EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000014993 (Gene tree)
Gene ID: -
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 8357 bases
Position: chrscaffold_99:164774-173130
Accession: 100657196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000012553	RRM_1	PF00076.22	8.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000014995	RBM42-201	1428	XM_003420757	ENSLAFP00000012553	475 (aa)	XP_003420805	G3TE98

Gene Model

Click here to download ENSLAFG00000014993's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000014993's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000014993	RBM42	99	91.667	ENSG00000126254	RBM42	98	94.904	Homo_sapiens
ENSLAFG00000014993	RBM42	99	95.616	ENSAMEG00000000524	RBM42	100	95.616	Ailuropoda_melanoleuca
ENSLAFG00000014993	RBM42	99	91.614	ENSANAG00000027537	RBM42	98	93.162	Aotus_nancymaae
ENSLAFG00000014993	RBM42	99	92.034	ENSBTAG00000013440	RBM42	98	93.162	Bos_taurus
ENSLAFG00000014993	RBM42	99	93.920	ENSCJAG00000010220	RBM42	92	98.485	Callithrix_jacchus
ENSLAFG00000014993	RBM42	99	85.954	ENSCAFG00020018628	RBM42	88	98.485	Canis_lupus_dingo
ENSLAFG00000014993	RBM42	99	91.405	ENSCHIG00000009518	RBM42	98	92.521	Capra_hircus
ENSLAFG00000014993	RBM42	99	95.397	ENSTSYG00000014688	RBM42	97	98.485	Carlito_syrichta
ENSLAFG00000014993	RBM42	80	94.041	ENSCAPG00000009566	RBM42	99	94.819	Cavia_aperea
ENSLAFG00000014993	RBM42	97	94.231	ENSCPOG00000012365	RBM42	97	92.735	Cavia_porcellus
ENSLAFG00000014993	RBM42	99	93.096	ENSCCAG00000034440	RBM42	98	93.376	Cebus_capucinus
ENSLAFG00000014993	RBM42	99	91.458	ENSCATG00000041924	RBM42	98	94.692	Cercocebus_atys
ENSLAFG00000014993	RBM42	97	90.812	ENSCLAG00000012865	RBM42	97	92.094	Chinchilla_lanigera
ENSLAFG00000014993	RBM42	99	88.750	ENSCSAG00000004422	RBM42	98	88.535	Chlorocebus_sabaeus
ENSLAFG00000014993	RBM42	99	86.134	ENSCANG00000030272	RBM42	100	86.134	Colobus_angolensis_palliatus
ENSLAFG00000014993	RBM42	100	91.232	ENSCGRG00001018540	Rbm42	97	90.364	Cricetulus_griseus_chok1gshd
ENSLAFG00000014993	RBM42	99	90.417	ENSDNOG00000037397	RBM42	98	92.357	Dasypus_novemcinctus
ENSLAFG00000014993	RBM42	94	90.869	ENSDORG00000013001	Rbm42	97	92.505	Dipodomys_ordii
ENSLAFG00000014993	RBM42	70	94.203	ENSETEG00000007878	RBM42	69	95.652	Echinops_telfairi
ENSLAFG00000014993	RBM42	99	89.518	ENSEASG00005001074	RBM42	98	87.366	Equus_asinus_asinus
ENSLAFG00000014993	RBM42	99	89.518	ENSECAG00000018215	RBM42	98	87.366	Equus_caballus
ENSLAFG00000014993	RBM42	99	95.807	ENSFCAG00000006376	RBM42	100	95.807	Felis_catus
ENSLAFG00000014993	RBM42	97	90.000	ENSFDAG00000007440	RBM42	97	91.471	Fukomys_damarensis
ENSLAFG00000014993	RBM42	99	91.667	ENSGGOG00000009972	RBM42	98	94.904	Gorilla_gorilla
ENSLAFG00000014993	RBM42	97	92.735	ENSHGLG00000008418	RBM42	97	91.006	Heterocephalus_glaber_female
ENSLAFG00000014993	RBM42	97	92.735	ENSHGLG00100018667	RBM42	97	91.006	Heterocephalus_glaber_male
ENSLAFG00000014993	RBM42	99	94.130	ENSSTOG00000013050	RBM42	98	92.094	Ictidomys_tridecemlineatus
ENSLAFG00000014993	RBM42	99	90.566	ENSJJAG00000010421	Rbm42	97	92.077	Jaculus_jaculus
ENSLAFG00000014993	RBM42	99	91.458	ENSMFAG00000002758	RBM42	98	94.692	Macaca_fascicularis
ENSLAFG00000014993	RBM42	99	91.458	ENSMMUG00000018954	RBM42	98	94.692	Macaca_mulatta
ENSLAFG00000014993	RBM42	100	90.625	ENSMNEG00000030009	RBM42	98	94.692	Macaca_nemestrina
