EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000014624 (Gene tree)
Gene ID: -
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 86366 bases
Position: chrscaffold_19:5802281-5888646
Accession: 100654986
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000012257	XRN_N	PF03159.18	9.5e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000014634	XRN2-201	2853	-	ENSLAFP00000012257	950 (aa)	XP_003411764	G3TDK6

Gene Model

Click here to download ENSLAFG00000014624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000014624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000014624	XRN2	71	41.329	ENSLAFG00000015426	XRN1	100	41.185

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000014624	XRN2	100	96.316	ENSG00000088930	XRN2	100	96.316	Homo_sapiens
ENSLAFG00000014624	XRN2	97	71.489	ENSAPOG00000009818	xrn2	100	70.336	Acanthochromis_polyacanthus
ENSLAFG00000014624	XRN2	100	97.158	ENSAMEG00000012581	XRN2	100	97.158	Ailuropoda_melanoleuca
ENSLAFG00000014624	XRN2	90	70.762	ENSACIG00000015047	xrn2	95	74.856	Amphilophus_citrinellus
ENSLAFG00000014624	XRN2	97	71.688	ENSAOCG00000023632	xrn2	100	70.558	Amphiprion_ocellaris
ENSLAFG00000014624	XRN2	97	71.520	ENSAPEG00000014871	xrn2	100	70.367	Amphiprion_percula
ENSLAFG00000014624	XRN2	95	72.048	ENSATEG00000001273	xrn2	97	71.353	Anabas_testudineus
ENSLAFG00000014624	XRN2	97	82.454	ENSAPLG00000013869	XRN2	99	82.885	Anas_platyrhynchos
ENSLAFG00000014624	XRN2	100	80.228	ENSACAG00000005565	XRN2	100	80.228	Anolis_carolinensis
ENSLAFG00000014624	XRN2	100	96.105	ENSANAG00000020126	XRN2	100	96.105	Aotus_nancymaae
ENSLAFG00000014624	XRN2	90	73.788	ENSACLG00000010522	xrn2	96	76.667	Astatotilapia_calliptera
ENSLAFG00000014624	XRN2	100	71.152	ENSAMXG00000018301	xrn2	100	71.152	Astyanax_mexicanus
ENSLAFG00000014624	XRN2	100	94.427	ENSBTAG00000011304	XRN2	100	94.427	Bos_taurus
ENSLAFG00000014624	XRN2	87	55.698	WBGene00006964	xrn-2	88	55.594	Caenorhabditis_elegans
ENSLAFG00000014624	XRN2	100	96.316	ENSCJAG00000005611	XRN2	100	96.316	Callithrix_jacchus
ENSLAFG00000014624	XRN2	100	96.842	ENSCAFG00000005185	XRN2	100	96.842	Canis_familiaris
ENSLAFG00000014624	XRN2	100	96.842	ENSCAFG00020027479	XRN2	100	96.842	Canis_lupus_dingo
ENSLAFG00000014624	XRN2	100	94.637	ENSCHIG00000006921	XRN2	100	94.637	Capra_hircus
ENSLAFG00000014624	XRN2	100	95.789	ENSTSYG00000008315	XRN2	100	95.789	Carlito_syrichta
ENSLAFG00000014624	XRN2	97	80.906	ENSCAPG00000010773	XRN2	99	80.259	Cavia_aperea
ENSLAFG00000014624	XRN2	100	96.105	ENSCPOG00000009407	XRN2	100	96.105	Cavia_porcellus
ENSLAFG00000014624	XRN2	100	96.421	ENSCATG00000040350	XRN2	100	96.421	Cercocebus_atys
