EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000014462 (Gene tree)
Gene ID: -
Gene Symbol: SFSWAP
Alias: SFRS8|SWAP
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 75144 bases
Position: chrscaffold_113:2348756-2423899
Accession: 10790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000012119	DRY_EERY	PF09750.9	1e-11	1	1
ENSLAFP00000020171	Surp	PF01805.20	3.4e-27	1	2
ENSLAFP00000020171	Surp	PF01805.20	3.4e-27	2	2
ENSLAFP00000012119	Surp	PF01805.20	4.5e-27	1	2
ENSLAFP00000012119	Surp	PF01805.20	4.5e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000036370	SFSWAP-202	2340	-	ENSLAFP00000020171	779 (aa)	-	G3TX63
ENSLAFT00000014463	SFSWAP-201	2619	-	ENSLAFP00000012119	872 (aa)	-	G3TDB0

Gene Model

Click here to download ENSLAFG00000014462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000014462's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000014462	SFSWAP	100	89.444	ENSG00000061936	SFSWAP	98	85.294	Homo_sapiens
ENSLAFG00000014462	SFSWAP	71	61.085	ENSAPOG00000005784	sfswap	87	80.952	Acanthochromis_polyacanthus
ENSLAFG00000014462	SFSWAP	100	84.307	ENSAMEG00000013818	SFSWAP	92	84.994	Ailuropoda_melanoleuca
ENSLAFG00000014462	SFSWAP	72	59.476	ENSAOCG00000016469	sfswap	85	68.788	Amphiprion_ocellaris
ENSLAFG00000014462	SFSWAP	73	60.703	ENSAPEG00000004965	sfswap	85	68.788	Amphiprion_percula
ENSLAFG00000014462	SFSWAP	100	80.159	ENSAPLG00000013808	SFSWAP	92	79.592	Anas_platyrhynchos
ENSLAFG00000014462	SFSWAP	100	88.523	ENSANAG00000001518	SFSWAP	92	87.273	Aotus_nancymaae
ENSLAFG00000014462	SFSWAP	78	57.851	ENSAMXG00000008657	sfswap	51	51.272	Astyanax_mexicanus
ENSLAFG00000014462	SFSWAP	100	89.257	ENSBTAG00000000439	SFSWAP	92	88.686	Bos_taurus
ENSLAFG00000014462	SFSWAP	100	89.078	ENSCJAG00000003613	SFSWAP	99	85.990	Callithrix_jacchus
ENSLAFG00000014462	SFSWAP	100	86.842	ENSCAFG00000006625	SFSWAP	92	85.682	Canis_familiaris
ENSLAFG00000014462	SFSWAP	99	81.899	ENSCAFG00020011254	SFSWAP	99	80.735	Canis_lupus_dingo
ENSLAFG00000014462	SFSWAP	100	89.257	ENSCHIG00000008838	SFSWAP	92	88.686	Capra_hircus
ENSLAFG00000014462	SFSWAP	100	88.041	ENSTSYG00000010303	SFSWAP	92	88.383	Carlito_syrichta
ENSLAFG00000014462	SFSWAP	100	85.438	ENSCAPG00000004394	SFSWAP	96	85.210	Cavia_aperea
ENSLAFG00000014462	SFSWAP	100	85.097	ENSCPOG00000005280	SFSWAP	92	85.438	Cavia_porcellus
ENSLAFG00000014462	SFSWAP	100	87.600	ENSCCAG00000037255	SFSWAP	92	87.486	Cebus_capucinus
ENSLAFG00000014462	SFSWAP	100	89.636	ENSCATG00000031094	SFSWAP	92	89.408	Cercocebus_atys
ENSLAFG00000014462	SFSWAP	100	87.244	ENSCLAG00000008380	SFSWAP	92	86.902	Chinchilla_lanigera
