EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000014202 (Gene tree)
Gene ID: -
Gene Symbol: DDX39B
Alias: BAT1|D6S81E|UAP56
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 11185 bases
Position: chrscaffold_138:1589290-1600474
Accession: 13917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000021146	ResIII	PF04851.15	4.5e-08	1	1
ENSLAFP00000011893	ResIII	PF04851.15	1.1e-07	1	1
ENSLAFP00000021146	DEAD	PF00270.29	2.4e-39	1	1
ENSLAFP00000011893	DEAD	PF00270.29	5.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000014203	DDX39B-201	1284	-	ENSLAFP00000011893	427 (aa)	-	G3TCS8
ENSLAFT00000032751	DDX39B-202	786	-	ENSLAFP00000021146	262 (aa)	-	G3TZY8

Gene Model

Click here to download ENSLAFG00000014202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000014202's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000014202	DDX39B	100	90.888	ENSLAFG00000022777	DDX39A	100	91.121
ENSLAFG00000014202	DDX39B	93	33.580	ENSLAFG00000014646	DDX20	50	33.580
ENSLAFG00000014202	DDX39B	92	30.617	ENSLAFG00000000532	DDX25	82	30.617
ENSLAFG00000014202	DDX39B	99	34.266	ENSLAFG00000011012	DDX6	79	35.659
ENSLAFG00000014202	DDX39B	91	32.663	ENSLAFG00000006651	-	82	32.663
ENSLAFG00000014202	DDX39B	91	32.663	ENSLAFG00000006659	DDX19A	82	32.663
ENSLAFG00000014202	DDX39B	79	30.199	ENSLAFG00000004461	DDX5	53	30.199
ENSLAFG00000014202	DDX39B	87	32.095	ENSLAFG00000002934	DDX49	78	32.095
ENSLAFG00000014202	DDX39B	86	38.211	ENSLAFG00000003619	EIF4A2	90	38.211
ENSLAFG00000014202	DDX39B	85	37.912	ENSLAFG00000015628	EIF4A3	88	37.912
ENSLAFG00000014202	DDX39B	92	36.132	ENSLAFG00000001107	EIF4A1	95	36.132
ENSLAFG00000014202	DDX39B	81	34.682	ENSLAFG00000015474	DDX47	76	34.682

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000014202	DDX39B	100	99.766	ENSG00000198563	DDX39B	100	100.000	Homo_sapiens
ENSLAFG00000014202	DDX39B	100	99.533	ENSAMEG00000009508	DDX39B	99	99.533	Ailuropoda_melanoleuca
ENSLAFG00000014202	DDX39B	99	93.443	ENSACIG00000004534	ddx39b	98	93.443	Amphilophus_citrinellus
ENSLAFG00000014202	DDX39B	100	92.593	ENSATEG00000012366	ddx39b	100	92.593	Anabas_testudineus
ENSLAFG00000014202	DDX39B	100	96.970	ENSACAG00000012240	DDX39B	100	96.970	Anolis_carolinensis
ENSLAFG00000014202	DDX39B	100	99.766	ENSANAG00000030372	DDX39B	100	99.766	Aotus_nancymaae
ENSLAFG00000014202	DDX39B	99	90.553	ENSACLG00000018759	ddx39b	99	90.553	Astatotilapia_calliptera
ENSLAFG00000014202	DDX39B	100	92.202	ENSAMXG00000017837	ddx39b	100	92.202	Astyanax_mexicanus
ENSLAFG00000014202	DDX39B	100	99.533	ENSBTAG00000014490	DDX39B	100	99.533	Bos_taurus
ENSLAFG00000014202	DDX39B	100	99.766	ENSCJAG00000003152	DDX39B	100	99.766	Callithrix_jacchus
ENSLAFG00000014202	DDX39B	100	99.299	ENSCAFG00000000509	DDX39B	100	99.677	Canis_familiaris
ENSLAFG00000014202	DDX39B	100	99.299	ENSCAFG00020020530	DDX39B	100	99.299	Canis_lupus_dingo
