EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSLAFG00000015354 (Gene tree)
Gene ID
-
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Loxodonta_africana
Status
putative
Strand
Plus strand
Length
60689 bases
Position
chrscaffold_47:4997591-5058279
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLAFP00000012864tRNA_anti-codonPF01336.253e-1211
ENSLAFP00000029083tRNA_anti-codonPF01336.253.1e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLAFT00000015355RPA1-2011929-ENSLAFP00000012864643 (aa)-G3TEZ6
ENSLAFT00000030092RPA1-2021872-ENSLAFP00000029083624 (aa)-G3UMM4
Gene Model
Click here to download ENSLAFG00000015354's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000015354's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLAFG00000015354RPA19959.781ENSAPOG00000011658rpa19961.905Acanthochromis_polyacanthus
ENSLAFG00000015354RPA19263.761ENSAPOG00000019409RPA18363.825Acanthochromis_polyacanthus
ENSLAFG00000015354RPA19889.902ENSAMEG00000007706RPA19889.902Ailuropoda_melanoleuca
ENSLAFG00000015354RPA19556.784ENSACIG00000012881RPA19956.784Amphilophus_citrinellus
ENSLAFG00000015354RPA19656.784ENSACIG00000007277rpa19956.784Amphilophus_citrinellus
ENSLAFG00000015354RPA19961.290ENSAOCG00000023376rpa19962.245Amphiprion_ocellaris
ENSLAFG00000015354RPA19952.836ENSAOCG00000009003RPA19755.803Amphiprion_ocellaris
ENSLAFG00000015354RPA19952.276ENSAPEG00000019132RPA19754.814Amphiprion_percula
ENSLAFG00000015354RPA19961.129ENSAPEG00000008634rpa19962.075Amphiprion_percula
ENSLAFG00000015354RPA19562.944ENSATEG00000022024rpa19962.944Anabas_testudineus
ENSLAFG00000015354RPA19952.065ENSATEG00000006443RPA19754.474Anabas_testudineus
ENSLAFG00000015354RPA19864.723ENSAPLG00000012442RPA110064.723Anas_platyrhynchos
ENSLAFG00000015354RPA19962.420ENSACAG00000014490RPA19962.898Anolis_carolinensis
ENSLAFG00000015354RPA19887.705ENSANAG00000023456RPA19987.705Aotus_nancymaae
ENSLAFG00000015354RPA19363.465ENSACLG00000006640rpa19963.465Astatotilapia_calliptera
ENSLAFG00000015354RPA19954.985ENSACLG00000005223RPA19757.488Astatotilapia_calliptera
ENSLAFG00000015354RPA19960.386ENSAMXG00000008418rpa19960.772Astyanax_mexicanus
ENSLAFG00000015354RPA19990.484ENSBTAG00000009711RPA19990.484Bos_taurus
ENSLAFG00000015354RPA19987.097ENSCJAG00000001848RPA19987.097Callithrix_jacchus
ENSLAFG00000015354RPA19987.903ENSCAFG00000019249RPA19987.903Canis_familiaris
ENSLAFG00000015354RPA19987.903ENSCAFG00020009847RPA19987.903Canis_lupus_dingo
ENSLAFG00000015354RPA19989.677ENSCHIG00000026308RPA19989.677Capra_hircus
ENSLAFG00000015354RPA19988.084ENSTSYG00000003482-9988.084Carlito_syrichta
ENSLAFG00000015354RPA19984.430ENSCPOG00000000035RPA19984.430Cavia_porcellus
ENSLAFG00000015354RPA19975.923ENSCCAG00000010981RPA19975.923Cebus_capucinus
ENSLAFG00000015354RPA19980.899ENSCLAG00000015045-9980.899Chinchilla_lanigera
ENSLAFG00000015354RPA19985.714ENSCLAG00000005185-9985.714Chinchilla_lanigera
ENSLAFG00000015354RPA19975.120ENSCSAG00000013833RPA19975.962Chlorocebus_sabaeus