ENSLAFG00000014462	SFSWAP	100	89.636	ENSCSAG00000001884	SFSWAP	92	89.408	Chlorocebus_sabaeus
ENSLAFG00000014462	SFSWAP	99	74.091	ENSCHOG00000003578	SFSWAP	80	89.877	Choloepus_hoffmanni
ENSLAFG00000014462	SFSWAP	100	89.636	ENSCANG00000036501	SFSWAP	92	89.408	Colobus_angolensis_palliatus
ENSLAFG00000014462	SFSWAP	100	84.589	ENSCGRG00001011284	Sfswap	92	84.247	Cricetulus_griseus_chok1gshd
ENSLAFG00000014462	SFSWAP	100	84.589	ENSCGRG00000017417	Sfswap	92	84.247	Cricetulus_griseus_crigri
ENSLAFG00000014462	SFSWAP	78	58.065	ENSCSEG00000003773	sfswap	52	47.189	Cynoglossus_semilaevis
ENSLAFG00000014462	SFSWAP	53	53.829	ENSCVAG00000001205	-	72	51.008	Cyprinodon_variegatus
ENSLAFG00000014462	SFSWAP	100	55.202	ENSDARG00000005980	sfswap	50	51.521	Danio_rerio
ENSLAFG00000014462	SFSWAP	100	78.043	ENSDORG00000010352	Sfswap	94	77.361	Dipodomys_ordii
ENSLAFG00000014462	SFSWAP	91	74.237	ENSETEG00000016657	-	89	74.237	Echinops_telfairi
ENSLAFG00000014462	SFSWAP	96	38.961	ENSEBUG00000016748	SFSWAP	93	43.046	Eptatretus_burgeri
ENSLAFG00000014462	SFSWAP	100	88.229	ENSEASG00005016502	SFSWAP	92	88.000	Equus_asinus_asinus
ENSLAFG00000014462	SFSWAP	98	87.939	ENSECAG00000007657	SFSWAP	91	87.705	Equus_caballus
ENSLAFG00000014462	SFSWAP	99	70.675	ENSEEUG00000001713	SFSWAP	94	75.093	Erinaceus_europaeus
ENSLAFG00000014462	SFSWAP	100	52.371	ENSELUG00000010942	sfswap	82	68.142	Esox_lucius
ENSLAFG00000014462	SFSWAP	100	86.743	ENSFCAG00000010778	SFSWAP	92	86.270	Felis_catus
ENSLAFG00000014462	SFSWAP	100	78.822	ENSFALG00000009577	SFSWAP	91	79.162	Ficedula_albicollis
ENSLAFG00000014462	SFSWAP	100	84.127	ENSFDAG00000017235	SFSWAP	92	84.807	Fukomys_damarensis
ENSLAFG00000014462	SFSWAP	100	79.096	ENSGALG00000002487	SFSWAP	93	78.757	Gallus_gallus
ENSLAFG00000014462	SFSWAP	77	58.032	ENSGAFG00000006272	sfswap	51	51.111	Gambusia_affinis
ENSLAFG00000014462	SFSWAP	81	72.549	ENSGACG00000017647	sfswap	88	64.134	Gasterosteus_aculeatus
ENSLAFG00000014462	SFSWAP	100	76.770	ENSGAGG00000002611	SFSWAP	92	78.319	Gopherus_agassizii
ENSLAFG00000014462	SFSWAP	100	89.330	ENSGGOG00000014877	SFSWAP	92	89.103	Gorilla_gorilla
ENSLAFG00000014462	SFSWAP	89	58.988	ENSHBUG00000005629	sfswap	52	66.972	Haplochromis_burtoni
ENSLAFG00000014462	SFSWAP	100	86.560	ENSHGLG00000019216	SFSWAP	92	86.788	Heterocephalus_glaber_female
ENSLAFG00000014462	SFSWAP	100	87.016	ENSHGLG00100019350	SFSWAP	92	86.674	Heterocephalus_glaber_male
ENSLAFG00000014462	SFSWAP	73	58.283	ENSHCOG00000009475	sfswap	93	50.691	Hippocampus_comes
ENSLAFG00000014462	SFSWAP	99	55.087	ENSIPUG00000010598	sfswap	53	69.822	Ictalurus_punctatus
