EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000015036 (Gene tree)
Gene ID: -
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 163624 bases
Position: chrscaffold_53:325206-488829
Accession: 8609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000012590	R3H	PF01424.22	3.7e-05	1	1
ENSLAFP00000012590	RNA_bind	PF08675.11	3e-33	1	1
ENSLAFP00000012590	CAF1	PF04857.20	3e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000015039	PARN-201	1893	-	ENSLAFP00000012590	631 (aa)	-	G3TEC9

Gene Model

Click here to download ENSLAFG00000015036's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000015036's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000015036	PARN	100	93.114	ENSG00000140694	PARN	100	98.305	Homo_sapiens
ENSLAFG00000015036	PARN	100	92.175	ENSAMEG00000011208	PARN	100	92.175	Ailuropoda_melanoleuca
ENSLAFG00000015036	PARN	84	75.933	ENSACIG00000000619	parn	83	75.933	Amphilophus_citrinellus
ENSLAFG00000015036	PARN	91	73.585	ENSAOCG00000003465	parn	83	73.585	Amphiprion_ocellaris
ENSLAFG00000015036	PARN	79	74.950	ENSAPEG00000010661	parn	95	75.506	Amphiprion_percula
ENSLAFG00000015036	PARN	99	69.183	ENSATEG00000004661	parn	83	75.304	Anabas_testudineus
ENSLAFG00000015036	PARN	99	83.570	ENSAPLG00000013914	PARN	99	83.570	Anas_platyrhynchos
ENSLAFG00000015036	PARN	100	76.462	ENSACAG00000004973	PARN	100	76.570	Anolis_carolinensis
ENSLAFG00000015036	PARN	100	92.488	ENSANAG00000031516	PARN	100	98.305	Aotus_nancymaae
ENSLAFG00000015036	PARN	92	74.530	ENSACLG00000004742	parn	85	74.530	Astatotilapia_calliptera
ENSLAFG00000015036	PARN	91	73.875	ENSAMXG00000012390	parn	94	71.527	Astyanax_mexicanus
ENSLAFG00000015036	PARN	100	90.125	ENSBTAG00000018097	PARN	100	92.201	Bos_taurus
ENSLAFG00000015036	PARN	100	92.645	ENSCJAG00000015866	PARN	100	98.305	Callithrix_jacchus
ENSLAFG00000015036	PARN	100	92.163	ENSCAFG00000018795	PARN	100	92.163	Canis_familiaris
ENSLAFG00000015036	PARN	100	92.163	ENSCAFG00020024126	PARN	100	92.163	Canis_lupus_dingo
ENSLAFG00000015036	PARN	100	93.260	ENSCHIG00000018143	PARN	100	93.260	Capra_hircus
ENSLAFG00000015036	PARN	74	61.954	ENSCAPG00000007984	PARN	78	61.954	Cavia_aperea
ENSLAFG00000015036	PARN	100	89.342	ENSCPOG00000002263	PARN	100	89.342	Cavia_porcellus
ENSLAFG00000015036	PARN	100	93.271	ENSCCAG00000030367	PARN	100	98.305	Cebus_capucinus
ENSLAFG00000015036	PARN	53	36.552	ENSCATG00000033196	PNLDC1	70	36.552	Cercocebus_atys
ENSLAFG00000015036	PARN	100	85.759	ENSCATG00000041368	PARN	100	98.305	Cercocebus_atys
ENSLAFG00000015036	PARN	100	89.812	ENSCLAG00000015406	PARN	99	89.812	Chinchilla_lanigera
