EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000015251 (Gene tree)
Gene ID: -
Gene Symbol: SALL1
Alias: Hsal1|TBS|ZNF794
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 5014 bases
Position: chrscaffold_43:7083587-7088600
Accession: 10524
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000012770	zf-C2H2	PF00096.26	4.9e-34	1	6
ENSLAFP00000012770	zf-C2H2	PF00096.26	4.9e-34	2	6
ENSLAFP00000012770	zf-C2H2	PF00096.26	4.9e-34	3	6
ENSLAFP00000012770	zf-C2H2	PF00096.26	4.9e-34	4	6
ENSLAFP00000012770	zf-C2H2	PF00096.26	4.9e-34	5	6
ENSLAFP00000012770	zf-C2H2	PF00096.26	4.9e-34	6	6
ENSLAFP00000018245	zf-C2H2	PF00096.26	7.4e-26	1	5
ENSLAFP00000018245	zf-C2H2	PF00096.26	7.4e-26	2	5
ENSLAFP00000018245	zf-C2H2	PF00096.26	7.4e-26	3	5
ENSLAFP00000018245	zf-C2H2	PF00096.26	7.4e-26	4	5
ENSLAFP00000018245	zf-C2H2	PF00096.26	7.4e-26	5	5
ENSLAFP00000012770	zf-met	PF12874.7	5e-25	1	5
ENSLAFP00000012770	zf-met	PF12874.7	5e-25	2	5
ENSLAFP00000012770	zf-met	PF12874.7	5e-25	3	5
ENSLAFP00000012770	zf-met	PF12874.7	5e-25	4	5
ENSLAFP00000012770	zf-met	PF12874.7	5e-25	5	5
ENSLAFP00000018245	zf-met	PF12874.7	4.3e-22	1	5
ENSLAFP00000018245	zf-met	PF12874.7	4.3e-22	2	5
ENSLAFP00000018245	zf-met	PF12874.7	4.3e-22	3	5
ENSLAFP00000018245	zf-met	PF12874.7	4.3e-22	4	5
ENSLAFP00000018245	zf-met	PF12874.7	4.3e-22	5	5
ENSLAFP00000012770	zf-C2H2_jaz	PF12171.8	8.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000015247	SALL1-202	3858	-	ENSLAFP00000012770	1286 (aa)	-	G3TES2
ENSLAFT00000029691	SALL1-201	3870	-	ENSLAFP00000018245	1289 (aa)	-	G3TRN7

Gene Model

Click here to download ENSLAFG00000015251's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000015251's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000015251	SALL1	63	45.614	ENSLAFG00000031653	-	99	50.000
ENSLAFG00000015251	SALL1	99	52.880	ENSLAFG00000013521	SALL3	99	52.954
ENSLAFG00000015251	SALL1	96	62.745	ENSLAFG00000004309	SALL4	94	62.745
ENSLAFG00000015251	SALL1	55	59.615	ENSLAFG00000032150	SALL2	59	59.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000015251	SALL1	100	92.456	ENSG00000103449	SALL1	100	93.588	Homo_sapiens
ENSLAFG00000015251	SALL1	99	68.879	ENSAPOG00000022764	sall1a	98	68.521	Acanthochromis_polyacanthus
ENSLAFG00000015251	SALL1	100	91.156	ENSAMEG00000006817	SALL1	98	91.621	Ailuropoda_melanoleuca
ENSLAFG00000015251	SALL1	100	67.607	ENSACIG00000004231	sall1a	98	67.454	Amphilophus_citrinellus
ENSLAFG00000015251	SALL1	99	68.879	ENSAOCG00000002800	sall1a	98	68.521	Amphiprion_ocellaris
