EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000015374 (Gene tree)
Gene ID: -
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 142973 bases
Position: chrscaffold_43:4810378-4953350
Accession: 100660596
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000012891	ResIII	PF04851.15	4.6e-06	1	1
ENSLAFP00000012891	BRK	PF07533.16	9.8e-31	1	2
ENSLAFP00000012891	BRK	PF07533.16	9.8e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000029006	CHD9-202	1437	-	ENSLAFP00000028529	479 (aa)	-	G3UL20
ENSLAFT00000015383	CHD9-201	8709	-	ENSLAFP00000012891	2903 (aa)	XP_023411370	G3TF17

Gene Model

Click here to download ENSLAFG00000015374's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000015374's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000015374	CHD9	85	70.422	ENSLAFG00000000403	CHD7	93	54.271
ENSLAFG00000015374	CHD9	70	66.502	ENSLAFG00000012144	CHD6	80	62.564

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000015374	CHD9	100	95.040	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSLAFG00000015374	CHD9	79	70.050	ENSAPOG00000023034	chd9	66	74.762	Acanthochromis_polyacanthus
ENSLAFG00000015374	CHD9	100	95.250	ENSAMEG00000016232	CHD9	100	95.250	Ailuropoda_melanoleuca
ENSLAFG00000015374	CHD9	55	73.063	ENSACIG00000004097	chd9	73	60.944	Amphilophus_citrinellus
ENSLAFG00000015374	CHD9	79	69.925	ENSAOCG00000005487	chd9	67	74.822	Amphiprion_ocellaris
ENSLAFG00000015374	CHD9	79	70.050	ENSAPEG00000009859	chd9	67	74.762	Amphiprion_percula
ENSLAFG00000015374	CHD9	80	70.261	ENSATEG00000002748	chd9	100	61.726	Anabas_testudineus
ENSLAFG00000015374	CHD9	99	83.877	ENSAPLG00000002826	CHD9	74	85.835	Anas_platyrhynchos
ENSLAFG00000015374	CHD9	99	80.727	ENSACAG00000016150	CHD9	98	81.073	Anolis_carolinensis
ENSLAFG00000015374	CHD9	100	95.453	ENSANAG00000015630	CHD9	100	95.971	Aotus_nancymaae
ENSLAFG00000015374	CHD9	79	69.798	ENSACLG00000016899	chd9	73	62.722	Astatotilapia_calliptera
ENSLAFG00000015374	CHD9	81	68.425	ENSAMXG00000005652	chd9	68	74.598	Astyanax_mexicanus
ENSLAFG00000015374	CHD9	100	94.490	ENSBTAG00000002287	CHD9	100	94.387	Bos_taurus
ENSLAFG00000015374	CHD9	100	94.215	ENSCJAG00000001573	CHD9	100	96.337	Callithrix_jacchus
ENSLAFG00000015374	CHD9	100	95.384	ENSCAFG00000009699	CHD9	100	95.419	Canis_familiaris
ENSLAFG00000015374	CHD9	100	95.384	ENSCAFG00020002879	CHD9	100	97.070	Canis_lupus_dingo
ENSLAFG00000015374	CHD9	100	95.212	ENSTSYG00000007693	CHD9	100	97.070	Carlito_syrichta
ENSLAFG00000015374	CHD9	81	77.768	ENSCAPG00000011604	CHD9	81	78.607	Cavia_aperea