ENSLAFG00000014993	RBM42	99	91.458	ENSMLEG00000036119	RBM42	98	94.692	Mandrillus_leucophaeus
ENSLAFG00000014993	RBM42	99	96.017	ENSMICG00000009880	RBM42	100	96.017	Microcebus_murinus
ENSLAFG00000014993	RBM42	100	91.042	ENSMOCG00000000405	Rbm42	97	89.722	Microtus_ochrogaster
ENSLAFG00000014993	RBM42	100	93.542	MGP_CAROLIEiJ_G0029536	Rbm42	97	92.505	Mus_caroli
ENSLAFG00000014993	RBM42	100	93.542	ENSMUSG00000036733	Rbm42	97	92.505	Mus_musculus
ENSLAFG00000014993	RBM42	100	90.833	MGP_PahariEiJ_G0012770	Rbm42	97	92.505	Mus_pahari
ENSLAFG00000014993	RBM42	100	93.542	MGP_SPRETEiJ_G0030632	Rbm42	97	92.505	Mus_spretus
ENSLAFG00000014993	RBM42	99	89.937	ENSMPUG00000006288	RBM42	98	87.607	Mustela_putorius_furo
ENSLAFG00000014993	RBM42	99	91.405	ENSMLUG00000011334	RBM42	98	93.162	Myotis_lucifugus
ENSLAFG00000014993	RBM42	100	94.363	ENSNGAG00000019698	Rbm42	97	92.934	Nannospalax_galili
ENSLAFG00000014993	RBM42	69	94.611	ENSNLEG00000011272	-	94	87.989	Nomascus_leucogenys
ENSLAFG00000014993	RBM42	95	79.826	ENSMEUG00000016300	RBM42	98	78.826	Notamacropus_eugenii
ENSLAFG00000014993	RBM42	99	91.387	ENSOPRG00000001229	RBM42	98	87.794	Ochotona_princeps
ENSLAFG00000014993	RBM42	100	91.042	ENSODEG00000013705	RBM42	97	92.308	Octodon_degus
ENSLAFG00000014993	RBM42	99	88.727	ENSOCUG00000003337	RBM42	98	87.872	Oryctolagus_cuniculus
ENSLAFG00000014993	RBM42	99	95.597	ENSOGAG00000004144	RBM42	100	95.597	Otolemur_garnettii
ENSLAFG00000014993	RBM42	97	88.197	ENSOARG00000004926	RBM42	96	89.270	Ovis_aries
ENSLAFG00000014993	RBM42	99	92.276	ENSPPAG00000037315	RBM42	98	93.590	Pan_paniscus
ENSLAFG00000014993	RBM42	99	95.807	ENSPPRG00000016784	RBM42	100	95.807	Panthera_pardus
ENSLAFG00000014993	RBM42	99	92.034	ENSPTIG00000019270	RBM42	97	98.485	Panthera_tigris_altaica
ENSLAFG00000014993	RBM42	99	91.667	ENSPTRG00000010852	RBM42	98	94.904	Pan_troglodytes
ENSLAFG00000014993	RBM42	99	91.195	ENSPANG00000017032	RBM42	92	98.485	Papio_anubis
ENSLAFG00000014993	RBM42	100	91.250	ENSPEMG00000012065	Rbm42	97	92.934	Peromyscus_maniculatus_bairdii
ENSLAFG00000014993	RBM42	99	90.515	ENSPPYG00000009871	RBM42	98	93.277	Pongo_abelii
ENSLAFG00000014993	RBM42	99	84.067	ENSPCAG00000013053	RBM42	98	80.300	Procavia_capensis
ENSLAFG00000014993	RBM42	99	96.436	ENSPCOG00000026433	-	100	96.436	Propithecus_coquereli
ENSLAFG00000014993	RBM42	69	95.495	ENSPCOG00000020672	RBM42	81	95.495	Propithecus_coquereli
ENSLAFG00000014993	RBM42	99	95.388	ENSPVAG00000012815	RBM42	100	95.388	Pteropus_vampyrus
ENSLAFG00000014993	RBM42	100	91.250	ENSRNOG00000024278	Rbm42	97	92.719	Rattus_norvegicus
ENSLAFG00000014993	RBM42	99	91.458	ENSRBIG00000007566	RBM42	98	94.692	Rhinopithecus_bieti
ENSLAFG00000014993	RBM42	99	92.243	ENSRROG00000042313	RBM42	98	93.376	Rhinopithecus_roxellana
ENSLAFG00000014993	RBM42	85	95.813	ENSSBOG00000030666	RBM42	100	95.813	Saimiri_boliviensis_boliviensis
ENSLAFG00000014993	RBM42	94	80.702	ENSSARG00000010724	RBM42	98	84.501	Sorex_araneus
ENSLAFG00000014993	RBM42	99	90.776	ENSSSCG00000002905	RBM42	98	92.521	Sus_scrofa
ENSLAFG00000014993	RBM42	99	95.807	ENSUAMG00000020711	RBM42	100	95.807	Ursus_americanus
ENSLAFG00000014993	RBM42	99	95.807	ENSUMAG00000020223	RBM42	100	95.807	Ursus_maritimus
ENSLAFG00000014993	RBM42	99	93.920	ENSVVUG00000015117	RBM42	98	91.667	Vulpes_vulpes