ENSLAFG00000015036	PARN	100	93.271	ENSCSAG00000008142	PARN	100	93.271	Chlorocebus_sabaeus
ENSLAFG00000015036	PARN	99	76.704	ENSCHOG00000007014	PARN	100	76.704	Choloepus_hoffmanni
ENSLAFG00000015036	PARN	88	84.492	ENSCPBG00000006609	PARN	97	84.492	Chrysemys_picta_bellii
ENSLAFG00000015036	PARN	81	43.421	ENSCING00000010142	-	99	43.421	Ciona_intestinalis
ENSLAFG00000015036	PARN	100	81.003	ENSCANG00000028849	-	100	98.305	Colobus_angolensis_palliatus
ENSLAFG00000015036	PARN	100	85.601	ENSCGRG00001012096	Parn	100	85.601	Cricetulus_griseus_chok1gshd
ENSLAFG00000015036	PARN	100	85.601	ENSCGRG00000004939	Parn	100	85.601	Cricetulus_griseus_crigri
ENSLAFG00000015036	PARN	95	69.737	ENSCSEG00000002064	parn	100	64.706	Cynoglossus_semilaevis
ENSLAFG00000015036	PARN	84	77.425	ENSCVAG00000014848	parn	79	77.425	Cyprinodon_variegatus
ENSLAFG00000015036	PARN	94	67.381	ENSDARG00000102634	parn	92	67.381	Danio_rerio
ENSLAFG00000015036	PARN	100	93.103	ENSDNOG00000000833	PARN	100	93.103	Dasypus_novemcinctus
ENSLAFG00000015036	PARN	74	93.893	ENSETEG00000014828	-	77	93.893	Echinops_telfairi
ENSLAFG00000015036	PARN	100	92.633	ENSEASG00005011400	PARN	100	92.633	Equus_asinus_asinus
ENSLAFG00000015036	PARN	100	92.476	ENSECAG00000017792	PARN	100	92.476	Equus_caballus
ENSLAFG00000015036	PARN	86	83.258	ENSEEUG00000010370	PARN	86	83.258	Erinaceus_europaeus
ENSLAFG00000015036	PARN	90	73.438	ENSELUG00000013139	parn	75	73.438	Esox_lucius
ENSLAFG00000015036	PARN	100	93.417	ENSFCAG00000044961	PARN	100	98.305	Felis_catus
ENSLAFG00000015036	PARN	99	82.567	ENSFALG00000003911	PARN	98	82.567	Ficedula_albicollis
ENSLAFG00000015036	PARN	100	89.498	ENSFDAG00000009234	PARN	100	89.498	Fukomys_damarensis
ENSLAFG00000015036	PARN	92	66.047	ENSFHEG00000013738	parn	92	76.271	Fundulus_heteroclitus
ENSLAFG00000015036	PARN	84	76.119	ENSGMOG00000003231	parn	97	76.119	Gadus_morhua
ENSLAFG00000015036	PARN	100	81.505	ENSGALG00000003091	PARN	100	81.505	Gallus_gallus
ENSLAFG00000015036	PARN	90	73.739	ENSGAFG00000011061	parn	84	73.333	Gambusia_affinis
ENSLAFG00000015036	PARN	100	68.809	ENSGACG00000019501	parn	100	69.279	Gasterosteus_aculeatus
ENSLAFG00000015036	PARN	55	76.771	ENSGAGG00000023281	PARN	83	80.061	Gopherus_agassizii
ENSLAFG00000015036	PARN	97	93.237	ENSGGOG00000025224	PARN	100	98.305	Gorilla_gorilla
ENSLAFG00000015036	PARN	92	74.530	ENSHBUG00000017906	parn	90	77.281	Haplochromis_burtoni
ENSLAFG00000015036	PARN	100	89.342	ENSHGLG00000010886	PARN	100	89.342	Heterocephalus_glaber_female