ENSLAFG00000014462	SFSWAP	100	87.685	ENSSTOG00000000773	SFSWAP	92	87.343	Ictidomys_tridecemlineatus
ENSLAFG00000014462	SFSWAP	100	86.286	ENSJJAG00000006609	Sfswap	92	86.171	Jaculus_jaculus
ENSLAFG00000014462	SFSWAP	92	54.934	ENSKMAG00000013168	sfswap	74	67.173	Kryptolebias_marmoratus
ENSLAFG00000014462	SFSWAP	56	58.144	ENSLOCG00000006202	sfswap	51	58.779	Lepisosteus_oculatus
ENSLAFG00000014462	SFSWAP	98	89.148	ENSMFAG00000037352	SFSWAP	78	88.915	Macaca_fascicularis
ENSLAFG00000014462	SFSWAP	100	89.066	ENSMMUG00000020343	SFSWAP	92	89.294	Macaca_mulatta
ENSLAFG00000014462	SFSWAP	100	89.066	ENSMNEG00000041002	SFSWAP	92	89.294	Macaca_nemestrina
ENSLAFG00000014462	SFSWAP	100	87.585	ENSMLEG00000035728	SFSWAP	92	87.358	Mandrillus_leucophaeus
ENSLAFG00000014462	SFSWAP	100	69.010	ENSMGAG00000002191	SFSWAP	93	72.465	Meleagris_gallopavo
ENSLAFG00000014462	SFSWAP	100	84.361	ENSMOCG00000014390	Sfswap	92	84.018	Microtus_ochrogaster
ENSLAFG00000014462	SFSWAP	73	59.909	ENSMALG00000012603	sfswap	50	66.867	Monopterus_albus
ENSLAFG00000014462	SFSWAP	100	85.274	MGP_CAROLIEiJ_G0027780	Sfswap	92	84.932	Mus_caroli
ENSLAFG00000014462	SFSWAP	100	84.932	ENSMUSG00000029439	Sfswap	92	84.589	Mus_musculus
ENSLAFG00000014462	SFSWAP	100	84.528	MGP_PahariEiJ_G0024360	Sfswap	92	84.187	Mus_pahari
ENSLAFG00000014462	SFSWAP	100	84.932	MGP_SPRETEiJ_G0028779	Sfswap	92	84.589	Mus_spretus
ENSLAFG00000014462	SFSWAP	100	86.156	ENSMPUG00000002218	SFSWAP	92	85.567	Mustela_putorius_furo
ENSLAFG00000014462	SFSWAP	89	78.960	ENSMLUG00000011296	SFSWAP	85	85.007	Myotis_lucifugus
ENSLAFG00000014462	SFSWAP	100	85.405	ENSNGAG00000018167	Sfswap	92	85.063	Nannospalax_galili
ENSLAFG00000014462	SFSWAP	100	86.818	ENSNLEG00000008386	SFSWAP	92	85.114	Nomascus_leucogenys
ENSLAFG00000014462	SFSWAP	77	86.182	ENSMEUG00000009556	-	79	85.091	Notamacropus_eugenii
ENSLAFG00000014462	SFSWAP	95	85.379	ENSOPRG00000006983	-	86	86.728	Ochotona_princeps
ENSLAFG00000014462	SFSWAP	100	87.472	ENSODEG00000008020	SFSWAP	92	87.130	Octodon_degus
ENSLAFG00000014462	SFSWAP	99	51.113	ENSONIG00000003757	sfswap	76	63.838	Oreochromis_niloticus
ENSLAFG00000014462	SFSWAP	100	82.877	ENSOANG00000013861	SFSWAP	100	84.703	Ornithorhynchus_anatinus
ENSLAFG00000014462	SFSWAP	89	88.674	ENSOGAG00000016724	SFSWAP	91	88.288	Otolemur_garnettii
ENSLAFG00000014462	SFSWAP	100	88.141	ENSOARG00000014314	SFSWAP	92	88.141	Ovis_aries
ENSLAFG00000014462	SFSWAP	100	89.330	ENSPPAG00000036706	SFSWAP	92	89.103	Pan_paniscus
ENSLAFG00000014462	SFSWAP	98	73.953	ENSPTIG00000004304	SFSWAP	88	88.991	Panthera_tigris_altaica