ENSLAFG00000015251	SALL1	99	68.879	ENSAPEG00000010179	sall1a	98	68.521	Amphiprion_percula
ENSLAFG00000015251	SALL1	100	67.963	ENSATEG00000003006	sall1a	100	68.039	Anabas_testudineus
ENSLAFG00000015251	SALL1	100	86.879	ENSAPLG00000003356	SALL1	98	86.791	Anas_platyrhynchos
ENSLAFG00000015251	SALL1	99	82.093	ENSACAG00000014399	SALL1	96	81.783	Anolis_carolinensis
ENSLAFG00000015251	SALL1	100	92.367	ENSANAG00000027238	SALL1	98	93.061	Aotus_nancymaae
ENSLAFG00000015251	SALL1	100	68.015	ENSACLG00000017148	sall1a	99	67.851	Astatotilapia_calliptera
ENSLAFG00000015251	SALL1	98	52.238	ENSAMXG00000017702	sall1b	97	51.963	Astyanax_mexicanus
ENSLAFG00000015251	SALL1	99	69.114	ENSAMXG00000018599	sall1a	98	68.921	Astyanax_mexicanus
ENSLAFG00000015251	SALL1	100	90.473	ENSBTAG00000008544	SALL1	98	91.557	Bos_taurus
ENSLAFG00000015251	SALL1	100	92.290	ENSCJAG00000001740	SALL1	98	93.061	Callithrix_jacchus
ENSLAFG00000015251	SALL1	100	90.300	ENSCAFG00000009755	SALL1	98	91.378	Canis_familiaris
ENSLAFG00000015251	SALL1	100	90.300	ENSCAFG00020002842	SALL1	98	91.378	Canis_lupus_dingo
ENSLAFG00000015251	SALL1	100	90.325	ENSCHIG00000026074	SALL1	99	91.099	Capra_hircus
ENSLAFG00000015251	SALL1	100	93.333	ENSTSYG00000029464	SALL1	98	92.868	Carlito_syrichta
ENSLAFG00000015251	SALL1	99	93.162	ENSCPOG00000006564	SALL1	100	93.162	Cavia_porcellus
ENSLAFG00000015251	SALL1	100	89.961	ENSCCAG00000001639	SALL1	98	90.811	Cebus_capucinus
ENSLAFG00000015251	SALL1	100	92.968	ENSCATG00000004982	SALL1	98	93.740	Cercocebus_atys
ENSLAFG00000015251	SALL1	100	93.711	ENSCLAG00000006380	SALL1	98	93.711	Chinchilla_lanigera
ENSLAFG00000015251	SALL1	100	91.590	ENSCSAG00000005319	SALL1	98	92.361	Chlorocebus_sabaeus
ENSLAFG00000015251	SALL1	71	93.281	ENSCHOG00000000800	-	69	93.281	Choloepus_hoffmanni
ENSLAFG00000015251	SALL1	100	86.889	ENSCPBG00000015924	SALL1	99	86.760	Chrysemys_picta_bellii
ENSLAFG00000015251	SALL1	100	92.962	ENSCANG00000036664	SALL1	100	93.857	Colobus_angolensis_palliatus
ENSLAFG00000015251	SALL1	100	89.490	ENSCGRG00001023314	-	98	89.335	Cricetulus_griseus_chok1gshd
ENSLAFG00000015251	SALL1	99	89.482	ENSCGRG00000009496	Sall1	100	89.327	Cricetulus_griseus_crigri
ENSLAFG00000015251	SALL1	100	66.667	ENSCSEG00000009349	sall1a	98	66.768	Cynoglossus_semilaevis
ENSLAFG00000015251	SALL1	90	67.324	ENSCVAG00000020513	sall1a	97	66.924	Cyprinodon_variegatus
ENSLAFG00000015251	SALL1	100	68.485	ENSDARG00000074319	sall1a	99	68.244	Danio_rerio
ENSLAFG00000015251	SALL1	98	48.102	ENSDARG00000075891	sall1b	97	47.984	Danio_rerio