ENSLAFG00000014624	XRN2	100	96.105	ENSCLAG00000013419	XRN2	100	96.105	Chinchilla_lanigera
ENSLAFG00000014624	XRN2	100	96.421	ENSCSAG00000011094	XRN2	100	96.421	Chlorocebus_sabaeus
ENSLAFG00000014624	XRN2	68	99.462	ENSCHOG00000013404	XRN2	70	99.462	Choloepus_hoffmanni
ENSLAFG00000014624	XRN2	100	84.375	ENSCPBG00000023533	XRN2	100	85.000	Chrysemys_picta_bellii
ENSLAFG00000014624	XRN2	86	59.905	ENSCING00000022336	-	100	60.263	Ciona_intestinalis
ENSLAFG00000014624	XRN2	87	58.950	ENSCSAVG00000011217	-	100	61.597	Ciona_savignyi
ENSLAFG00000014624	XRN2	100	96.421	ENSCANG00000040240	XRN2	100	96.421	Colobus_angolensis_palliatus
ENSLAFG00000014624	XRN2	98	95.371	ENSCGRG00001010676	Xrn2	99	95.371	Cricetulus_griseus_chok1gshd
ENSLAFG00000014624	XRN2	97	94.498	ENSCGRG00000006378	Xrn2	99	94.498	Cricetulus_griseus_crigri
ENSLAFG00000014624	XRN2	54	72.549	ENSCSEG00000005628	xrn2	100	72.549	Cynoglossus_semilaevis
ENSLAFG00000014624	XRN2	89	71.757	ENSCVAG00000018999	xrn2	98	77.143	Cyprinodon_variegatus
ENSLAFG00000014624	XRN2	100	69.918	ENSDARG00000101900	xrn2	96	78.011	Danio_rerio
ENSLAFG00000014624	XRN2	100	96.105	ENSDNOG00000001895	XRN2	100	96.105	Dasypus_novemcinctus
ENSLAFG00000014624	XRN2	100	93.789	ENSDORG00000005434	Xrn2	100	93.789	Dipodomys_ordii
ENSLAFG00000014624	XRN2	87	56.287	FBgn0031868	Rat1	88	55.875	Drosophila_melanogaster
ENSLAFG00000014624	XRN2	100	83.579	ENSETEG00000001740	XRN2	100	83.579	Echinops_telfairi
ENSLAFG00000014624	XRN2	84	71.394	ENSEBUG00000016136	xrn2	100	71.394	Eptatretus_burgeri
ENSLAFG00000014624	XRN2	100	96.421	ENSEASG00005002484	XRN2	100	96.421	Equus_asinus_asinus
ENSLAFG00000014624	XRN2	99	96.621	ENSECAG00000018988	XRN2	96	100.000	Equus_caballus
ENSLAFG00000014624	XRN2	80	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSLAFG00000014624	XRN2	100	70.799	ENSELUG00000000552	xrn2	100	71.209	Esox_lucius
ENSLAFG00000014624	XRN2	100	97.158	ENSFCAG00000007970	XRN2	100	97.158	Felis_catus
ENSLAFG00000014624	XRN2	100	82.075	ENSFALG00000004508	XRN2	100	82.495	Ficedula_albicollis
ENSLAFG00000014624	XRN2	100	95.789	ENSFDAG00000016311	XRN2	100	95.789	Fukomys_damarensis
ENSLAFG00000014624	XRN2	54	70.038	ENSFHEG00000013039	xrn2	98	70.038	Fundulus_heteroclitus
ENSLAFG00000014624	XRN2	86	73.147	ENSGMOG00000013436	xrn2	100	73.147	Gadus_morhua
ENSLAFG00000014624	XRN2	100	81.885	ENSGALG00000008372	XRN2	100	81.885	Gallus_gallus
ENSLAFG00000014624	XRN2	89	74.070	ENSGAFG00000014284	xrn2	98	74.070	Gambusia_affinis
ENSLAFG00000014624	XRN2	87	74.760	ENSGACG00000011870	xrn2	100	74.760	Gasterosteus_aculeatus