ENSLAFG00000014202	DDX39B	100	99.533	ENSCHIG00000004579	DDX39B	100	99.533	Capra_hircus
ENSLAFG00000014202	DDX39B	100	85.480	ENSTSYG00000029741	-	91	88.095	Carlito_syrichta
ENSLAFG00000014202	DDX39B	100	99.766	ENSTSYG00000010226	-	100	99.766	Carlito_syrichta
ENSLAFG00000014202	DDX39B	100	99.533	ENSCAPG00000010066	DDX39B	100	99.533	Cavia_aperea
ENSLAFG00000014202	DDX39B	100	99.533	ENSCPOG00000002335	DDX39B	100	99.533	Cavia_porcellus
ENSLAFG00000014202	DDX39B	100	99.766	ENSCCAG00000027897	DDX39B	100	99.766	Cebus_capucinus
ENSLAFG00000014202	DDX39B	99	90.118	ENSCATG00000043709	DDX39B	99	90.118	Cercocebus_atys
ENSLAFG00000014202	DDX39B	100	99.533	ENSCLAG00000014555	DDX39B	100	99.533	Chinchilla_lanigera
ENSLAFG00000014202	DDX39B	99	99.529	ENSCSAG00000008517	DDX39B	100	99.529	Chlorocebus_sabaeus
ENSLAFG00000014202	DDX39B	64	99.634	ENSCPBG00000014671	-	100	99.634	Chrysemys_picta_bellii
ENSLAFG00000014202	DDX39B	100	99.766	ENSCANG00000041217	DDX39B	100	99.766	Colobus_angolensis_palliatus
ENSLAFG00000014202	DDX39B	83	84.034	ENSCGRG00001021916	-	89	84.034	Cricetulus_griseus_chok1gshd
ENSLAFG00000014202	DDX39B	95	98.790	ENSCGRG00001017315	-	95	99.029	Cricetulus_griseus_chok1gshd
ENSLAFG00000014202	DDX39B	78	98.537	ENSCGRG00000000078	-	90	98.537	Cricetulus_griseus_crigri
ENSLAFG00000014202	DDX39B	95	98.790	ENSCGRG00000012479	-	82	95.420	Cricetulus_griseus_crigri
ENSLAFG00000014202	DDX39B	100	91.954	ENSDARG00000036069	ddx39b	100	92.184	Danio_rerio
ENSLAFG00000014202	DDX39B	100	99.766	ENSDNOG00000010215	DDX39B	100	99.766	Dasypus_novemcinctus
ENSLAFG00000014202	DDX39B	94	99.592	ENSDORG00000004985	Ddx39b	100	99.465	Dipodomys_ordii
ENSLAFG00000014202	DDX39B	94	97.959	ENSETEG00000009649	DDX39B	87	86.898	Echinops_telfairi
ENSLAFG00000014202	DDX39B	100	99.766	ENSEASG00005017156	DDX39B	100	99.766	Equus_asinus_asinus
ENSLAFG00000014202	DDX39B	100	99.766	ENSECAG00000007750	DDX39B	100	99.766	Equus_caballus
ENSLAFG00000014202	DDX39B	100	92.111	ENSELUG00000017904	ddx39b	100	92.111	Esox_lucius
ENSLAFG00000014202	DDX39B	100	99.533	ENSFCAG00000004497	DDX39B	100	99.533	Felis_catus
ENSLAFG00000014202	DDX39B	100	99.533	ENSFDAG00000011074	DDX39B	100	99.533	Fukomys_damarensis
ENSLAFG00000014202	DDX39B	74	99.367	ENSGAGG00000001300	-	80	99.367	Gopherus_agassizii
ENSLAFG00000014202	DDX39B	100	99.766	ENSGGOG00000005989	DDX39B	100	99.766	Gorilla_gorilla
ENSLAFG00000014202	DDX39B	78	88.038	ENSHBUG00000022054	-	77	88.038	Haplochromis_burtoni
ENSLAFG00000014202	DDX39B	100	99.065	ENSHGLG00000019248	DDX39B	100	99.065	Heterocephalus_glaber_female
ENSLAFG00000014202	DDX39B	100	99.065	ENSHGLG00100011850	DDX39B	100	99.065	Heterocephalus_glaber_male
ENSLAFG00000014202	DDX39B	100	91.055	ENSIPUG00000015733	DDX39B	94	91.514	Ictalurus_punctatus
ENSLAFG00000014202	DDX39B	100	99.299	ENSSTOG00000012838	DDX39B	100	99.299	Ictidomys_tridecemlineatus
ENSLAFG00000014202	DDX39B	100	99.065	ENSJJAG00000005660	-	100	99.065	Jaculus_jaculus