ENSLAFG00000015036	PARN	100	89.342	ENSHGLG00100014659	PARN	100	89.342	Heterocephalus_glaber_male
ENSLAFG00000015036	PARN	83	73.724	ENSHCOG00000008683	parn	91	73.724	Hippocampus_comes
ENSLAFG00000015036	PARN	100	58.621	ENSIPUG00000012401	parn	84	62.937	Ictalurus_punctatus
ENSLAFG00000015036	PARN	100	90.125	ENSSTOG00000007519	PARN	100	90.125	Ictidomys_tridecemlineatus
ENSLAFG00000015036	PARN	100	88.906	ENSJJAG00000023049	Parn	100	88.906	Jaculus_jaculus
ENSLAFG00000015036	PARN	91	74.394	ENSKMAG00000009462	parn	83	74.394	Kryptolebias_marmoratus
ENSLAFG00000015036	PARN	92	73.254	ENSLBEG00000009167	parn	90	73.254	Labrus_bergylta
ENSLAFG00000015036	PARN	80	78.175	ENSLACG00000004207	PARN	100	76.415	Latimeria_chalumnae
ENSLAFG00000015036	PARN	99	71.495	ENSLOCG00000000715	parn	86	75.462	Lepisosteus_oculatus
ENSLAFG00000015036	PARN	100	88.438	ENSMFAG00000044852	PARN	100	98.305	Macaca_fascicularis
ENSLAFG00000015036	PARN	100	93.114	ENSMMUG00000018849	PARN	100	98.305	Macaca_mulatta
ENSLAFG00000015036	PARN	100	93.271	ENSMNEG00000045108	PARN	100	98.305	Macaca_nemestrina
ENSLAFG00000015036	PARN	100	93.114	ENSMLEG00000031743	PARN	100	98.305	Mandrillus_leucophaeus
ENSLAFG00000015036	PARN	84	77.985	ENSMAMG00000006939	parn	78	77.985	Mastacembelus_armatus
ENSLAFG00000015036	PARN	92	74.530	ENSMZEG00005013590	parn	90	77.052	Maylandia_zebra
ENSLAFG00000015036	PARN	95	81.908	ENSMGAG00000001004	PARN	95	81.908	Meleagris_gallopavo
ENSLAFG00000015036	PARN	100	79.844	ENSMAUG00000008025	Parn	100	79.844	Mesocricetus_auratus
ENSLAFG00000015036	PARN	53	34.932	ENSMAUG00000012298	Pnldc1	68	34.932	Mesocricetus_auratus
ENSLAFG00000015036	PARN	100	92.947	ENSMICG00000016053	PARN	100	100.000	Microcebus_murinus
ENSLAFG00000015036	PARN	78	90.283	ENSMOCG00000022211	Parn	100	90.283	Microtus_ochrogaster
ENSLAFG00000015036	PARN	84	76.262	ENSMMOG00000011333	parn	87	76.262	Mola_mola
ENSLAFG00000015036	PARN	78	93.145	ENSMODG00000004915	PARN	99	93.145	Monodelphis_domestica
ENSLAFG00000015036	PARN	84	78.771	ENSMALG00000019426	parn	91	78.771	Monopterus_albus
ENSLAFG00000015036	PARN	100	86.054	MGP_CAROLIEiJ_G0020466	Parn	100	86.054	Mus_caroli
ENSLAFG00000015036	PARN	100	85.895	ENSMUSG00000022685	Parn	100	93.902	Mus_musculus
ENSLAFG00000015036	PARN	100	86.054	MGP_PahariEiJ_G0016172	Parn	100	86.054	Mus_pahari
ENSLAFG00000015036	PARN	100	85.895	MGP_SPRETEiJ_G0021361	Parn	100	85.895	Mus_spretus
ENSLAFG00000015036	PARN	100	92.790	ENSMPUG00000014464	PARN	100	92.790	Mustela_putorius_furo
ENSLAFG00000015036	PARN	78	94.130	ENSMLUG00000005414	PARN	100	94.130	Myotis_lucifugus