ENSLAFG00000014624	XRN2	100	84.167	ENSGAGG00000004884	XRN2	100	84.792	Gopherus_agassizii
ENSLAFG00000014624	XRN2	100	96.316	ENSGGOG00000013738	XRN2	100	96.316	Gorilla_gorilla
ENSLAFG00000014624	XRN2	54	74.472	ENSHBUG00000005077	xrn2	96	76.667	Haplochromis_burtoni
ENSLAFG00000014624	XRN2	100	94.737	ENSHGLG00000014831	XRN2	100	94.526	Heterocephalus_glaber_female
ENSLAFG00000014624	XRN2	100	94.737	ENSHGLG00100013130	XRN2	100	94.526	Heterocephalus_glaber_male
ENSLAFG00000014624	XRN2	99	67.915	ENSHCOG00000011994	xrn2	99	68.983	Hippocampus_comes
ENSLAFG00000014624	XRN2	100	69.623	ENSIPUG00000006639	xrn2	100	69.623	Ictalurus_punctatus
ENSLAFG00000014624	XRN2	100	96.211	ENSSTOG00000000589	XRN2	100	96.211	Ictidomys_tridecemlineatus
ENSLAFG00000014624	XRN2	100	95.158	ENSJJAG00000022128	Xrn2	100	95.158	Jaculus_jaculus
ENSLAFG00000014624	XRN2	54	79.883	ENSLBEG00000010041	xrn2	100	79.883	Labrus_bergylta
ENSLAFG00000014624	XRN2	94	76.752	ENSLACG00000008307	XRN2	99	79.141	Latimeria_chalumnae
ENSLAFG00000014624	XRN2	99	73.222	ENSLOCG00000016874	xrn2	100	73.222	Lepisosteus_oculatus
ENSLAFG00000014624	XRN2	100	96.421	ENSMFAG00000038122	XRN2	100	96.421	Macaca_fascicularis
ENSLAFG00000014624	XRN2	100	96.421	ENSMMUG00000011405	XRN2	100	96.421	Macaca_mulatta
ENSLAFG00000014624	XRN2	100	96.526	ENSMNEG00000040626	XRN2	100	96.526	Macaca_nemestrina
ENSLAFG00000014624	XRN2	100	96.316	ENSMLEG00000041897	XRN2	100	96.316	Mandrillus_leucophaeus
ENSLAFG00000014624	XRN2	95	73.014	ENSMAMG00000008633	xrn2	98	71.488	Mastacembelus_armatus
ENSLAFG00000014624	XRN2	90	75.751	ENSMZEG00005022362	xrn2	97	75.751	Maylandia_zebra
ENSLAFG00000014624	XRN2	99	80.417	ENSMGAG00000003196	XRN2	99	80.417	Meleagris_gallopavo
ENSLAFG00000014624	XRN2	100	95.368	ENSMAUG00000021842	Xrn2	100	95.368	Mesocricetus_auratus
ENSLAFG00000014624	XRN2	100	95.158	ENSMICG00000008126	XRN2	100	95.158	Microcebus_murinus
ENSLAFG00000014624	XRN2	100	94.842	ENSMOCG00000012588	Xrn2	100	94.842	Microtus_ochrogaster
ENSLAFG00000014624	XRN2	89	74.112	ENSMMOG00000017576	xrn2	96	75.000	Mola_mola
ENSLAFG00000014624	XRN2	100	90.421	ENSMODG00000006163	XRN2	100	90.421	Monodelphis_domestica
ENSLAFG00000014624	XRN2	91	72.472	ENSMALG00000011355	xrn2	95	76.482	Monopterus_albus
ENSLAFG00000014624	XRN2	100	94.217	MGP_CAROLIEiJ_G0024400	Xrn2	100	94.217	Mus_caroli
ENSLAFG00000014624	XRN2	100	94.427	ENSMUSG00000027433	Xrn2	100	94.427	Mus_musculus
ENSLAFG00000014624	XRN2	100	94.217	MGP_PahariEiJ_G0025843	Xrn2	100	94.217	Mus_pahari
ENSLAFG00000014624	XRN2	100	94.427	MGP_SPRETEiJ_G0025318	Xrn2	100	94.427	Mus_spretus
ENSLAFG00000014624	XRN2	100	95.243	ENSMPUG00000001198	XRN2	93	95.243	Mustela_putorius_furo