ENSLAFG00000014202	DDX39B	95	75.000	ENSLBEG00000017177	-	90	73.077	Labrus_bergylta
ENSLAFG00000014202	DDX39B	99	78.199	ENSLBEG00000012254	ddx39b	99	77.986	Labrus_bergylta
ENSLAFG00000014202	DDX39B	100	89.631	ENSLACG00000002110	DDX39B	100	89.631	Latimeria_chalumnae
ENSLAFG00000014202	DDX39B	100	99.766	ENSMFAG00000034233	DDX39B	100	99.766	Macaca_fascicularis
ENSLAFG00000014202	DDX39B	100	99.766	ENSMMUG00000008839	DDX39B	100	99.766	Macaca_mulatta
ENSLAFG00000014202	DDX39B	100	99.766	ENSMNEG00000041059	DDX39B	100	99.766	Macaca_nemestrina
ENSLAFG00000014202	DDX39B	100	99.766	ENSMLEG00000043791	DDX39B	100	99.766	Mandrillus_leucophaeus
ENSLAFG00000014202	DDX39B	99	90.553	ENSMZEG00005017654	ddx39b	99	90.553	Maylandia_zebra
ENSLAFG00000014202	DDX39B	100	99.065	ENSMAUG00000008059	Ddx39b	100	99.065	Mesocricetus_auratus
ENSLAFG00000014202	DDX39B	100	99.766	ENSMICG00000017349	DDX39B	100	99.766	Microcebus_murinus
ENSLAFG00000014202	DDX39B	100	99.299	ENSMOCG00000011169	Ddx39b	100	99.299	Microtus_ochrogaster
ENSLAFG00000014202	DDX39B	94	100.000	ENSMODG00000015791	DDX39B	88	99.468	Monodelphis_domestica
ENSLAFG00000014202	DDX39B	68	97.765	MGP_CAROLIEiJ_G0021519	-	97	97.765	Mus_caroli
ENSLAFG00000014202	DDX39B	100	99.299	ENSMUSG00000019432	Ddx39b	100	100.000	Mus_musculus
ENSLAFG00000014202	DDX39B	100	99.299	MGP_PahariEiJ_G0020513	Ddx39b	100	100.000	Mus_pahari
ENSLAFG00000014202	DDX39B	100	99.299	MGP_SPRETEiJ_G0022424	Ddx39b	100	99.299	Mus_spretus
ENSLAFG00000014202	DDX39B	100	99.533	ENSMPUG00000011407	DDX39B	100	99.533	Mustela_putorius_furo
ENSLAFG00000014202	DDX39B	73	99.678	ENSMLUG00000001681	DDX39B	100	99.678	Myotis_lucifugus
ENSLAFG00000014202	DDX39B	100	99.766	ENSNGAG00000022948	Ddx39b	100	99.766	Nannospalax_galili
ENSLAFG00000014202	DDX39B	100	75.234	ENSNLEG00000006094	DDX39B	100	75.234	Nomascus_leucogenys
ENSLAFG00000014202	DDX39B	85	99.550	ENSMEUG00000008264	DDX39B	86	99.550	Notamacropus_eugenii
ENSLAFG00000014202	DDX39B	100	99.533	ENSOPRG00000011923	DDX39B	100	99.533	Ochotona_princeps
ENSLAFG00000014202	DDX39B	100	99.299	ENSODEG00000018083	DDX39B	100	99.299	Octodon_degus
ENSLAFG00000014202	DDX39B	100	91.667	ENSONIG00000004740	ddx39b	100	91.667	Oreochromis_niloticus
ENSLAFG00000014202	DDX39B	90	99.156	ENSOANG00000008361	DDX39B	95	99.156	Ornithorhynchus_anatinus
ENSLAFG00000014202	DDX39B	100	95.937	ENSOCUG00000024126	DDX39B	100	95.937	Oryctolagus_cuniculus
ENSLAFG00000014202	DDX39B	84	91.444	ENSOGAG00000009067	-	100	98.148	Otolemur_garnettii
ENSLAFG00000014202	DDX39B	100	98.368	ENSOGAG00000028850	-	100	98.368	Otolemur_garnettii
ENSLAFG00000014202	DDX39B	100	99.533	ENSOARG00000008787	DDX39B	98	99.533	Ovis_aries
ENSLAFG00000014202	DDX39B	100	99.766	ENSPPAG00000043072	DDX39B	100	99.766	Pan_paniscus
ENSLAFG00000014202	DDX39B	100	99.533	ENSPPRG00000001913	DDX39B	100	99.533	Panthera_pardus
