EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000014473 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 45776 bases
Position: chrscaffold_73:5020215-5065990
Accession: 29190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000027976	Ago_hook	PF10427.9	1.2e-18	1	1
ENSLAFP00000021666	Ago_hook	PF10427.9	1.4e-18	1	1
ENSLAFP00000012132	Ago_hook	PF10427.9	7.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000034883	TNRC6B-203	4293	-	ENSLAFP00000027976	1431 (aa)	-	G3UJG7
ENSLAFT00000014478	TNRC6B-202	2394	-	ENSLAFP00000012132	797 (aa)	-	G3TDB7
ENSLAFT00000034701	TNRC6B-201	4116	-	ENSLAFP00000021666	1371 (aa)	-	G3U1F8

Gene Model

Click here to download ENSLAFG00000014473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000014473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000014473	TNRC6B	96	41.355	ENSLAFG00000011122	TNRC6C	77	38.221
ENSLAFG00000014473	TNRC6B	97	42.754	ENSLAFG00000004209	TNRC6A	72	39.674

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000014473	TNRC6B	100	96.653	ENSG00000100354	TNRC6B	90	96.397	Homo_sapiens
ENSLAFG00000014473	TNRC6B	100	96.653	ENSAMEG00000011025	TNRC6B	78	96.653	Ailuropoda_melanoleuca
ENSLAFG00000014473	TNRC6B	97	92.416	ENSAPLG00000009347	TNRC6B	78	84.677	Anas_platyrhynchos
ENSLAFG00000014473	TNRC6B	100	84.889	ENSACAG00000007281	TNRC6B	77	82.327	Anolis_carolinensis
ENSLAFG00000014473	TNRC6B	100	96.722	ENSANAG00000035042	TNRC6B	82	96.213	Aotus_nancymaae
ENSLAFG00000014473	TNRC6B	99	47.577	ENSAMXG00000008707	tnrc6b	59	46.776	Astyanax_mexicanus
ENSLAFG00000014473	TNRC6B	100	95.688	ENSBTAG00000021076	TNRC6B	78	95.688	Bos_taurus
ENSLAFG00000014473	TNRC6B	100	96.307	ENSCJAG00000002732	TNRC6B	81	98.310	Callithrix_jacchus
ENSLAFG00000014473	TNRC6B	100	96.319	ENSCAFG00000001255	TNRC6B	78	96.319	Canis_familiaris
ENSLAFG00000014473	TNRC6B	100	95.690	ENSCAFG00020002189	TNRC6B	77	96.442	Canis_lupus_dingo
ENSLAFG00000014473	TNRC6B	100	95.438	ENSCHIG00000003491	TNRC6B	78	94.840	Capra_hircus
ENSLAFG00000014473	TNRC6B	100	96.648	ENSTSYG00000011836	TNRC6B	82	96.441	Carlito_syrichta
ENSLAFG00000014473	TNRC6B	99	94.851	ENSCPOG00000005705	TNRC6B	78	94.851	Cavia_porcellus
ENSLAFG00000014473	TNRC6B	100	95.255	ENSCCAG00000019912	TNRC6B	82	93.602	Cebus_capucinus
ENSLAFG00000014473	TNRC6B	100	96.022	ENSCATG00000029291	TNRC6B	82	95.142	Cercocebus_atys
ENSLAFG00000014473	TNRC6B	99	95.788	ENSCLAG00000016942	TNRC6B	76	95.788	Chinchilla_lanigera
ENSLAFG00000014473	TNRC6B	99	91.134	ENSCSAG00000006021	TNRC6B	77	90.843	Chlorocebus_sabaeus
ENSLAFG00000014473	TNRC6B	67	96.703	ENSCHOG00000010004	-	57	96.703	Choloepus_hoffmanni
ENSLAFG00000014473	TNRC6B	91	87.082	ENSCPBG00000022932	TNRC6B	77	86.414	Chrysemys_picta_bellii
ENSLAFG00000014473	TNRC6B	100	96.581	ENSCANG00000030776	TNRC6B	82	95.853	Colobus_angolensis_palliatus
ENSLAFG00000014473	TNRC6B	95	93.969	ENSCGRG00001020166	Tnrc6b	75	93.664	Cricetulus_griseus_chok1gshd
ENSLAFG00000014473	TNRC6B	100	92.980	ENSCGRG00000016696	Tnrc6b	77	93.682	Cricetulus_griseus_crigri
ENSLAFG00000014473	TNRC6B	100	96.376	ENSDNOG00000012744	TNRC6B	78	96.376	Dasypus_novemcinctus
ENSLAFG00000014473	TNRC6B	100	95.173	ENSDORG00000003386	Tnrc6b	76	94.902	Dipodomys_ordii