ENSLAFG00000015251	SALL1	100	91.860	ENSDNOG00000016413	SALL1	98	92.558	Dasypus_novemcinctus
ENSLAFG00000015251	SALL1	99	92.852	ENSETEG00000015150	SALL1	100	92.852	Echinops_telfairi
ENSLAFG00000015251	SALL1	67	43.367	ENSEBUG00000008798	SALL1	68	43.819	Eptatretus_burgeri
ENSLAFG00000015251	SALL1	88	65.385	ENSEBUG00000011732	SALL1	93	65.385	Eptatretus_burgeri
ENSLAFG00000015251	SALL1	100	93.711	ENSEASG00005014602	SALL1	98	93.711	Equus_asinus_asinus
ENSLAFG00000015251	SALL1	90	91.753	ENSECAG00000011334	SALL1	98	91.753	Equus_caballus
ENSLAFG00000015251	SALL1	99	90.085	ENSEEUG00000002014	SALL1	100	90.163	Erinaceus_europaeus
ENSLAFG00000015251	SALL1	99	51.534	ENSELUG00000017774	-	98	51.831	Esox_lucius
ENSLAFG00000015251	SALL1	99	66.496	ENSELUG00000006159	sall1a	99	66.253	Esox_lucius
ENSLAFG00000015251	SALL1	100	90.093	ENSFCAG00000024654	SALL1	100	90.574	Felis_catus
ENSLAFG00000015251	SALL1	100	86.025	ENSFALG00000000074	SALL1	98	85.936	Ficedula_albicollis
ENSLAFG00000015251	SALL1	100	67.559	ENSFHEG00000012579	sall1a	98	67.330	Fundulus_heteroclitus
ENSLAFG00000015251	SALL1	75	63.462	ENSFHEG00000008424	-	94	63.462	Fundulus_heteroclitus
ENSLAFG00000015251	SALL1	99	42.519	ENSGMOG00000013383	-	99	41.447	Gadus_morhua
ENSLAFG00000015251	SALL1	99	65.585	ENSGMOG00000006103	sall1a	98	65.682	Gadus_morhua
ENSLAFG00000015251	SALL1	99	86.335	ENSGALG00000039238	SALL1	98	86.102	Gallus_gallus
ENSLAFG00000015251	SALL1	99	67.933	ENSGAFG00000009964	sall1a	98	67.685	Gambusia_affinis
ENSLAFG00000015251	SALL1	100	67.227	ENSGACG00000016702	sall1a	98	66.998	Gasterosteus_aculeatus
ENSLAFG00000015251	SALL1	100	86.579	ENSGAGG00000013979	SALL1	99	86.431	Gopherus_agassizii
ENSLAFG00000015251	SALL1	100	92.610	ENSGGOG00000000663	SALL1	98	93.303	Gorilla_gorilla
ENSLAFG00000015251	SALL1	100	67.939	ENSHBUG00000022005	sall1a	99	67.771	Haplochromis_burtoni
ENSLAFG00000015251	SALL1	100	92.469	ENSHGLG00000004288	-	98	93.012	Heterocephalus_glaber_female
ENSLAFG00000015251	SALL1	100	92.469	ENSHGLG00100017496	SALL1	98	93.012	Heterocephalus_glaber_male
ENSLAFG00000015251	SALL1	99	66.742	ENSHCOG00000000974	sall1a	98	66.490	Hippocampus_comes
ENSLAFG00000015251	SALL1	99	69.681	ENSIPUG00000016265	SALL1	98	69.307	Ictalurus_punctatus
ENSLAFG00000015251	SALL1	99	49.461	ENSIPUG00000022928	sall1b	97	48.630	Ictalurus_punctatus
ENSLAFG00000015251	SALL1	100	92.016	ENSSTOG00000020885	SALL1	98	92.016	Ictidomys_tridecemlineatus
ENSLAFG00000015251	SALL1	100	67.609	ENSKMAG00000016681	sall1a	98	67.429	Kryptolebias_marmoratus