ENSLAFG00000014202	DDX39B	100	98.598	ENSPTIG00000017669	DDX39B	100	98.598	Panthera_tigris_altaica
ENSLAFG00000014202	DDX39B	100	99.766	ENSPTRG00000032509	DDX39B	100	99.766	Pan_troglodytes
ENSLAFG00000014202	DDX39B	100	99.766	ENSPANG00000018609	DDX39B	100	99.766	Papio_anubis
ENSLAFG00000014202	DDX39B	100	90.618	ENSPKIG00000011324	ddx39b	100	91.076	Paramormyrops_kingsleyae
ENSLAFG00000014202	DDX39B	100	99.065	ENSPEMG00000016905	Ddx39b	100	99.065	Peromyscus_maniculatus_bairdii
ENSLAFG00000014202	DDX39B	100	99.766	ENSPCIG00000017572	DDX39B	100	99.766	Phascolarctos_cinereus
ENSLAFG00000014202	DDX39B	100	99.766	ENSPPYG00000016433	DDX39B	100	99.766	Pongo_abelii
ENSLAFG00000014202	DDX39B	66	99.296	ENSPCAG00000003484	DDX39B	100	99.296	Procavia_capensis
ENSLAFG00000014202	DDX39B	100	99.766	ENSPCOG00000018656	DDX39B	100	99.766	Propithecus_coquereli
ENSLAFG00000014202	DDX39B	100	99.299	ENSPVAG00000004653	DDX39B	100	99.299	Pteropus_vampyrus
ENSLAFG00000014202	DDX39B	99	82.670	ENSPNYG00000010382	ddx39b	98	82.670	Pundamilia_nyererei
ENSLAFG00000014202	DDX39B	100	91.972	ENSPNAG00000026926	ddx39b	100	91.972	Pygocentrus_nattereri
ENSLAFG00000014202	DDX39B	100	99.299	ENSRNOG00000000841	Ddx39b	100	99.299	Rattus_norvegicus
ENSLAFG00000014202	DDX39B	100	96.183	ENSRBIG00000031309	DDX39B	100	89.930	Rhinopithecus_bieti
ENSLAFG00000014202	DDX39B	100	99.766	ENSRROG00000039517	DDX39B	100	99.766	Rhinopithecus_roxellana
ENSLAFG00000014202	DDX39B	100	96.183	ENSSBOG00000035513	-	100	89.930	Saimiri_boliviensis_boliviensis
ENSLAFG00000014202	DDX39B	56	97.945	ENSSBOG00000030486	-	97	97.945	Saimiri_boliviensis_boliviensis
ENSLAFG00000014202	DDX39B	100	99.766	ENSSHAG00000003209	DDX39B	100	99.766	Sarcophilus_harrisii
ENSLAFG00000014202	DDX39B	100	90.847	ENSSFOG00015016107	ddx39b	100	91.533	Scleropages_formosus
ENSLAFG00000014202	DDX39B	100	93.056	ENSSDUG00000011557	ddx39b	100	93.287	Seriola_dumerili
ENSLAFG00000014202	DDX39B	100	92.824	ENSSLDG00000015763	ddx39b	100	93.056	Seriola_lalandi_dorsalis
ENSLAFG00000014202	DDX39B	94	99.184	ENSSARG00000005245	DDX39B	100	87.701	Sorex_araneus
ENSLAFG00000014202	DDX39B	100	97.664	ENSSPUG00000012805	DDX39B	100	97.664	Sphenodon_punctatus
ENSLAFG00000014202	DDX39B	100	99.766	ENSSSCG00000001400	DDX39B	100	99.711	Sus_scrofa
ENSLAFG00000014202	DDX39B	100	76.581	ENSTBEG00000003721	DDX39B	100	76.581	Tupaia_belangeri
ENSLAFG00000014202	DDX39B	100	91.224	ENSTTRG00000014074	DDX39B	100	91.224	Tursiops_truncatus
ENSLAFG00000014202	DDX39B	100	87.179	ENSUAMG00000027335	DDX39B	100	87.179	Ursus_americanus
ENSLAFG00000014202	DDX39B	100	91.101	ENSUMAG00000015124	DDX39B	100	91.101	Ursus_maritimus
ENSLAFG00000014202	DDX39B	61	100.000	ENSVPAG00000009167	-	74	100.000	Vicugna_pacos
ENSLAFG00000014202	DDX39B	100	99.299	ENSVVUG00000019518	DDX39B	99	99.299	Vulpes_vulpes
ENSLAFG00000014202	DDX39B	100	83.721	ENSXETG00000002498	ddx39b	99	83.721	Xenopus_tropicalis