ENSLAFG00000014624	XRN2	100	96.105	ENSMLUG00000001536	XRN2	100	96.105	Myotis_lucifugus
ENSLAFG00000014624	XRN2	100	95.579	ENSNGAG00000018138	Xrn2	100	95.579	Nannospalax_galili
ENSLAFG00000014624	XRN2	90	75.954	ENSNBRG00000008062	xrn2	97	75.954	Neolamprologus_brichardi
ENSLAFG00000014624	XRN2	100	96.316	ENSNLEG00000009991	XRN2	100	96.316	Nomascus_leucogenys
ENSLAFG00000014624	XRN2	66	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSLAFG00000014624	XRN2	75	79.058	ENSOPRG00000001397	-	77	79.058	Ochotona_princeps
ENSLAFG00000014624	XRN2	98	86.516	ENSODEG00000000860	-	99	86.947	Octodon_degus
ENSLAFG00000014624	XRN2	100	95.579	ENSODEG00000010745	-	100	95.579	Octodon_degus
ENSLAFG00000014624	XRN2	100	71.885	ENSONIG00000018720	xrn2	100	72.091	Oreochromis_niloticus
ENSLAFG00000014624	XRN2	100	90.546	ENSOANG00000015673	XRN2	100	90.546	Ornithorhynchus_anatinus
ENSLAFG00000014624	XRN2	100	96.211	ENSOCUG00000013468	XRN2	100	96.211	Oryctolagus_cuniculus
ENSLAFG00000014624	XRN2	98	70.717	ENSORLG00000017213	xrn2	97	75.404	Oryzias_latipes
ENSLAFG00000014624	XRN2	98	70.717	ENSORLG00020001824	xrn2	100	70.306	Oryzias_latipes_hni
ENSLAFG00000014624	XRN2	98	70.509	ENSORLG00015019747	xrn2	100	70.204	Oryzias_latipes_hsok
ENSLAFG00000014624	XRN2	90	74.480	ENSOMEG00000019820	xrn2	100	69.675	Oryzias_melastigma
ENSLAFG00000014624	XRN2	100	95.268	ENSOGAG00000001068	XRN2	100	95.268	Otolemur_garnettii
ENSLAFG00000014624	XRN2	97	94.492	ENSOARG00000004443	XRN2	100	94.492	Ovis_aries
ENSLAFG00000014624	XRN2	100	96.316	ENSPPAG00000033549	XRN2	100	96.316	Pan_paniscus
ENSLAFG00000014624	XRN2	100	97.158	ENSPPRG00000008732	XRN2	100	97.158	Panthera_pardus
ENSLAFG00000014624	XRN2	97	97.081	ENSPTIG00000015683	XRN2	97	97.081	Panthera_tigris_altaica
ENSLAFG00000014624	XRN2	100	96.316	ENSPTRG00000013308	XRN2	100	96.316	Pan_troglodytes
ENSLAFG00000014624	XRN2	100	96.421	ENSPANG00000018088	XRN2	100	96.421	Papio_anubis
ENSLAFG00000014624	XRN2	100	70.829	ENSPKIG00000016889	xrn2	100	70.931	Paramormyrops_kingsleyae
ENSLAFG00000014624	XRN2	81	86.849	ENSPSIG00000014666	XRN2	100	86.849	Pelodiscus_sinensis
ENSLAFG00000014624	XRN2	100	94.842	ENSPEMG00000000111	Xrn2	100	94.842	Peromyscus_maniculatus_bairdii
ENSLAFG00000014624	XRN2	100	70.259	ENSPFOG00000004182	xrn2	99	70.661	Poecilia_formosa
ENSLAFG00000014624	XRN2	89	74.535	ENSPLAG00000007351	xrn2	96	74.535	Poecilia_latipinna
ENSLAFG00000014624	XRN2	94	68.770	ENSPMEG00000011798	xrn2	99	69.641	Poecilia_mexicana
ENSLAFG00000014624	XRN2	89	74.535	ENSPREG00000012452	xrn2	99	72.952	Poecilia_reticulata