ENSLAFG00000015251	SALL1	99	66.846	ENSLBEG00000012207	sall1a	95	66.615	Labrus_bergylta
ENSLAFG00000015251	SALL1	99	39.332	ENSLACG00000014018	-	93	40.098	Latimeria_chalumnae
ENSLAFG00000015251	SALL1	100	78.200	ENSLACG00000003556	SALL1	98	78.106	Latimeria_chalumnae
ENSLAFG00000015251	SALL1	99	73.983	ENSLOCG00000007283	sall1b	98	73.628	Lepisosteus_oculatus
ENSLAFG00000015251	SALL1	100	92.758	ENSMFAG00000003298	SALL1	98	93.220	Macaca_fascicularis
ENSLAFG00000015251	SALL1	94	92.822	ENSMMUG00000017200	SALL1	100	93.312	Macaca_mulatta
ENSLAFG00000015251	SALL1	94	92.665	ENSMNEG00000034770	SALL1	100	93.073	Macaca_nemestrina
ENSLAFG00000015251	SALL1	100	93.117	ENSMLEG00000036406	SALL1	100	93.939	Mandrillus_leucophaeus
ENSLAFG00000015251	SALL1	100	68.313	ENSMAMG00000004164	sall1a	100	68.328	Mastacembelus_armatus
ENSLAFG00000015251	SALL1	100	68.015	ENSMZEG00005006479	sall1a	99	67.851	Maylandia_zebra
ENSLAFG00000015251	SALL1	99	86.491	ENSMGAG00000004704	SALL1	99	86.258	Meleagris_gallopavo
ENSLAFG00000015251	SALL1	100	89.070	ENSMAUG00000019093	Sall1	98	88.906	Mesocricetus_auratus
ENSLAFG00000015251	SALL1	100	90.930	ENSMICG00000036486	SALL1	98	90.930	Microcebus_murinus
ENSLAFG00000015251	SALL1	100	67.887	ENSMMOG00000016400	sall1a	98	67.658	Mola_mola
ENSLAFG00000015251	SALL1	100	90.140	ENSMODG00000013114	SALL1	98	90.062	Monodelphis_domestica
ENSLAFG00000015251	SALL1	100	68.521	ENSMALG00000013400	sall1a	98	68.369	Monopterus_albus
ENSLAFG00000015251	SALL1	100	87.982	MGP_CAROLIEiJ_G0031362	Sall1	98	88.521	Mus_caroli
ENSLAFG00000015251	SALL1	100	87.914	ENSMUSG00000031665	Sall1	98	88.376	Mus_musculus
ENSLAFG00000015251	SALL1	100	87.692	MGP_PahariEiJ_G0022961	Sall1	98	88.308	Mus_pahari
ENSLAFG00000015251	SALL1	100	87.914	MGP_SPRETEiJ_G0032480	Sall1	98	88.376	Mus_spretus
ENSLAFG00000015251	SALL1	100	90.473	ENSMPUG00000003265	SALL1	96	90.395	Mustela_putorius_furo
ENSLAFG00000015251	SALL1	100	83.988	ENSMLUG00000015541	SALL1	100	84.988	Myotis_lucifugus
ENSLAFG00000015251	SALL1	100	67.939	ENSNBRG00000009307	sall1a	99	67.771	Neolamprologus_brichardi
ENSLAFG00000015251	SALL1	95	96.111	ENSNLEG00000001008	SALL1	99	96.111	Nomascus_leucogenys
ENSLAFG00000015251	SALL1	100	89.380	ENSMEUG00000012206	SALL1	98	89.147	Notamacropus_eugenii
ENSLAFG00000015251	SALL1	88	93.908	ENSOPRG00000005645	SALL1	72	93.908	Ochotona_princeps
ENSLAFG00000015251	SALL1	100	93.245	ENSODEG00000003685	SALL1	98	93.245	Octodon_degus
