	ENSCANG00000031650	-	92	70.805	Colobus_angolensis_palliatus
ENSLAFG00000014072	TRMT1	99	82.407	ENSCGRG00001022594	Trmt1	97	82.407	Cricetulus_griseus_chok1gshd
ENSLAFG00000014072	TRMT1	99	82.407	ENSCGRG00000017732	Trmt1	97	82.407	Cricetulus_griseus_crigri
ENSLAFG00000014072	TRMT1	88	66.261	ENSCSEG00000001643	trmt1	84	67.899	Cynoglossus_semilaevis
ENSLAFG00000014072	TRMT1	93	64.610	ENSCVAG00000011886	trmt1	92	64.610	Cyprinodon_variegatus
ENSLAFG00000014072	TRMT1	88	65.017	ENSDARG00000010978	trmt1	85	65.345	Danio_rerio
ENSLAFG00000014072	TRMT1	84	61.343	ENSDNOG00000048240	-	94	61.343	Dasypus_novemcinctus
ENSLAFG00000014072	TRMT1	99	81.085	ENSDORG00000014298	Trmt1	98	81.085	Dipodomys_ordii
ENSLAFG00000014072	TRMT1	79	48.555	FBgn0032430	CG6388	87	48.555	Drosophila_melanogaster
ENSLAFG00000014072	TRMT1	53	84.828	ENSETEG00000015483	-	52	84.828	Echinops_telfairi
ENSLAFG00000014072	TRMT1	80	52.998	ENSEBUG00000003449	trmt1	76	52.662	Eptatretus_burgeri
ENSLAFG00000014072	TRMT1	93	88.264	ENSEASG00005004050	TRMT1	98	85.805	Equus_asinus_asinus
ENSLAFG00000014072	TRMT1	96	86.356	ENSECAG00000016149	TRMT1	98	85.965	Equus_caballus
ENSLAFG00000014072	TRMT1	61	72.292	ENSEEUG00000014102	-	100	72.292	Erinaceus_europaeus
ENSLAFG00000014072	TRMT1	94	60.932	ENSELUG00000021659	trmt1	92	60.932	Esox_lucius
ENSLAFG00000014072	TRMT1	99	87.132	ENSFCAG00000000483	TRMT1	98	87.132	Felis_catus
ENSLAFG00000014072	TRMT1	99	84.006	ENSFDAG00000007386	TRMT1	97	84.006	Fukomys_damarensis
ENSLAFG00000014072	TRMT1	88	65.331	ENSFHEG00000012865	trmt1	85	70.097	Fundulus_heteroclitus
ENSLAFG00000014072	TRMT1	88	60.243	ENSGMOG00000006564	trmt1	98	60.764	Gadus_morhua
ENSLAFG00000014072	TRMT1	89	67.238	ENSGAFG00000011862	trmt1	90	67.925	Gambusia_affinis
ENSLAFG00000014072	TRMT1	90	63.077	ENSGACG00000000227	trmt1	94	63.077	Gasterosteus_aculeatus
ENSLAFG00000014072	TRMT1	94	66.774	ENSGAGG00000016432	TRMT1	92	66.774	Gopherus_agassizii
ENSLAFG00000014072	TRMT1	97	90.476	ENSGGOG00000014007	TRMT1	98	89.009	Gorilla_gorilla
ENSLAFG00000014072	TRMT1	86	58.244	ENSHBUG00000008821	trmt1	92	58.244	Haplochromis_burtoni
ENSLAFG00000014072	TRMT1	99	84.627	ENSHGLG00000015972	TRMT1	98	84.627	Heterocephalus_glaber_female
ENSLAFG00000014072	TRMT1	99	78.450	ENSHGLG00100018112	TRMT1	98	78.450	Heterocephalus_glaber_male
ENSLAFG00000014072	TRMT1	88	63.351	ENSHCOG00000009447	trmt1	88	63.351	Hippocampus_comes
ENSLAFG00000014072	TRMT1	90	64.047	ENSIPUG00000002899	trmt1	87	64.548	Ictalurus_punctatus