ENSLAFG00000014624	XRN2	100	96.000	ENSPPYG00000010755	XRN2	100	96.000	Pongo_abelii
ENSLAFG00000014624	XRN2	100	91.387	ENSPCAG00000011191	XRN2	100	91.387	Procavia_capensis
ENSLAFG00000014624	XRN2	100	88.632	ENSPCOG00000016468	XRN2	100	88.632	Propithecus_coquereli
ENSLAFG00000014624	XRN2	93	92.401	ENSPVAG00000004596	XRN2	93	92.401	Pteropus_vampyrus
ENSLAFG00000014624	XRN2	90	73.788	ENSPNYG00000001765	xrn2	97	73.788	Pundamilia_nyererei
ENSLAFG00000014624	XRN2	100	71.735	ENSPNAG00000010956	xrn2	99	71.735	Pygocentrus_nattereri
ENSLAFG00000014624	XRN2	100	95.268	ENSRNOG00000011785	Xrn2	100	95.268	Rattus_norvegicus
ENSLAFG00000014624	XRN2	86	96.699	ENSRBIG00000036193	XRN2	100	96.699	Rhinopithecus_bieti
ENSLAFG00000014624	XRN2	100	96.421	ENSRROG00000044400	XRN2	90	96.421	Rhinopithecus_roxellana
ENSLAFG00000014624	XRN2	69	51.936	YOR048C	RAT1	63	53.477	Saccharomyces_cerevisiae
ENSLAFG00000014624	XRN2	100	96.211	ENSSBOG00000021014	XRN2	100	96.211	Saimiri_boliviensis_boliviensis
ENSLAFG00000014624	XRN2	100	71.930	ENSSFOG00015001091	xrn2	100	71.930	Scleropages_formosus
ENSLAFG00000014624	XRN2	92	73.363	ENSSMAG00000007834	xrn2	100	68.997	Scophthalmus_maximus
ENSLAFG00000014624	XRN2	91	72.398	ENSSDUG00000012802	xrn2	99	72.738	Seriola_dumerili
ENSLAFG00000014624	XRN2	93	74.266	ENSSLDG00000021273	xrn2	100	74.266	Seriola_lalandi_dorsalis
ENSLAFG00000014624	XRN2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSLAFG00000014624	XRN2	98	78.992	ENSSPUG00000005485	XRN2	96	79.100	Sphenodon_punctatus
ENSLAFG00000014624	XRN2	100	70.522	ENSSPAG00000016027	xrn2	99	70.522	Stegastes_partitus
ENSLAFG00000014624	XRN2	100	94.316	ENSSSCG00000007109	XRN2	100	94.316	Sus_scrofa
ENSLAFG00000014624	XRN2	100	81.002	ENSTGUG00000007535	XRN2	100	81.420	Taeniopygia_guttata
ENSLAFG00000014624	XRN2	100	67.677	ENSTRUG00000015489	xrn2	100	68.049	Takifugu_rubripes
ENSLAFG00000014624	XRN2	100	70.868	ENSTNIG00000010712	xrn2	100	70.868	Tetraodon_nigroviridis
ENSLAFG00000014624	XRN2	100	95.895	ENSTBEG00000004119	XRN2	100	95.895	Tupaia_belangeri
ENSLAFG00000014624	XRN2	93	97.117	ENSTTRG00000009087	XRN2	93	97.117	Tursiops_truncatus
ENSLAFG00000014624	XRN2	100	97.158	ENSUAMG00000024634	XRN2	100	97.158	Ursus_americanus
ENSLAFG00000014624	XRN2	97	96.865	ENSUMAG00000004012	XRN2	95	96.865	Ursus_maritimus
ENSLAFG00000014624	XRN2	89	89.112	ENSVPAG00000010694	XRN2	91	89.112	Vicugna_pacos
ENSLAFG00000014624	XRN2	100	96.947	ENSVVUG00000012178	XRN2	100	96.947	Vulpes_vulpes
ENSLAFG00000014624	XRN2	100	74.035	ENSXETG00000023501	xrn2	100	74.661	Xenopus_tropicalis
ENSLAFG00000014624	XRN2	100	68.654	ENSXMAG00000000242	xrn2	92	79.075	Xiphophorus_maculatus