ENSLAFG00000015251	SALL1	100	68.244	ENSONIG00000002831	sall1a	98	68.092	Oreochromis_niloticus
ENSLAFG00000015251	SALL1	87	84.485	ENSOANG00000013399	SALL1	91	86.038	Ornithorhynchus_anatinus
ENSLAFG00000015251	SALL1	100	67.727	ENSORLG00000013827	sall1a	97	70.017	Oryzias_latipes
ENSLAFG00000015251	SALL1	100	67.652	ENSORLG00020020570	sall1a	98	67.378	Oryzias_latipes_hni
ENSLAFG00000015251	SALL1	100	67.727	ENSORLG00015018830	sall1a	97	70.017	Oryzias_latipes_hsok
ENSLAFG00000015251	SALL1	100	67.273	ENSOMEG00000016043	sall1a	99	67.797	Oryzias_melastigma
ENSLAFG00000015251	SALL1	100	92.343	ENSOGAG00000027316	SALL1	98	92.575	Otolemur_garnettii
ENSLAFG00000015251	SALL1	100	84.758	ENSOARG00000017583	SALL1	98	85.593	Ovis_aries
ENSLAFG00000015251	SALL1	99	70.629	ENSPPAG00000035136	-	99	71.639	Pan_paniscus
ENSLAFG00000015251	SALL1	99	92.681	ENSPPAG00000035657	SALL1	100	93.374	Pan_paniscus
ENSLAFG00000015251	SALL1	100	89.938	ENSPPRG00000023283	SALL1	100	90.410	Panthera_pardus
ENSLAFG00000015251	SALL1	84	94.667	ENSPTIG00000013539	-	95	94.667	Panthera_tigris_altaica
ENSLAFG00000015251	SALL1	100	92.747	ENSPTRG00000008108	SALL1	98	93.441	Pan_troglodytes
ENSLAFG00000015251	SALL1	98	71.044	ENSPTRG00000045256	-	98	72.073	Pan_troglodytes
ENSLAFG00000015251	SALL1	100	93.194	ENSPANG00000024176	SALL1	98	93.890	Papio_anubis
ENSLAFG00000015251	SALL1	100	65.686	ENSPKIG00000005383	-	98	65.736	Paramormyrops_kingsleyae
ENSLAFG00000015251	SALL1	99	66.873	ENSPKIG00000022251	sall1a	97	66.770	Paramormyrops_kingsleyae
ENSLAFG00000015251	SALL1	100	86.102	ENSPSIG00000008582	SALL1	98	85.936	Pelodiscus_sinensis
ENSLAFG00000015251	SALL1	99	66.383	ENSPMGG00000021788	sall1a	96	66.435	Periophthalmus_magnuspinnatus
ENSLAFG00000015251	SALL1	100	89.535	ENSPCIG00000017840	SALL1	98	89.302	Phascolarctos_cinereus
ENSLAFG00000015251	SALL1	99	67.705	ENSPFOG00000015799	sall1a	96	67.508	Poecilia_formosa
ENSLAFG00000015251	SALL1	100	67.806	ENSPLAG00000022539	sall1a	98	67.609	Poecilia_latipinna
ENSLAFG00000015251	SALL1	100	67.806	ENSPMEG00000020894	sall1a	98	67.609	Poecilia_mexicana
ENSLAFG00000015251	SALL1	100	67.730	ENSPREG00000006802	sall1a	99	67.532	Poecilia_reticulata
ENSLAFG00000015251	SALL1	90	92.708	ENSPPYG00000007345	SALL1	94	93.490	Pongo_abelii
ENSLAFG00000015251	SALL1	84	98.246	ENSPCAG00000008162	SALL1	91	98.039	Procavia_capensis
ENSLAFG00000015251	SALL1	100	92.016	ENSPCOG00000028192	SALL1	98	92.016	Propithecus_coquereli
ENSLAFG00000015251	SALL1	82	90.537	ENSPVAG00000015374	SALL1	100	91.238	Pteropus_vampyrus