ENSLAFG00000014473	TNRC6B	99	83.285	ENSETEG00000006570	TNRC6B	77	83.285	Echinops_telfairi
ENSLAFG00000014473	TNRC6B	100	96.054	ENSEASG00005005306	TNRC6B	78	96.594	Equus_asinus_asinus
ENSLAFG00000014473	TNRC6B	100	96.938	ENSECAG00000009759	TNRC6B	78	96.667	Equus_caballus
ENSLAFG00000014473	TNRC6B	75	95.238	ENSEEUG00000008690	-	52	95.238	Erinaceus_europaeus
ENSLAFG00000014473	TNRC6B	71	63.907	ENSELUG00000019468	-	71	64.000	Esox_lucius
ENSLAFG00000014473	TNRC6B	99	96.319	ENSFCAG00000004791	TNRC6B	78	96.319	Felis_catus
ENSLAFG00000014473	TNRC6B	100	90.394	ENSFALG00000012195	TNRC6B	81	88.397	Ficedula_albicollis
ENSLAFG00000014473	TNRC6B	99	95.058	ENSFDAG00000021368	TNRC6B	76	95.058	Fukomys_damarensis
ENSLAFG00000014473	TNRC6B	100	90.875	ENSGALG00000012050	TNRC6B	76	89.107	Gallus_gallus
ENSLAFG00000014473	TNRC6B	100	89.093	ENSGAGG00000025188	TNRC6B	77	88.464	Gopherus_agassizii
ENSLAFG00000014473	TNRC6B	100	96.583	ENSGGOG00000008444	TNRC6B	82	96.095	Gorilla_gorilla
ENSLAFG00000014473	TNRC6B	100	94.452	ENSHGLG00000009306	TNRC6B	80	94.244	Heterocephalus_glaber_female
ENSLAFG00000014473	TNRC6B	100	94.431	ENSHGLG00100018108	TNRC6B	77	94.902	Heterocephalus_glaber_male
ENSLAFG00000014473	TNRC6B	99	48.829	ENSIPUG00000001515	tnrc6b	73	50.000	Ictalurus_punctatus
ENSLAFG00000014473	TNRC6B	100	95.421	ENSSTOG00000008927	TNRC6B	76	96.213	Ictidomys_tridecemlineatus
ENSLAFG00000014473	TNRC6B	100	93.465	ENSJJAG00000015779	Tnrc6b	76	93.605	Jaculus_jaculus
ENSLAFG00000014473	TNRC6B	99	59.731	ENSLACG00000000628	-	77	60.156	Latimeria_chalumnae
ENSLAFG00000014473	TNRC6B	100	96.159	ENSMFAG00000003862	TNRC6B	82	95.261	Macaca_fascicularis
ENSLAFG00000014473	TNRC6B	100	95.684	ENSMMUG00000021345	TNRC6B	82	96.327	Macaca_mulatta
ENSLAFG00000014473	TNRC6B	100	96.035	ENSMNEG00000042745	TNRC6B	78	96.720	Macaca_nemestrina
ENSLAFG00000014473	TNRC6B	100	96.720	ENSMLEG00000041780	TNRC6B	82	96.327	Mandrillus_leucophaeus
ENSLAFG00000014473	TNRC6B	100	89.554	ENSMGAG00000012333	TNRC6B	78	88.788	Meleagris_gallopavo
ENSLAFG00000014473	TNRC6B	100	93.473	ENSMAUG00000016123	Tnrc6b	76	94.045	Mesocricetus_auratus
ENSLAFG00000014473	TNRC6B	100	96.170	ENSMICG00000014056	TNRC6B	82	95.868	Microcebus_murinus
ENSLAFG00000014473	TNRC6B	96	94.000	ENSMOCG00000020334	Tnrc6b	75	94.000	Microtus_ochrogaster
ENSLAFG00000014473	TNRC6B	77	54.922	ENSMMOG00000002799	si:dkey-217f16.6	80	55.820	Mola_mola
ENSLAFG00000014473	TNRC6B	99	94.113	MGP_CAROLIEiJ_G0020043	Tnrc6b	76	94.041	Mus_caroli
ENSLAFG00000014473	TNRC6B	99	94.259	ENSMUSG00000047888	Tnrc6b	99	88.944	Mus_musculus
ENSLAFG00000014473	TNRC6B	100	93.103	MGP_PahariEiJ_G0020045	Tnrc6b	76	93.895	Mus_pahari
ENSLAFG00000014473	TNRC6B	100	94.363	MGP_SPRETEiJ_G0020941	Tnrc6b	77	94.294	Mus_spretus
ENSLAFG00000014473	TNRC6B	97	96.183	ENSMPUG00000016442	TNRC6B	79	91.756	Mustela_putorius_furo
ENSLAFG00000014473	TNRC6B	100	96.022	ENSMLUG00000008765	TNRC6B	78	96.022	Myotis_lucifugus
ENSLAFG00000014473	TNRC6B	100	93.252	ENSNGAG00000021294	Tnrc6b	76	93.551	Nannospalax_galili
ENSLAFG00000014473	TNRC6B	100	95.690	ENSNLEG00000015311	TNRC6B	82	96.331	Nomascus_leucogenys
ENSLAFG00000014473	TNRC6B	98	92.668	ENSOPRG00000012054	TNRC6B	75	90.212	Ochotona_princeps
