EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000015315 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 35782 bases
Position: chrscaffold_8:41220940-41256721
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000012828	ResIII	PF04851.15	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000015314	-	2427	-	ENSLAFP00000012828	808 (aa)	-	G3TEX1

Gene Model

Click here to download ENSLAFG00000015315's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000015315's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000015315	-	62	30.233	ENSLAFG00000018136	CHD1L	53	30.097
ENSLAFG00000015315	-	86	42.228	ENSLAFG00000007583	RAD54L	94	41.477
ENSLAFG00000015315	-	59	33.198	ENSLAFG00000016885	-	51	33.469
ENSLAFG00000015315	-	66	33.692	ENSLAFG00000000896	SMARCA1	50	33.692
ENSLAFG00000015315	-	66	30.860	ENSLAFG00000013092	ERCC6L2	83	30.860

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000015315	-	100	85.891	ENSG00000197275	RAD54B	89	85.891	Homo_sapiens
ENSLAFG00000015315	-	90	88.981	ENSG00000265817	FSBP	100	88.981	Homo_sapiens
ENSLAFG00000015315	-	100	85.661	ENSAMEG00000005834	-	89	85.661	Ailuropoda_melanoleuca
ENSLAFG00000015315	-	97	57.915	ENSACIG00000013005	rad54b	89	57.915	Amphilophus_citrinellus
ENSLAFG00000015315	-	97	58.417	ENSAOCG00000008523	rad54b	85	58.417	Amphiprion_ocellaris
ENSLAFG00000015315	-	97	57.305	ENSAPEG00000001673	rad54b	89	57.305	Amphiprion_percula
ENSLAFG00000015315	-	97	57.107	ENSATEG00000001527	rad54b	90	57.107	Anabas_testudineus
ENSLAFG00000015315	-	98	72.704	ENSAPLG00000014366	-	87	72.704	Anas_platyrhynchos
ENSLAFG00000015315	-	98	69.571	ENSACAG00000003671	-	99	69.571	Anolis_carolinensis
ENSLAFG00000015315	-	80	86.883	ENSANAG00000019528	-	99	86.883	Aotus_nancymaae
ENSLAFG00000015315	-	97	57.377	ENSACLG00000007826	rad54b	92	57.377	Astatotilapia_calliptera
ENSLAFG00000015315	-	96	55.711	ENSAMXG00000039985	rad54b	94	55.472	Astyanax_mexicanus
ENSLAFG00000015315	-	100	85.025	ENSBTAG00000000632	RAD54B	89	85.025	Bos_taurus
ENSLAFG00000015315	-	89	34.218	WBGene00013792	Y116A8C.13	71	39.531	Caenorhabditis_elegans
ENSLAFG00000015315	-	100	84.035	ENSCJAG00000000080	-	100	87.052	Callithrix_jacchus
ENSLAFG00000015315	-	100	84.054	ENSCAFG00000009179	RAD54B	89	84.054	Canis_familiaris
ENSLAFG00000015315	-	100	83.931	ENSCAFG00020012084	-	89	83.931	Canis_lupus_dingo
ENSLAFG00000015315	-	100	85.272	ENSCHIG00000008230	-	89	85.272	Capra_hircus
ENSLAFG00000015315	-	100	85.520	ENSTSYG00000013234	-	89	85.520	Carlito_syrichta
ENSLAFG00000015315	-	100	84.035	ENSCPOG00000011643	-	90	84.035	Cavia_porcellus
ENSLAFG00000015315	-	100	83.787	ENSCCAG00000011754	-	100	87.052	Cebus_capucinus
ENSLAFG00000015315	-	100	85.272	ENSCATG00000030661	-	100	88.567	Cercocebus_atys
ENSLAFG00000015315	-	99	83.995	ENSCLAG00000010476	-	91	83.955	Chinchilla_lanigera
ENSLAFG00000015315	-	100	84.777	ENSCSAG00000012712	-	89	84.777	Chlorocebus_sabaeus
ENSLAFG00000015315	-	99	72.525	ENSCPBG00000003204	-	88	72.525	Chrysemys_picta_bellii