ENSLAFG00000015374	CHD9	100	90.806	ENSCPOG00000036544	CHD9	100	90.393	Cavia_porcellus
ENSLAFG00000015374	CHD9	100	94.695	ENSCCAG00000036178	CHD9	100	95.604	Cebus_capucinus
ENSLAFG00000015374	CHD9	100	94.456	ENSCATG00000036753	CHD9	100	95.971	Cercocebus_atys
ENSLAFG00000015374	CHD9	99	94.279	ENSCLAG00000007137	CHD9	99	95.607	Chinchilla_lanigera
ENSLAFG00000015374	CHD9	100	94.423	ENSCSAG00000005311	CHD9	100	94.836	Chlorocebus_sabaeus
ENSLAFG00000015374	CHD9	74	98.077	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSLAFG00000015374	CHD9	99	84.882	ENSCPBG00000012459	CHD9	99	91.618	Chrysemys_picta_bellii
ENSLAFG00000015374	CHD9	100	94.972	ENSCANG00000030349	CHD9	100	95.971	Colobus_angolensis_palliatus
ENSLAFG00000015374	CHD9	99	91.253	ENSCGRG00001016150	Chd9	99	90.594	Cricetulus_griseus_chok1gshd
ENSLAFG00000015374	CHD9	99	91.253	ENSCGRG00000012850	Chd9	99	94.913	Cricetulus_griseus_crigri
ENSLAFG00000015374	CHD9	84	68.135	ENSCSEG00000009209	chd9	67	72.169	Cynoglossus_semilaevis
ENSLAFG00000015374	CHD9	85	70.253	ENSCVAG00000016195	chd9	73	62.046	Cyprinodon_variegatus
ENSLAFG00000015374	CHD9	55	73.982	ENSDARG00000074498	chd9	68	73.725	Danio_rerio
ENSLAFG00000015374	CHD9	81	95.198	ENSDNOG00000006045	CHD9	100	95.198	Dasypus_novemcinctus
ENSLAFG00000015374	CHD9	69	93.158	ENSDORG00000008523	-	100	92.662	Dipodomys_ordii
ENSLAFG00000015374	CHD9	94	97.368	ENSETEG00000009565	CHD9	94	97.368	Echinops_telfairi
ENSLAFG00000015374	CHD9	99	94.936	ENSEASG00005014832	CHD9	100	94.936	Equus_asinus_asinus
ENSLAFG00000015374	CHD9	100	95.007	ENSECAG00000011505	CHD9	100	95.007	Equus_caballus
ENSLAFG00000015374	CHD9	83	97.238	ENSEEUG00000014515	CHD9	86	97.238	Erinaceus_europaeus
ENSLAFG00000015374	CHD9	74	74.870	ENSELUG00000006031	chd9	94	74.357	Esox_lucius
ENSLAFG00000015374	CHD9	100	94.833	ENSFCAG00000022534	CHD9	100	96.703	Felis_catus
ENSLAFG00000015374	CHD9	83	86.964	ENSFALG00000013276	CHD9	99	87.297	Ficedula_albicollis
ENSLAFG00000015374	CHD9	100	94.180	ENSFDAG00000021037	CHD9	100	93.733	Fukomys_damarensis
ENSLAFG00000015374	CHD9	84	69.523	ENSFHEG00000006068	chd9	68	74.286	Fundulus_heteroclitus
ENSLAFG00000015374	CHD9	67	76.662	ENSGMOG00000006040	chd9	83	76.662	Gadus_morhua
ENSLAFG00000015374	CHD9	96	84.912	ENSGALG00000039178	CHD9	99	84.856	Gallus_gallus
ENSLAFG00000015374	CHD9	84	69.558	ENSGAFG00000010014	chd9	67	74.762	Gambusia_affinis
ENSLAFG00000015374	CHD9	79	68.172	ENSGACG00000016694	chd9	96	74.634	Gasterosteus_aculeatus
ENSLAFG00000015374	CHD9	100	94.938	ENSGGOG00000014816	CHD9	100	96.337	Gorilla_gorilla