ENSLAFG00000014072	TRMT1	100	86.022	ENSSTOG00000012531	TRMT1	98	86.022	Ictidomys_tridecemlineatus
ENSLAFG00000014072	TRMT1	95	83.065	ENSJJAG00000017154	Trmt1	98	80.462	Jaculus_jaculus
ENSLAFG00000014072	TRMT1	90	67.521	ENSKMAG00000011809	trmt1	98	66.050	Kryptolebias_marmoratus
ENSLAFG00000014072	TRMT1	88	67.190	ENSLBEG00000012703	trmt1	84	67.190	Labrus_bergylta
ENSLAFG00000014072	TRMT1	88	57.831	ENSLACG00000014585	TRMT1	96	57.119	Latimeria_chalumnae
ENSLAFG00000014072	TRMT1	88	62.500	ENSLOCG00000006479	trmt1	97	63.276	Lepisosteus_oculatus
ENSLAFG00000014072	TRMT1	100	88.923	ENSMFAG00000033143	TRMT1	98	88.923	Macaca_fascicularis
ENSLAFG00000014072	TRMT1	99	82.099	ENSMMUG00000001167	TRMT1	99	82.099	Macaca_mulatta
ENSLAFG00000014072	TRMT1	100	88.923	ENSMNEG00000037867	TRMT1	98	88.923	Macaca_nemestrina
ENSLAFG00000014072	TRMT1	99	88.545	ENSMLEG00000016142	TRMT1	98	88.545	Mandrillus_leucophaeus
ENSLAFG00000014072	TRMT1	88	67.483	ENSMAMG00000004357	trmt1	85	67.483	Mastacembelus_armatus
ENSLAFG00000014072	TRMT1	92	62.706	ENSMZEG00005014510	trmt1	90	62.706	Maylandia_zebra
ENSLAFG00000014072	TRMT1	99	81.636	ENSMAUG00000011134	Trmt1	97	81.664	Mesocricetus_auratus
ENSLAFG00000014072	TRMT1	97	89.715	ENSMICG00000000793	TRMT1	95	89.715	Microcebus_murinus
ENSLAFG00000014072	TRMT1	99	81.790	ENSMOCG00000015895	Trmt1	97	81.818	Microtus_ochrogaster
ENSLAFG00000014072	TRMT1	88	65.165	ENSMMOG00000011097	trmt1	92	65.165	Mola_mola
ENSLAFG00000014072	TRMT1	93	76.480	ENSMODG00000011619	TRMT1	98	76.480	Monodelphis_domestica
ENSLAFG00000014072	TRMT1	100	83.051	MGP_CAROLIEiJ_G0031304	Trmt1	100	81.369	Mus_caroli
ENSLAFG00000014072	TRMT1	100	82.435	ENSMUSG00000001909	Trmt1	100	80.608	Mus_musculus
ENSLAFG00000014072	TRMT1	100	82.280	MGP_SPRETEiJ_G0032422	Trmt1	100	80.228	Mus_spretus
ENSLAFG00000014072	TRMT1	100	87.211	ENSMPUG00000004210	TRMT1	93	87.211	Mustela_putorius_furo
ENSLAFG00000014072	TRMT1	100	84.825	ENSMLUG00000012809	TRMT1	98	84.825	Myotis_lucifugus
ENSLAFG00000014072	TRMT1	98	82.575	ENSNGAG00000022486	Trmt1	96	82.575	Nannospalax_galili
ENSLAFG00000014072	TRMT1	76	70.149	ENSNBRG00000024376	trmt1	85	70.149	Neolamprologus_brichardi
ENSLAFG00000014072	TRMT1	78	90.000	ENSNLEG00000013019	-	98	86.826	Nomascus_leucogenys
ENSLAFG00000014072	TRMT1	92	75.126	ENSMEUG00000013756	TRMT1	99	75.126	Notamacropus_eugenii
ENSLAFG00000014072	TRMT1	80	90.024	ENSOPRG00000009471	-	79	90.024	Ochotona_princeps
ENSLAFG00000014072	TRMT1	100	83.742	ENSODEG00000010323	TRMT1	98	83.742	Octodon_degus