ENSLAFG00000015315	-	100	85.272	ENSCANG00000017939	-	100	88.567	Colobus_angolensis_palliatus
ENSLAFG00000015315	-	100	79.604	ENSCGRG00001020184	Rad54b	92	79.604	Cricetulus_griseus_chok1gshd
ENSLAFG00000015315	-	100	78.368	ENSCGRG00000016752	Rad54b	91	78.368	Cricetulus_griseus_crigri
ENSLAFG00000015315	-	97	57.089	ENSCSEG00000001601	rad54b	92	57.089	Cynoglossus_semilaevis
ENSLAFG00000015315	-	97	59.446	ENSCVAG00000009200	rad54b	89	59.446	Cyprinodon_variegatus
ENSLAFG00000015315	-	97	57.196	ENSDARG00000092134	rad54b	100	60.796	Danio_rerio
ENSLAFG00000015315	-	99	85.062	ENSDNOG00000015535	-	89	85.062	Dasypus_novemcinctus
ENSLAFG00000015315	-	99	83.313	ENSDORG00000002492	Rad54b	92	83.313	Dipodomys_ordii
ENSLAFG00000015315	-	85	86.880	ENSETEG00000010605	-	87	86.880	Echinops_telfairi
ENSLAFG00000015315	-	97	49.308	ENSEBUG00000009104	rad54b	84	49.308	Eptatretus_burgeri
ENSLAFG00000015315	-	100	84.035	ENSEASG00005004021	-	92	84.035	Equus_asinus_asinus
ENSLAFG00000015315	-	100	84.530	ENSECAG00000021949	-	95	84.530	Equus_caballus
ENSLAFG00000015315	-	81	83.851	ENSEEUG00000008056	-	72	83.851	Erinaceus_europaeus
ENSLAFG00000015315	-	96	56.997	ENSELUG00000009287	rad54b	84	56.997	Esox_lucius
ENSLAFG00000015315	-	100	85.167	ENSFCAG00000015513	-	100	88.567	Felis_catus
ENSLAFG00000015315	-	98	71.698	ENSFALG00000005467	-	87	71.698	Ficedula_albicollis
ENSLAFG00000015315	-	99	84.243	ENSFDAG00000020541	-	89	84.243	Fukomys_damarensis
ENSLAFG00000015315	-	97	56.516	ENSFHEG00000014382	rad54b	87	56.516	Fundulus_heteroclitus
ENSLAFG00000015315	-	97	54.557	ENSGMOG00000014774	rad54b	98	54.557	Gadus_morhua
ENSLAFG00000015315	-	99	70.421	ENSGALG00000043597	RAD54B	88	70.421	Gallus_gallus
ENSLAFG00000015315	-	97	58.756	ENSGAFG00000007901	rad54b	91	58.756	Gambusia_affinis
ENSLAFG00000015315	-	99	56.671	ENSGACG00000009128	rad54b	88	56.916	Gasterosteus_aculeatus
ENSLAFG00000015315	-	99	72.119	ENSGAGG00000018747	-	88	72.119	Gopherus_agassizii
ENSLAFG00000015315	-	100	85.644	ENSGGOG00000023516	-	89	85.644	Gorilla_gorilla
ENSLAFG00000015315	-	97	57.431	ENSHBUG00000016017	rad54b	84	57.431	Haplochromis_burtoni
ENSLAFG00000015315	-	100	83.047	ENSHGLG00000008263	RAD54B	88	83.047	Heterocephalus_glaber_female
ENSLAFG00000015315	-	100	82.073	ENSHGLG00100008108	-	88	82.073	Heterocephalus_glaber_male
ENSLAFG00000015315	-	97	55.767	ENSHCOG00000004764	rad54b	99	53.430	Hippocampus_comes
ENSLAFG00000015315	-	99	54.590	ENSIPUG00000018531	rad54b	86	54.590	Ictalurus_punctatus
ENSLAFG00000015315	-	99	83.250	ENSSTOG00000010791	-	88	83.250	Ictidomys_tridecemlineatus
ENSLAFG00000015315	-	100	82.178	ENSJJAG00000010314	Rad54b	89	82.178	Jaculus_jaculus
ENSLAFG00000015315	-	97	56.944	ENSKMAG00000004744	rad54b	91	56.944	Kryptolebias_marmoratus
ENSLAFG00000015315	-	91	68.733	ENSLACG00000000859	-	99	68.733	Latimeria_chalumnae
ENSLAFG00000015315	-	98	61.347	ENSLOCG00000010100	rad54b	94	61.347	Lepisosteus_oculatus
ENSLAFG00000015315	-	100	85.025	ENSMFAG00000031629	-	100	88.292	Macaca_fascicularis
ENSLAFG00000015315	-	100	85.025	ENSMMUG00000005659	-	89	85.025	Macaca_mulatta