ENSLAFG00000015354RPA17093.593ENSCHOG00000009454-9993.593Choloepus_hoffmanni
ENSLAFG00000015354RPA19588.235ENSCHOG00000013540-9988.235Choloepus_hoffmanni
ENSLAFG00000015354RPA19975.806ENSCPBG00000020377RPA19977.163Chrysemys_picta_bellii
ENSLAFG00000015354RPA19941.308ENSCING00000023482-9941.308Ciona_intestinalis
ENSLAFG00000015354RPA19884.641ENSCANG00000030911RPA19984.641Colobus_angolensis_palliatus
ENSLAFG00000015354RPA19986.107ENSCGRG00001008197Rpa19986.591Cricetulus_griseus_chok1gshd
ENSLAFG00000015354RPA18285.323ENSCGRG00000000582Rpa19985.910Cricetulus_griseus_crigri
ENSLAFG00000015354RPA19950.720ENSCSEG00000012726RPA19852.324Cynoglossus_semilaevis
ENSLAFG00000015354RPA19959.516ENSCSEG00000013066rpa19959.516Cynoglossus_semilaevis
ENSLAFG00000015354RPA19663.545ENSCVAG00000019431rpa19963.605Cyprinodon_variegatus
ENSLAFG00000015354RPA19455.189ENSCVAG00000013446-9455.189Cyprinodon_variegatus
ENSLAFG00000015354RPA19961.935ENSDARG00000003938rpa19961.935Danio_rerio
ENSLAFG00000015354RPA19891.340ENSDNOG00000017218RPA19891.340Dasypus_novemcinctus
ENSLAFG00000015354RPA19986.935ENSDORG00000006199Rpa19986.935Dipodomys_ordii
ENSLAFG00000015354RPA19941.308FBgn0010173RpA-709841.561Drosophila_melanogaster
ENSLAFG00000015354RPA18490.625ENSETEG00000017608RPA18290.722Echinops_telfairi
ENSLAFG00000015354RPA19890.507ENSEASG00005009372RPA19891.775Equus_asinus_asinus
ENSLAFG00000015354RPA19990.484ENSECAG00000023886RPA19990.484Equus_caballus
ENSLAFG00000015354RPA16792.344ENSEEUG00000002186-6892.344Erinaceus_europaeus
ENSLAFG00000015354RPA19960.096ENSELUG00000021071rpa19960.256Esox_lucius
ENSLAFG00000015354RPA18854.809ENSELUG00000006136RPA19954.809Esox_lucius
ENSLAFG00000015354RPA19987.440ENSFCAG00000006306RPA19987.440Felis_catus
ENSLAFG00000015354RPA19972.873ENSFALG00000006575RPA19972.873Ficedula_albicollis
ENSLAFG00000015354RPA19986.517ENSFDAG00000007720RPA19986.517Fukomys_damarensis
ENSLAFG00000015354RPA19958.842ENSFHEG00000003580rpa19958.842Fundulus_heteroclitus
ENSLAFG00000015354RPA19957.581ENSGMOG00000010382rpa19957.581Gadus_morhua
ENSLAFG00000015354RPA19974.235ENSGALG00000003072RPA19974.235Gallus_gallus
ENSLAFG00000015354RPA19961.327ENSGAFG00000012916rpa19961.327Gambusia_affinis
ENSLAFG00000015354RPA19853.659ENSGAFG00000020953RPA19853.963Gambusia_affinis
ENSLAFG00000015354RPA19959.516ENSGACG00000010856rpa19959.516Gasterosteus_aculeatus
ENSLAFG00000015354RPA19975.484ENSGAGG00000013611RPA19975.484Gopherus_agassizii
ENSLAFG00000015354RPA19984.677ENSGGOG00000014186RPA19984.677Gorilla_gorilla
ENSLAFG00000015354RPA19961.774ENSHBUG00000017773rpa19961.774Haplochromis_burtoni
ENSLAFG00000015354RPA19651.967ENSHBUG00000009348RPA19951.967Haplochromis_burtoni
ENSLAFG00000015354RPA19986.838ENSHGLG00000008846RPA19986.838Heterocephalus_glaber_female
ENSLAFG00000015354RPA19974.157ENSHGLG00100002005-9974.157Heterocephalus_glaber_male
ENSLAFG00000015354RPA19986.838ENSHGLG00100017755-9986.838Heterocephalus_glaber_male
ENSLAFG00000015354RPA19982.183ENSHGLG00100000799-9982.183Heterocephalus_glaber_male