ENSLAFG00000014072	TRMT1	95	64.573	ENSONIG00000000400	trmt1	99	64.573	Oreochromis_niloticus
ENSLAFG00000014072	TRMT1	81	88.000	ENSOCUG00000021934	TRMT1	99	88.000	Oryctolagus_cuniculus
ENSLAFG00000014072	TRMT1	88	62.478	ENSORLG00000020074	trmt1	90	62.478	Oryzias_latipes
ENSLAFG00000014072	TRMT1	88	65.505	ENSORLG00020007561	trmt1	89	65.331	Oryzias_latipes_hni
ENSLAFG00000014072	TRMT1	88	65.679	ENSORLG00015006547	trmt1	86	65.679	Oryzias_latipes_hsok
ENSLAFG00000014072	TRMT1	93	63.252	ENSOMEG00000019343	trmt1	93	63.252	Oryzias_melastigma
ENSLAFG00000014072	TRMT1	96	84.713	ENSOGAG00000025576	TRMT1	98	84.713	Otolemur_garnettii
ENSLAFG00000014072	TRMT1	100	71.189	ENSOARG00000009397	TRMT1	92	71.341	Ovis_aries
ENSLAFG00000014072	TRMT1	99	78.750	ENSPPRG00000012117	TRMT1	98	78.750	Panthera_pardus
ENSLAFG00000014072	TRMT1	77	89.058	ENSPTIG00000008833	TRMT1	95	89.058	Panthera_tigris_altaica
ENSLAFG00000014072	TRMT1	97	90.476	ENSPTRG00000010557	TRMT1	98	89.009	Pan_troglodytes
ENSLAFG00000014072	TRMT1	93	68.760	ENSPTRG00000050421	-	92	68.760	Pan_troglodytes
ENSLAFG00000014072	TRMT1	84	74.843	ENSPANG00000034058	-	93	74.843	Papio_anubis
ENSLAFG00000014072	TRMT1	99	88.889	ENSPANG00000009247	TRMT1	98	88.889	Papio_anubis
ENSLAFG00000014072	TRMT1	88	67.188	ENSPKIG00000005309	trmt1	84	67.188	Paramormyrops_kingsleyae
ENSLAFG00000014072	TRMT1	90	57.823	ENSPSIG00000008762	TRMT1	83	57.823	Pelodiscus_sinensis
ENSLAFG00000014072	TRMT1	88	65.969	ENSPMGG00000019764	trmt1	98	62.158	Periophthalmus_magnuspinnatus
ENSLAFG00000014072	TRMT1	99	83.951	ENSPEMG00000016247	Trmt1	97	83.975	Peromyscus_maniculatus_bairdii
ENSLAFG00000014072	TRMT1	89	60.241	ENSPMAG00000004329	trmt1	90	60.241	Petromyzon_marinus
ENSLAFG00000014072	TRMT1	99	72.519	ENSPCIG00000019273	TRMT1	99	72.519	Phascolarctos_cinereus
ENSLAFG00000014072	TRMT1	94	66.613	ENSPFOG00000008527	trmt1	95	66.613	Poecilia_formosa
ENSLAFG00000014072	TRMT1	94	66.613	ENSPLAG00000018788	trmt1	95	68.327	Poecilia_latipinna
ENSLAFG00000014072	TRMT1	94	66.613	ENSPMEG00000013120	trmt1	95	66.613	Poecilia_mexicana
ENSLAFG00000014072	TRMT1	98	63.158	ENSPREG00000000211	trmt1	89	66.833	Poecilia_reticulata
ENSLAFG00000014072	TRMT1	97	90.317	ENSPPYG00000009622	TRMT1	98	88.854	Pongo_abelii
ENSLAFG00000014072	TRMT1	99	82.844	ENSPCAG00000003698	TRMT1	99	82.844	Procavia_capensis
ENSLAFG00000014072	TRMT1	97	89.809	ENSPCOG00000008653	TRMT1	95	89.809	Propithecus_coquereli