ENSLAFG00000015315	-	100	84.777	ENSMNEG00000016408	-	89	84.777	Macaca_nemestrina
ENSLAFG00000015315	-	100	85.149	ENSMLEG00000006946	-	89	85.149	Mandrillus_leucophaeus
ENSLAFG00000015315	-	97	57.625	ENSMAMG00000012269	rad54b	89	57.625	Mastacembelus_armatus
ENSLAFG00000015315	-	97	57.431	ENSMZEG00005005281	rad54b	95	57.125	Maylandia_zebra
ENSLAFG00000015315	-	98	71.537	ENSMGAG00000012024	-	86	71.537	Meleagris_gallopavo
ENSLAFG00000015315	-	99	78.750	ENSMAUG00000013586	Rad54b	90	78.750	Mesocricetus_auratus
ENSLAFG00000015315	-	99	86.121	ENSMICG00000000754	-	93	86.121	Microcebus_murinus
ENSLAFG00000015315	-	100	78.245	ENSMOCG00000020035	Rad54b	91	78.245	Microtus_ochrogaster
ENSLAFG00000015315	-	97	57.268	ENSMMOG00000003394	rad54b	89	57.268	Mola_mola
ENSLAFG00000015315	-	99	75.093	ENSMODG00000007343	-	99	75.093	Monodelphis_domestica
ENSLAFG00000015315	-	80	60.155	ENSMALG00000001520	rad54b	99	60.155	Monopterus_albus
ENSLAFG00000015315	-	100	80.346	MGP_CAROLIEiJ_G0025810	Rad54b	91	80.346	Mus_caroli
ENSLAFG00000015315	-	100	80.446	ENSMUSG00000078773	Rad54b	91	80.446	Mus_musculus
ENSLAFG00000015315	-	100	80.693	MGP_PahariEiJ_G0023933	Rad54b	91	80.693	Mus_pahari
ENSLAFG00000015315	-	100	81.064	MGP_SPRETEiJ_G0026758	Rad54b	91	81.064	Mus_spretus
ENSLAFG00000015315	-	100	84.178	ENSMPUG00000008878	-	99	84.178	Mustela_putorius_furo
ENSLAFG00000015315	-	100	84.406	ENSMLUG00000008953	-	89	84.406	Myotis_lucifugus
ENSLAFG00000015315	-	100	82.555	ENSNGAG00000017537	Rad54b	90	82.555	Nannospalax_galili
ENSLAFG00000015315	-	97	57.503	ENSNBRG00000013394	rad54b	92	57.503	Neolamprologus_brichardi
ENSLAFG00000015315	-	100	85.767	ENSNLEG00000003062	-	99	88.981	Nomascus_leucogenys
ENSLAFG00000015315	-	80	70.902	ENSMEUG00000012426	-	71	70.902	Notamacropus_eugenii
ENSLAFG00000015315	-	100	82.550	ENSODEG00000019564	-	89	82.550	Octodon_degus
ENSLAFG00000015315	-	100	77.351	ENSODEG00000002650	-	100	77.351	Octodon_degus
ENSLAFG00000015315	-	97	57.557	ENSONIG00000006067	rad54b	86	57.557	Oreochromis_niloticus
ENSLAFG00000015315	-	93	77.036	ENSOANG00000011348	-	99	77.036	Ornithorhynchus_anatinus
ENSLAFG00000015315	-	100	84.530	ENSOCUG00000016478	-	89	84.530	Oryctolagus_cuniculus
ENSLAFG00000015315	-	97	59.296	ENSORLG00000008918	rad54b	99	62.558	Oryzias_latipes
ENSLAFG00000015315	-	80	62.558	ENSORLG00020012171	rad54b	99	62.558	Oryzias_latipes_hni
ENSLAFG00000015315	-	97	58.728	ENSORLG00015018536	rad54b	84	58.728	Oryzias_latipes_hsok
ENSLAFG00000015315	-	95	58.793	ENSOMEG00000004345	rad54b	99	58.793	Oryzias_melastigma
ENSLAFG00000015315	-	99	85.254	ENSOGAG00000007854	-	89	85.254	Otolemur_garnettii
ENSLAFG00000015315	-	100	84.710	ENSOARG00000007691	-	99	84.710	Ovis_aries
ENSLAFG00000015315	-	100	84.158	ENSPPAG00000029572	-	89	84.158	Pan_paniscus
ENSLAFG00000015315	-	100	85.167	ENSPPRG00000007571	-	100	88.567	Panthera_pardus
ENSLAFG00000015315	-	90	88.567	ENSPTIG00000012670	-	100	88.567	Panthera_tigris_altaica
ENSLAFG00000015315	-	100	85.767	ENSPTRG00000020427	-	100	88.843	Pan_troglodytes