ENSLAFG00000015251	SALL1	100	68.015	ENSPNYG00000010865	sall1a	99	67.851	Pundamilia_nyererei
ENSLAFG00000015251	SALL1	98	54.096	ENSPNAG00000007442	sall1b	97	53.632	Pygocentrus_nattereri
ENSLAFG00000015251	SALL1	99	67.069	ENSPNAG00000023644	sall1a	98	67.096	Pygocentrus_nattereri
ENSLAFG00000015251	SALL1	98	63.462	ENSPNAG00000028248	-	86	65.306	Pygocentrus_nattereri
ENSLAFG00000015251	SALL1	100	88.399	ENSRNOG00000013907	Sall1	98	88.631	Rattus_norvegicus
ENSLAFG00000015251	SALL1	94	92.729	ENSRBIG00000015707	SALL1	100	93.546	Rhinopithecus_bieti
ENSLAFG00000015251	SALL1	99	92.664	ENSRROG00000035777	SALL1	100	93.469	Rhinopithecus_roxellana
ENSLAFG00000015251	SALL1	100	92.373	ENSSBOG00000032186	SALL1	98	93.066	Saimiri_boliviensis_boliviensis
ENSLAFG00000015251	SALL1	100	88.733	ENSSHAG00000009477	SALL1	98	88.500	Sarcophilus_harrisii
ENSLAFG00000015251	SALL1	100	66.692	ENSSFOG00015001590	sall1a	99	66.692	Scleropages_formosus
ENSLAFG00000015251	SALL1	99	67.460	ENSSFOG00015020020	sall1a	98	67.281	Scleropages_formosus
ENSLAFG00000015251	SALL1	100	67.988	ENSSMAG00000009160	sall1a	98	67.939	Scophthalmus_maximus
ENSLAFG00000015251	SALL1	78	59.184	ENSSDUG00000000748	sall1b	84	65.116	Seriola_dumerili
ENSLAFG00000015251	SALL1	100	68.674	ENSSDUG00000006507	sall1a	100	68.629	Seriola_dumerili
ENSLAFG00000015251	SALL1	100	68.750	ENSSLDG00000017721	sall1a	98	68.674	Seriola_lalandi_dorsalis
ENSLAFG00000015251	SALL1	99	89.775	ENSSARG00000000661	SALL1	100	90.318	Sorex_araneus
ENSLAFG00000015251	SALL1	100	86.113	ENSSPUG00000000156	SALL1	98	85.947	Sphenodon_punctatus
ENSLAFG00000015251	SALL1	99	68.750	ENSSPAG00000021615	sall1a	98	68.449	Stegastes_partitus
ENSLAFG00000015251	SALL1	100	90.546	ENSSSCG00000002836	SALL1	98	91.007	Sus_scrofa
ENSLAFG00000015251	SALL1	99	86.491	ENSTGUG00000007514	SALL1	98	86.258	Taeniopygia_guttata
ENSLAFG00000015251	SALL1	91	66.276	ENSTRUG00000008950	sall1a	98	66.388	Takifugu_rubripes
ENSLAFG00000015251	SALL1	92	65.362	ENSTNIG00000004257	sall1a	98	65.474	Tetraodon_nigroviridis
ENSLAFG00000015251	SALL1	78	94.521	ENSTBEG00000002119	-	53	94.521	Tupaia_belangeri
ENSLAFG00000015251	SALL1	90	90.513	ENSUAMG00000023379	-	90	91.384	Ursus_americanus
ENSLAFG00000015251	SALL1	90	89.455	ENSVVUG00000019383	-	97	90.579	Vulpes_vulpes
ENSLAFG00000015251	SALL1	79	61.538	ENSXETG00000017176	sall2	69	61.538	Xenopus_tropicalis
ENSLAFG00000015251	SALL1	99	78.123	ENSXETG00000018417	sall1	96	77.580	Xenopus_tropicalis
ENSLAFG00000015251	SALL1	100	67.654	ENSXMAG00000016273	sall1a	99	67.259	Xiphophorus_maculatus