ENSLAFG00000015354RPA19843.780ENSHCOG00000000351RPA19843.780Hippocampus_comes
ENSLAFG00000015354RPA19960.256ENSHCOG00000001401rpa19960.577Hippocampus_comes
ENSLAFG00000015354RPA19960.835ENSIPUG00000004400rpa19960.835Ictalurus_punctatus
ENSLAFG00000015354RPA19882.982ENSSTOG00000022475RPA19882.982Ictidomys_tridecemlineatus
ENSLAFG00000015354RPA19587.899ENSJJAG00000000876Rpa19887.899Jaculus_jaculus
ENSLAFG00000015354RPA19961.003ENSKMAG00000005605rpa19961.712Kryptolebias_marmoratus
ENSLAFG00000015354RPA19953.333ENSKMAG00000000234RPA19953.333Kryptolebias_marmoratus
ENSLAFG00000015354RPA19960.484ENSLBEG00000021604rpa19960.484Labrus_bergylta
ENSLAFG00000015354RPA19762.415ENSLBEG00000002281RPA18462.500Labrus_bergylta
ENSLAFG00000015354RPA17966.329ENSLACG00000007210RPA19866.329Latimeria_chalumnae
ENSLAFG00000015354RPA110064.541ENSLOCG00000006397rpa19667.833Lepisosteus_oculatus
ENSLAFG00000015354RPA18388.932ENSMFAG00000036138-10089.922Macaca_fascicularis
ENSLAFG00000015354RPA19980.515ENSMMUG00000002442-9980.515Macaca_mulatta
ENSLAFG00000015354RPA19888.235ENSMMUG00000011604-9989.070Macaca_mulatta
ENSLAFG00000015354RPA19686.935ENSMNEG00000031632-9887.793Macaca_nemestrina
ENSLAFG00000015354RPA18784.926ENSMNEG00000029837-9986.667Macaca_nemestrina
ENSLAFG00000015354RPA19883.115ENSMLEG00000038768-9983.961Mandrillus_leucophaeus
ENSLAFG00000015354RPA19961.452ENSMAMG00000017993rpa19961.735Mastacembelus_armatus
ENSLAFG00000015354RPA19950.505ENSMAMG00000020097RPA19752.914Mastacembelus_armatus
ENSLAFG00000015354RPA19954.985ENSMZEG00005024731RPA19757.488Maylandia_zebra
ENSLAFG00000015354RPA19961.774ENSMZEG00005007551rpa19961.774Maylandia_zebra
ENSLAFG00000015354RPA19874.715ENSMGAG00000005315RPA19874.715Meleagris_gallopavo
ENSLAFG00000015354RPA19887.685ENSMAUG00000010474Rpa19987.685Mesocricetus_auratus
ENSLAFG00000015354RPA19988.226ENSMICG00000012867RPA19988.226Microcebus_murinus
ENSLAFG00000015354RPA19985.370ENSMOCG00000013019Rpa19985.370Microtus_ochrogaster
ENSLAFG00000015354RPA19860.848ENSMMOG00000014292rpa19962.000Mola_mola
ENSLAFG00000015354RPA19954.634ENSMMOG00000010868RPA19859.692Mola_mola
ENSLAFG00000015354RPA19982.258ENSMODG00000010549RPA19982.258Monodelphis_domestica
ENSLAFG00000015354RPA19962.520ENSMALG00000011453rpa19962.682Monopterus_albus
ENSLAFG00000015354RPA19660.310ENSMALG00000001208RPA18955.253Monopterus_albus
ENSLAFG00000015354RPA19984.976MGP_CAROLIEiJ_G0016734Rpa19985.299Mus_caroli
ENSLAFG00000015354RPA19984.653ENSMUSG00000000751Rpa19984.653Mus_musculus
ENSLAFG00000015354RPA19986.430MGP_PahariEiJ_G0017871Rpa19986.753Mus_pahari
ENSLAFG00000015354RPA19984.677MGP_SPRETEiJ_G0017577Rpa19984.677Mus_spretus
ENSLAFG00000015354RPA19988.226ENSMPUG00000013119RPA19988.226Mustela_putorius_furo
ENSLAFG00000015354RPA19788.284ENSMLUG00000006113RPA19688.284Myotis_lucifugus
ENSLAFG00000015354RPA19586.913ENSNGAG00000004522Rpa19486.913Nannospalax_galili
ENSLAFG00000015354RPA19655.316ENSNBRG00000009672RPA19555.316Neolamprologus_brichardi