ENSLAFG00000014072	TRMT1	96	90.209	ENSPVAG00000015076	TRMT1	95	90.209	Pteropus_vampyrus
ENSLAFG00000014072	TRMT1	88	64.098	ENSPNYG00000013960	trmt1	92	64.098	Pundamilia_nyererei
ENSLAFG00000014072	TRMT1	88	68.399	ENSPNAG00000024859	trmt1	98	68.399	Pygocentrus_nattereri
ENSLAFG00000014072	TRMT1	96	83.706	ENSRNOG00000002914	Trmt1	98	83.706	Rattus_norvegicus
ENSLAFG00000014072	TRMT1	100	88.615	ENSRBIG00000038324	TRMT1	98	88.615	Rhinopithecus_bieti
ENSLAFG00000014072	TRMT1	92	71.189	ENSRBIG00000037505	-	93	71.189	Rhinopithecus_bieti
ENSLAFG00000014072	TRMT1	92	70.519	ENSRROG00000031847	-	92	70.519	Rhinopithecus_roxellana
ENSLAFG00000014072	TRMT1	100	88.462	ENSRROG00000028599	TRMT1	98	88.462	Rhinopithecus_roxellana
ENSLAFG00000014072	TRMT1	78	37.453	YDR120C	-	92	37.944	Saccharomyces_cerevisiae
ENSLAFG00000014072	TRMT1	99	83.178	ENSSBOG00000028861	TRMT1	99	84.065	Saimiri_boliviensis_boliviensis
ENSLAFG00000014072	TRMT1	89	77.643	ENSSHAG00000014381	TRMT1	98	75.574	Sarcophilus_harrisii
ENSLAFG00000014072	TRMT1	88	67.361	ENSSFOG00015004139	trmt1	90	64.344	Scleropages_formosus
ENSLAFG00000014072	TRMT1	88	67.247	ENSSMAG00000021136	trmt1	85	67.247	Scophthalmus_maximus
ENSLAFG00000014072	TRMT1	88	67.422	ENSSDUG00000012740	trmt1	84	67.422	Seriola_dumerili
ENSLAFG00000014072	TRMT1	88	67.073	ENSSLDG00000005971	trmt1	84	67.073	Seriola_lalandi_dorsalis
ENSLAFG00000014072	TRMT1	87	83.451	ENSSARG00000005138	TRMT1	100	83.451	Sorex_araneus
ENSLAFG00000014072	TRMT1	89	54.110	ENSSPUG00000001084	TRMT1	91	54.452	Sphenodon_punctatus
ENSLAFG00000014072	TRMT1	92	63.394	ENSSPAG00000007153	trmt1	98	63.394	Stegastes_partitus
ENSLAFG00000014072	TRMT1	97	88.748	ENSSSCG00000013744	TRMT1	99	88.748	Sus_scrofa
ENSLAFG00000014072	TRMT1	87	62.435	ENSTRUG00000010700	trmt1	86	62.609	Takifugu_rubripes
ENSLAFG00000014072	TRMT1	88	65.620	ENSTNIG00000018808	trmt1	98	65.620	Tetraodon_nigroviridis
ENSLAFG00000014072	TRMT1	98	85.266	ENSTTRG00000006379	TRMT1	98	85.162	Tursiops_truncatus
ENSLAFG00000014072	TRMT1	99	86.739	ENSUAMG00000022911	TRMT1	98	86.739	Ursus_americanus
ENSLAFG00000014072	TRMT1	97	87.081	ENSUMAG00000006027	TRMT1	98	87.081	Ursus_maritimus
ENSLAFG00000014072	TRMT1	100	88.290	ENSVVUG00000024177	TRMT1	98	88.290	Vulpes_vulpes
ENSLAFG00000014072	TRMT1	71	72.017	ENSXETG00000033863	TRMT1	92	72.017	Xenopus_tropicalis
ENSLAFG00000014072	TRMT1	88	68.522	ENSXCOG00000015733	trmt1	88	69.056	Xiphophorus_couchianus
ENSLAFG00000014072	TRMT1	88	68.348	ENSXMAG00000013823	trmt1	98	68.696	Xiphophorus_maculatus