ENSLAFG00000014473	TNRC6B	99	95.283	ENSODEG00000013146	TNRC6B	76	95.283	Octodon_degus
ENSLAFG00000014473	TNRC6B	99	47.777	ENSONIG00000019679	-	77	43.715	Oreochromis_niloticus
ENSLAFG00000014473	TNRC6B	100	95.426	ENSOCUG00000016128	TNRC6B	76	96.361	Oryctolagus_cuniculus
ENSLAFG00000014473	TNRC6B	100	96.521	ENSOGAG00000011096	TNRC6B	78	96.521	Otolemur_garnettii
ENSLAFG00000014473	TNRC6B	100	94.275	ENSOARG00000017238	TNRC6B	76	94.949	Ovis_aries
ENSLAFG00000014473	TNRC6B	100	96.722	ENSPPAG00000028514	TNRC6B	82	95.735	Pan_paniscus
ENSLAFG00000014473	TNRC6B	100	95.936	ENSPPRG00000017741	TNRC6B	82	96.458	Panthera_pardus
ENSLAFG00000014473	TNRC6B	99	92.517	ENSPTIG00000022064	TNRC6B	82	90.166	Panthera_tigris_altaica
ENSLAFG00000014473	TNRC6B	100	96.720	ENSPTRG00000047826	TNRC6B	82	96.327	Pan_troglodytes
ENSLAFG00000014473	TNRC6B	100	87.579	ENSPANG00000009271	TNRC6B	82	86.381	Papio_anubis
ENSLAFG00000014473	TNRC6B	100	88.712	ENSPSIG00000005318	TNRC6B	77	87.980	Pelodiscus_sinensis
ENSLAFG00000014473	TNRC6B	99	93.619	ENSPEMG00000011403	Tnrc6b	76	93.546	Peromyscus_maniculatus_bairdii
ENSLAFG00000014473	TNRC6B	100	90.295	ENSPCIG00000020347	TNRC6B	79	88.341	Phascolarctos_cinereus
ENSLAFG00000014473	TNRC6B	99	44.913	ENSPFOG00000006033	-	58	49.808	Poecilia_formosa
ENSLAFG00000014473	TNRC6B	99	47.782	ENSPLAG00000001418	-	53	49.116	Poecilia_latipinna
ENSLAFG00000014473	TNRC6B	83	55.450	ENSPMEG00000006371	-	68	55.213	Poecilia_mexicana
ENSLAFG00000014473	TNRC6B	97	95.558	ENSPPYG00000011849	TNRC6B	81	93.305	Pongo_abelii
ENSLAFG00000014473	TNRC6B	97	87.944	ENSPCAG00000008739	TNRC6B	53	94.355	Procavia_capensis
ENSLAFG00000014473	TNRC6B	100	96.379	ENSPCOG00000020790	TNRC6B	82	96.222	Propithecus_coquereli
ENSLAFG00000014473	TNRC6B	91	96.615	ENSPVAG00000004975	TNRC6B	69	96.615	Pteropus_vampyrus
ENSLAFG00000014473	TNRC6B	87	51.867	ENSPNAG00000011713	tnrc6b	54	47.241	Pygocentrus_nattereri
ENSLAFG00000014473	TNRC6B	99	93.290	ENSRNOG00000024907	Tnrc6b	76	92.929	Rattus_norvegicus
ENSLAFG00000014473	TNRC6B	100	96.511	ENSRBIG00000035576	TNRC6B	83	96.090	Rhinopithecus_bieti
ENSLAFG00000014473	TNRC6B	100	96.441	ENSRROG00000031135	TNRC6B	82	95.972	Rhinopithecus_roxellana
ENSLAFG00000014473	TNRC6B	100	96.655	ENSSBOG00000029743	TNRC6B	84	96.213	Saimiri_boliviensis_boliviensis
ENSLAFG00000014473	TNRC6B	100	89.236	ENSSHAG00000009692	TNRC6B	79	89.167	Sarcophilus_harrisii
ENSLAFG00000014473	TNRC6B	81	84.749	ENSSARG00000007971	-	63	95.455	Sorex_araneus
ENSLAFG00000014473	TNRC6B	100	88.432	ENSSPUG00000010801	TNRC6B	85	87.805	Sphenodon_punctatus
ENSLAFG00000014473	TNRC6B	100	96.653	ENSSSCG00000000078	TNRC6B	77	96.653	Sus_scrofa
ENSLAFG00000014473	TNRC6B	83	91.505	ENSTGUG00000010138	-	75	82.740	Taeniopygia_guttata
ENSLAFG00000014473	TNRC6B	93	97.320	ENSTTRG00000011465	TNRC6B	73	96.482	Tursiops_truncatus
ENSLAFG00000014473	TNRC6B	100	95.449	ENSUAMG00000007174	TNRC6B	77	96.444	Ursus_americanus
ENSLAFG00000014473	TNRC6B	100	95.449	ENSUMAG00000014336	TNRC6B	81	96.444	Ursus_maritimus
ENSLAFG00000014473	TNRC6B	100	96.384	ENSVVUG00000007064	TNRC6B	78	96.090	Vulpes_vulpes
ENSLAFG00000014473	TNRC6B	87	49.330	ENSXCOG00000003042	-	53	50.341	Xiphophorus_couchianus