ENSLAFG00000015354RPA19463.265ENSNBRG00000020595rpa19963.265Neolamprologus_brichardi
ENSLAFG00000015354RPA19986.452ENSNLEG00000017149RPA19987.118Nomascus_leucogenys
ENSLAFG00000015354RPA19872.668ENSMEUG00000006714RPA19972.668Notamacropus_eugenii
ENSLAFG00000015354RPA19585.378ENSODEG00000009038RPA19685.378Octodon_degus
ENSLAFG00000015354RPA19962.300ENSONIG00000013135rpa19962.300Oreochromis_niloticus
ENSLAFG00000015354RPA19883.142ENSOANG00000010880RPA19983.306Ornithorhynchus_anatinus
ENSLAFG00000015354RPA110088.958ENSOCUG00000001504RPA19988.958Oryctolagus_cuniculus
ENSLAFG00000015354RPA19962.097ENSORLG00000004856rpa19962.097Oryzias_latipes
ENSLAFG00000015354RPA19951.786ENSORLG00000003368RPA19754.488Oryzias_latipes
ENSLAFG00000015354RPA19951.023ENSORLG00020015284RPA19753.632Oryzias_latipes_hni
ENSLAFG00000015354RPA19962.097ENSORLG00020008980rpa19962.097Oryzias_latipes_hni
ENSLAFG00000015354RPA19952.273ENSORLG00015020383RPA19755.056Oryzias_latipes_hsok
ENSLAFG00000015354RPA16860.981ENSORLG00015005867-9760.981Oryzias_latipes_hsok
ENSLAFG00000015354RPA19962.097ENSORLG00015013982rpa19962.097Oryzias_latipes_hsok
ENSLAFG00000015354RPA19960.000ENSOMEG00000004704rpa19960.000Oryzias_melastigma
ENSLAFG00000015354RPA19852.730ENSOMEG00000011040RPA19955.312Oryzias_melastigma
ENSLAFG00000015354RPA19988.065ENSOGAG00000005581-9988.065Otolemur_garnettii
ENSLAFG00000015354RPA19485.223ENSOGAG00000029379-9989.840Otolemur_garnettii
ENSLAFG00000015354RPA19989.677ENSOARG00000014479RPA19989.677Ovis_aries
ENSLAFG00000015354RPA19987.097ENSPPAG00000039680RPA19987.762Pan_paniscus
ENSLAFG00000015354RPA19987.440ENSPPRG00000011807RPA19987.440Panthera_pardus
ENSLAFG00000015354RPA19987.279ENSPTIG00000007898RPA19987.279Panthera_tigris_altaica
ENSLAFG00000015354RPA19987.097ENSPTRG00000008539RPA19987.762Pan_troglodytes
ENSLAFG00000015354RPA19987.419ENSPANG00000024592RPA19988.245Papio_anubis
ENSLAFG00000015354RPA19460.781ENSPKIG00000008053rpa19361.356Paramormyrops_kingsleyae
ENSLAFG00000015354RPA19776.645ENSPSIG00000015617RPA19976.645Pelodiscus_sinensis
ENSLAFG00000015354RPA19860.948ENSPMGG00000011589rpa19961.111Periophthalmus_magnuspinnatus
ENSLAFG00000015354RPA19951.238ENSPMGG00000000543RPA19955.268Periophthalmus_magnuspinnatus
ENSLAFG00000015354RPA19986.591ENSPEMG00000021061Rpa19986.591Peromyscus_maniculatus_bairdii
ENSLAFG00000015354RPA19981.290ENSPCIG00000019049RPA19981.613Phascolarctos_cinereus
ENSLAFG00000015354RPA19961.327ENSPFOG00000003987rpa19961.327Poecilia_formosa
ENSLAFG00000015354RPA19552.181ENSPLAG00000008844-9752.181Poecilia_latipinna
ENSLAFG00000015354RPA19961.003ENSPLAG00000004984rpa19961.003Poecilia_latipinna
ENSLAFG00000015354RPA19961.489ENSPMEG00000020602rpa19962.522Poecilia_mexicana
ENSLAFG00000015354RPA19552.492ENSPMEG00000003627-9752.492Poecilia_mexicana
ENSLAFG00000015354RPA19950.431ENSPREG00000010119RPA110050.075Poecilia_reticulata
ENSLAFG00000015354RPA19355.214ENSPREG00000010174rpa19655.214Poecilia_reticulata