ENSLAFG00000015315	-	100	85.149	ENSPANG00000019566	-	89	85.149	Papio_anubis
ENSLAFG00000015315	-	97	61.217	ENSPKIG00000014974	rad54b	85	61.217	Paramormyrops_kingsleyae
ENSLAFG00000015315	-	99	71.588	ENSPSIG00000002383	-	98	71.588	Pelodiscus_sinensis
ENSLAFG00000015315	-	100	79.357	ENSPEMG00000012133	Rad54b	91	79.357	Peromyscus_maniculatus_bairdii
ENSLAFG00000015315	-	98	56.946	ENSPMAG00000002916	rad54b	99	56.946	Petromyzon_marinus
ENSLAFG00000015315	-	99	76.035	ENSPCIG00000020151	-	94	75.373	Phascolarctos_cinereus
ENSLAFG00000015315	-	97	59.217	ENSPFOG00000023411	rad54b	84	59.217	Poecilia_formosa
ENSLAFG00000015315	-	97	59.470	ENSPLAG00000010430	rad54b	84	59.470	Poecilia_latipinna
ENSLAFG00000015315	-	99	58.025	ENSPMEG00000016873	rad54b	95	58.025	Poecilia_mexicana
ENSLAFG00000015315	-	97	58.720	ENSPREG00000018443	rad54b	90	58.616	Poecilia_reticulata
ENSLAFG00000015315	-	100	85.396	ENSPPYG00000018750	-	89	85.396	Pongo_abelii
ENSLAFG00000015315	-	99	85.750	ENSPCOG00000026845	-	99	88.138	Propithecus_coquereli
ENSLAFG00000015315	-	92	88.664	ENSPVAG00000000261	-	86	88.664	Pteropus_vampyrus
ENSLAFG00000015315	-	98	57.233	ENSPNYG00000018303	rad54b	96	57.233	Pundamilia_nyererei
ENSLAFG00000015315	-	97	56.446	ENSPNAG00000000295	rad54b	92	56.085	Pygocentrus_nattereri
ENSLAFG00000015315	-	100	78.245	ENSRNOG00000039949	Rad54b	91	78.245	Rattus_norvegicus
ENSLAFG00000015315	-	100	84.530	ENSRBIG00000020419	-	89	84.530	Rhinopithecus_bieti
ENSLAFG00000015315	-	100	84.530	ENSRROG00000039897	-	89	84.530	Rhinopithecus_roxellana
ENSLAFG00000015315	-	69	42.951	YBR073W	RDH54	61	42.951	Saccharomyces_cerevisiae
ENSLAFG00000015315	-	100	83.663	ENSSBOG00000028501	-	89	83.663	Saimiri_boliviensis_boliviensis
ENSLAFG00000015315	-	99	75.780	ENSSHAG00000017038	-	88	75.780	Sarcophilus_harrisii
ENSLAFG00000015315	-	73	63.946	ENSSFOG00015008483	rad54b	91	63.946	Scleropages_formosus
ENSLAFG00000015315	-	97	56.835	ENSSMAG00000018659	rad54b	91	56.599	Scophthalmus_maximus
ENSLAFG00000015315	-	94	58.656	ENSSDUG00000001122	rad54b	81	58.656	Seriola_dumerili
ENSLAFG00000015315	-	97	58.028	ENSSLDG00000013787	rad54b	91	53.797	Seriola_lalandi_dorsalis
ENSLAFG00000015315	-	98	71.734	ENSSPUG00000016497	-	90	71.734	Sphenodon_punctatus
ENSLAFG00000015315	-	97	58.040	ENSSPAG00000012800	rad54b	90	58.040	Stegastes_partitus
ENSLAFG00000015315	-	100	84.158	ENSSSCG00000006101	-	99	84.375	Sus_scrofa
ENSLAFG00000015315	-	98	71.267	ENSTGUG00000011880	-	87	71.267	Taeniopygia_guttata
ENSLAFG00000015315	-	97	57.967	ENSTRUG00000010015	rad54b	84	57.967	Takifugu_rubripes
ENSLAFG00000015315	-	100	81.064	ENSTTRG00000006312	-	89	81.064	Tursiops_truncatus
ENSLAFG00000015315	-	100	85.785	ENSUMAG00000016401	-	89	85.785	Ursus_maritimus
ENSLAFG00000015315	-	100	84.901	ENSVPAG00000003157	-	89	84.901	Vicugna_pacos
ENSLAFG00000015315	-	98	58.668	ENSXETG00000025924	rad54b	99	58.668	Xenopus_tropicalis
ENSLAFG00000015315	-	97	58.712	ENSXMAG00000013141	rad54b	90	58.712	Xiphophorus_maculatus