ENSLAFG00000015036	PARN	84	76.536	ENSNBRG00000006805	parn	90	76.536	Neolamprologus_brichardi
ENSLAFG00000015036	PARN	100	92.801	ENSNLEG00000010241	PARN	100	98.305	Nomascus_leucogenys
ENSLAFG00000015036	PARN	99	61.490	ENSMEUG00000008178	-	100	61.490	Notamacropus_eugenii
ENSLAFG00000015036	PARN	99	85.895	ENSOPRG00000012187	PARN	100	85.895	Ochotona_princeps
ENSLAFG00000015036	PARN	100	82.650	ENSODEG00000001617	PARN	100	82.650	Octodon_degus
ENSLAFG00000015036	PARN	100	69.692	ENSONIG00000000151	parn	100	69.692	Oreochromis_niloticus
ENSLAFG00000015036	PARN	59	82.850	ENSOANG00000020155	-	97	83.377	Ornithorhynchus_anatinus
ENSLAFG00000015036	PARN	99	90.551	ENSOCUG00000000322	PARN	100	90.551	Oryctolagus_cuniculus
ENSLAFG00000015036	PARN	95	70.978	ENSORLG00020010313	parn	88	70.978	Oryzias_latipes_hni
ENSLAFG00000015036	PARN	95	70.978	ENSORLG00015000300	parn	88	70.978	Oryzias_latipes_hsok
ENSLAFG00000015036	PARN	92	72.899	ENSOMEG00000019555	parn	97	67.421	Oryzias_melastigma
ENSLAFG00000015036	PARN	78	92.323	ENSOGAG00000014626	PARN	100	92.323	Otolemur_garnettii
ENSLAFG00000015036	PARN	78	96.964	ENSOARG00000007574	PARN	100	96.964	Ovis_aries
ENSLAFG00000015036	PARN	100	92.801	ENSPPAG00000031438	PARN	100	98.305	Pan_paniscus
ENSLAFG00000015036	PARN	100	93.574	ENSPPRG00000018583	PARN	100	98.305	Panthera_pardus
ENSLAFG00000015036	PARN	100	93.260	ENSPTIG00000012135	PARN	100	98.305	Panthera_tigris_altaica
ENSLAFG00000015036	PARN	100	92.801	ENSPTRG00000007792	PARN	100	98.305	Pan_troglodytes
ENSLAFG00000015036	PARN	100	90.141	ENSPANG00000020099	PARN	100	98.305	Papio_anubis
ENSLAFG00000015036	PARN	91	74.216	ENSPKIG00000022807	parn	91	69.811	Paramormyrops_kingsleyae
ENSLAFG00000015036	PARN	97	84.084	ENSPSIG00000014804	PARN	100	83.189	Pelodiscus_sinensis
ENSLAFG00000015036	PARN	81	77.237	ENSPMGG00000014431	parn	77	73.646	Periophthalmus_magnuspinnatus
ENSLAFG00000015036	PARN	100	83.994	ENSPEMG00000018439	Parn	100	83.994	Peromyscus_maniculatus_bairdii
ENSLAFG00000015036	PARN	81	67.961	ENSPMAG00000003956	parn	98	68.217	Petromyzon_marinus
ENSLAFG00000015036	PARN	67	85.343	ENSPCIG00000001259	PARN	91	93.220	Phascolarctos_cinereus
ENSLAFG00000015036	PARN	90	73.997	ENSPFOG00000012823	parn	84	73.242	Poecilia_formosa
ENSLAFG00000015036	PARN	90	74.171	ENSPLAG00000006395	parn	84	73.413	Poecilia_latipinna
ENSLAFG00000015036	PARN	90	73.822	ENSPMEG00000007711	parn	84	73.242	Poecilia_mexicana
ENSLAFG00000015036	PARN	90	73.822	ENSPREG00000000147	parn	84	73.242	Poecilia_reticulata
ENSLAFG00000015036	PARN	100	92.512	ENSPPYG00000007123	PARN	100	92.512	Pongo_abelii