ENSLAFG00000015354RPA19988.710ENSPCOG00000001799RPA19988.710Propithecus_coquereli
ENSLAFG00000015354RPA19989.677ENSPVAG00000002149RPA19989.677Pteropus_vampyrus
ENSLAFG00000015354RPA19954.683ENSPNYG00000024165RPA19757.166Pundamilia_nyererei
ENSLAFG00000015354RPA19961.935ENSPNYG00000016316rpa19963.419Pundamilia_nyererei
ENSLAFG00000015354RPA19953.760ENSPNAG00000008599rpa19854.400Pygocentrus_nattereri
ENSLAFG00000015354RPA19986.268ENSRNOG00000003123Rpa19986.268Rattus_norvegicus
ENSLAFG00000015354RPA19987.279ENSRBIG00000036587RPA19987.279Rhinopithecus_bieti
ENSLAFG00000015354RPA19982.287ENSRROG00000043278RPA19982.287Rhinopithecus_roxellana
ENSLAFG00000015354RPA16738.824YAR007CRFA16838.824Saccharomyces_cerevisiae
ENSLAFG00000015354RPA19884.288ENSSBOG00000030233RPA19984.288Saimiri_boliviensis_boliviensis
ENSLAFG00000015354RPA19883.142ENSSHAG00000007969RPA19783.687Sarcophilus_harrisii
ENSLAFG00000015354RPA19963.430ENSSFOG00015005362rpa19163.430Scleropages_formosus
ENSLAFG00000015354RPA19952.259ENSSMAG00000019746RPA19952.259Scophthalmus_maximus
ENSLAFG00000015354RPA19951.765ENSSDUG00000016358RPA19160.833Seriola_dumerili
ENSLAFG00000015354RPA19962.419ENSSDUG00000011949rpa19962.419Seriola_dumerili
ENSLAFG00000015354RPA19962.742ENSSLDG00000011806rpa19962.742Seriola_lalandi_dorsalis
ENSLAFG00000015354RPA19951.684ENSSLDG00000020784RPA19948.755Seriola_lalandi_dorsalis
ENSLAFG00000015354RPA19869.935ENSSARG00000007506RPA19969.935Sorex_araneus
ENSLAFG00000015354RPA19772.517ENSSPUG00000007223RPA19972.517Sphenodon_punctatus
ENSLAFG00000015354RPA19961.129ENSSPAG00000009903rpa19961.129Stegastes_partitus
ENSLAFG00000015354RPA19557.479ENSSPAG00000011165RPA19757.479Stegastes_partitus
ENSLAFG00000015354RPA19891.311ENSSSCG00000017822RPA19991.311Sus_scrofa
ENSLAFG00000015354RPA19972.947ENSTGUG00000005775RPA19972.947Taeniopygia_guttata
ENSLAFG00000015354RPA19961.974ENSTRUG00000003616rpa19961.974Takifugu_rubripes
ENSLAFG00000015354RPA19658.097ENSTRUG00000000405RPA19748.844Takifugu_rubripes
ENSLAFG00000015354RPA19962.862ENSTNIG00000016199rpa19962.862Tetraodon_nigroviridis
ENSLAFG00000015354RPA18697.674ENSTBEG00000002709RPA18897.674Tupaia_belangeri
ENSLAFG00000015354RPA19988.710ENSTTRG00000001169RPA19988.710Tursiops_truncatus
ENSLAFG00000015354RPA18994.231ENSUAMG00000015676RPA19794.231Ursus_americanus
ENSLAFG00000015354RPA19989.677ENSUMAG00000009328RPA19989.677Ursus_maritimus
ENSLAFG00000015354RPA19888.399ENSVPAG00000009443RPA19888.399Vicugna_pacos
ENSLAFG00000015354RPA19988.226ENSVVUG00000021715RPA19988.226Vulpes_vulpes
ENSLAFG00000015354RPA110071.132ENSXETG00000013538rpa19972.756Xenopus_tropicalis
ENSLAFG00000015354RPA19555.724ENSXCOG00000009899-9955.724Xiphophorus_couchianus
ENSLAFG00000015354RPA19459.524ENSXCOG00000010068rpa19659.524Xiphophorus_couchianus
ENSLAFG00000015354RPA19759.714ENSXMAG00000010333RPA19259.714Xiphophorus_maculatus
ENSLAFG00000015354RPA19960.194ENSXMAG00000004102rpa19961.979Xiphophorus_maculatus

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