ENSLAFG00000014462	SFSWAP	100	89.330	ENSPTRG00000005640	SFSWAP	92	89.103	Pan_troglodytes
ENSLAFG00000014462	SFSWAP	100	89.636	ENSPANG00000019737	SFSWAP	92	89.408	Papio_anubis
ENSLAFG00000014462	SFSWAP	66	65.190	ENSPSIG00000017807	SFSWAP	100	69.462	Pelodiscus_sinensis
ENSLAFG00000014462	SFSWAP	100	84.036	ENSPEMG00000001237	Sfswap	92	83.124	Peromyscus_maniculatus_bairdii
ENSLAFG00000014462	SFSWAP	98	88.760	ENSPPYG00000005129	SFSWAP	92	88.528	Pongo_abelii
ENSLAFG00000014462	SFSWAP	54	87.810	ENSPCAG00000004977	-	56	88.101	Procavia_capensis
ENSLAFG00000014462	SFSWAP	52	92.674	ENSPCOG00000023786	SFSWAP	92	88.952	Propithecus_coquereli
ENSLAFG00000014462	SFSWAP	91	86.056	ENSPVAG00000014918	SFSWAP	84	83.466	Pteropus_vampyrus
ENSLAFG00000014462	SFSWAP	73	58.788	ENSPNYG00000012660	sfswap	51	67.278	Pundamilia_nyererei
ENSLAFG00000014462	SFSWAP	100	82.991	ENSRNOG00000000931	Sfswap	99	83.838	Rattus_norvegicus
ENSLAFG00000014462	SFSWAP	100	81.414	ENSRBIG00000036330	SFSWAP	83	93.884	Rhinopithecus_bieti
ENSLAFG00000014462	SFSWAP	100	89.636	ENSRROG00000032001	SFSWAP	92	89.294	Rhinopithecus_roxellana
ENSLAFG00000014462	SFSWAP	100	87.713	ENSSBOG00000026217	SFSWAP	92	87.031	Saimiri_boliviensis_boliviensis
ENSLAFG00000014462	SFSWAP	100	83.918	ENSSHAG00000014232	SFSWAP	100	83.918	Sarcophilus_harrisii
ENSLAFG00000014462	SFSWAP	76	57.709	ENSSMAG00000018718	sfswap	51	46.801	Scophthalmus_maximus
ENSLAFG00000014462	SFSWAP	97	56.474	ENSSLDG00000010835	sfswap	78	66.471	Seriola_lalandi_dorsalis
ENSLAFG00000014462	SFSWAP	85	90.000	ENSSARG00000000424	SFSWAP	85	90.000	Sorex_araneus
ENSLAFG00000014462	SFSWAP	99	73.123	ENSSPUG00000010272	SFSWAP	60	74.239	Sphenodon_punctatus
ENSLAFG00000014462	SFSWAP	73	60.611	ENSSPAG00000014310	sfswap	50	68.693	Stegastes_partitus
ENSLAFG00000014462	SFSWAP	100	88.597	ENSSSCG00000009744	SFSWAP	92	88.027	Sus_scrofa
ENSLAFG00000014462	SFSWAP	100	78.864	ENSTGUG00000004623	SFSWAP	95	78.977	Taeniopygia_guttata
ENSLAFG00000014462	SFSWAP	55	87.456	ENSTBEG00000004983	-	60	87.456	Tupaia_belangeri
ENSLAFG00000014462	SFSWAP	100	77.753	ENSTTRG00000013478	SFSWAP	83	93.578	Tursiops_truncatus
ENSLAFG00000014462	SFSWAP	100	85.452	ENSUAMG00000016807	SFSWAP	92	85.452	Ursus_americanus
ENSLAFG00000014462	SFSWAP	90	79.464	ENSUMAG00000002957	SFSWAP	83	77.792	Ursus_maritimus
ENSLAFG00000014462	SFSWAP	53	94.737	ENSVPAG00000010479	-	55	94.118	Vicugna_pacos
ENSLAFG00000014462	SFSWAP	100	86.842	ENSVVUG00000010753	SFSWAP	92	85.682	Vulpes_vulpes
ENSLAFG00000014462	SFSWAP	100	59.405	ENSXETG00000009350	sfswap	87	65.419	Xenopus_tropicalis