ENSLAFG00000015036	PARN	95	84.628	ENSPCAG00000001741	PARN	100	84.628	Procavia_capensis
ENSLAFG00000015036	PARN	100	90.282	ENSPCOG00000019292	PARN	100	100.000	Propithecus_coquereli
ENSLAFG00000015036	PARN	99	89.223	ENSPVAG00000002547	PARN	100	89.223	Pteropus_vampyrus
ENSLAFG00000015036	PARN	99	70.186	ENSPNYG00000006835	parn	90	74.488	Pundamilia_nyererei
ENSLAFG00000015036	PARN	83	74.138	ENSPNAG00000018905	parn	84	74.138	Pygocentrus_nattereri
ENSLAFG00000015036	PARN	100	83.359	ENSRNOG00000002912	Parn	98	87.879	Rattus_norvegicus
ENSLAFG00000015036	PARN	52	90.991	ENSRBIG00000018726	PARN	100	90.991	Rhinopithecus_bieti
ENSLAFG00000015036	PARN	52	90.991	ENSRROG00000011162	-	100	90.991	Rhinopithecus_roxellana
ENSLAFG00000015036	PARN	100	91.393	ENSSBOG00000034726	PARN	100	98.305	Saimiri_boliviensis_boliviensis
ENSLAFG00000015036	PARN	66	92.105	ENSSHAG00000008493	PARN	94	92.105	Sarcophilus_harrisii
ENSLAFG00000015036	PARN	96	73.388	ENSSFOG00015014165	parn	92	74.824	Scleropages_formosus
ENSLAFG00000015036	PARN	84	76.119	ENSSMAG00000000685	parn	100	62.830	Scophthalmus_maximus
ENSLAFG00000015036	PARN	90	73.830	ENSSDUG00000014555	parn	83	73.830	Seriola_dumerili
ENSLAFG00000015036	PARN	81	95.161	ENSSARG00000014339	PARN	88	95.161	Sorex_araneus
ENSLAFG00000015036	PARN	100	84.639	ENSSPUG00000007719	PARN	100	84.639	Sphenodon_punctatus
ENSLAFG00000015036	PARN	91	74.786	ENSSPAG00000007095	parn	92	70.973	Stegastes_partitus
ENSLAFG00000015036	PARN	100	91.850	ENSSSCG00000007878	PARN	89	91.850	Sus_scrofa
ENSLAFG00000015036	PARN	99	82.464	ENSTGUG00000004971	PARN	99	82.464	Taeniopygia_guttata
ENSLAFG00000015036	PARN	56	30.919	ENSTGUG00000011418	PNLDC1	68	30.919	Taeniopygia_guttata
ENSLAFG00000015036	PARN	100	69.531	ENSTNIG00000008252	parn	100	69.688	Tetraodon_nigroviridis
ENSLAFG00000015036	PARN	91	78.066	ENSTBEG00000010407	PARN	100	78.066	Tupaia_belangeri
ENSLAFG00000015036	PARN	99	88.273	ENSTTRG00000002843	PARN	100	88.273	Tursiops_truncatus
ENSLAFG00000015036	PARN	69	83.257	ENSUAMG00000008283	PARN	90	83.257	Ursus_americanus
ENSLAFG00000015036	PARN	100	92.633	ENSUMAG00000004527	PARN	100	92.633	Ursus_maritimus
ENSLAFG00000015036	PARN	96	89.414	ENSVPAG00000008968	PARN	100	89.414	Vicugna_pacos
ENSLAFG00000015036	PARN	100	92.633	ENSVVUG00000019509	PARN	100	92.633	Vulpes_vulpes
ENSLAFG00000015036	PARN	100	74.375	ENSXETG00000010994	parn	100	83.080	Xenopus_tropicalis
ENSLAFG00000015036	PARN	90	69.861	ENSXCOG00000015990	parn	96	69.521	Xiphophorus_couchianus
ENSLAFG00000015036	PARN	92	73.413	ENSXMAG00000014783	parn	84	73.413	Xiphophorus_maculatus