ENSLAFG00000015374	CHD9	79	70.333	ENSHBUG00000023322	chd9	96	68.041	Haplochromis_burtoni
ENSLAFG00000015374	CHD9	100	93.871	ENSHGLG00000014938	CHD9	99	96.647	Heterocephalus_glaber_female
ENSLAFG00000015374	CHD9	90	66.212	ENSHCOG00000000937	chd9	69	73.274	Hippocampus_comes
ENSLAFG00000015374	CHD9	80	69.595	ENSIPUG00000016448	chd9	92	72.143	Ictalurus_punctatus
ENSLAFG00000015374	CHD9	100	94.178	ENSSTOG00000022273	CHD9	99	96.532	Ictidomys_tridecemlineatus
ENSLAFG00000015374	CHD9	69	93.247	ENSJJAG00000015741	-	100	93.247	Jaculus_jaculus
ENSLAFG00000015374	CHD9	80	69.470	ENSKMAG00000016784	chd9	66	74.613	Kryptolebias_marmoratus
ENSLAFG00000015374	CHD9	92	62.233	ENSLBEG00000012077	chd9	66	73.389	Labrus_bergylta
ENSLAFG00000015374	CHD9	99	71.830	ENSLACG00000005557	CHD9	73	72.057	Latimeria_chalumnae
ENSLAFG00000015374	CHD9	87	72.543	ENSLOCG00000007225	chd9	68	80.192	Lepisosteus_oculatus
ENSLAFG00000015374	CHD9	100	94.972	ENSMFAG00000041354	CHD9	100	95.971	Macaca_fascicularis
ENSLAFG00000015374	CHD9	100	95.007	ENSMMUG00000016310	CHD9	100	95.971	Macaca_mulatta
ENSLAFG00000015374	CHD9	100	94.940	ENSMNEG00000031494	CHD9	100	95.183	Macaca_nemestrina
ENSLAFG00000015374	CHD9	100	95.076	ENSMLEG00000043219	CHD9	100	95.971	Mandrillus_leucophaeus
ENSLAFG00000015374	CHD9	79	69.563	ENSMAMG00000003909	chd9	73	62.369	Mastacembelus_armatus
ENSLAFG00000015374	CHD9	84	70.401	ENSMZEG00005006581	chd9	67	75.074	Maylandia_zebra
ENSLAFG00000015374	CHD9	95	79.538	ENSMGAG00000004642	CHD9	72	80.863	Meleagris_gallopavo
ENSLAFG00000015374	CHD9	100	94.592	ENSMICG00000016679	CHD9	100	95.238	Microcebus_murinus
ENSLAFG00000015374	CHD9	73	81.567	ENSMODG00000013142	-	99	92.235	Monodelphis_domestica
ENSLAFG00000015374	CHD9	80	69.525	ENSMALG00000013306	chd9	73	61.604	Monopterus_albus
ENSLAFG00000015374	CHD9	99	90.149	MGP_CAROLIEiJ_G0031364	Chd9	99	89.906	Mus_caroli
ENSLAFG00000015374	CHD9	99	89.868	ENSMUSG00000056608	Chd9	99	94.220	Mus_musculus
ENSLAFG00000015374	CHD9	99	88.115	MGP_PahariEiJ_G0022964	Chd9	99	87.907	Mus_pahari
ENSLAFG00000015374	CHD9	99	89.972	MGP_SPRETEiJ_G0032483	Chd9	99	89.833	Mus_spretus
ENSLAFG00000015374	CHD9	100	94.971	ENSMPUG00000003285	CHD9	100	94.936	Mustela_putorius_furo
ENSLAFG00000015374	CHD9	100	94.247	ENSMLUG00000004456	CHD9	100	93.903	Myotis_lucifugus
ENSLAFG00000015374	CHD9	84	70.054	ENSNBRG00000009423	chd9	67	75.000	Neolamprologus_brichardi
ENSLAFG00000015374	CHD9	90	95.364	ENSNLEG00000001026	CHD9	100	95.364	Nomascus_leucogenys
ENSLAFG00000015374	CHD9	76	96.732	ENSMEUG00000008222	-	84	96.732	Notamacropus_eugenii
ENSLAFG00000015374	CHD9	85	97.143	ENSOPRG00000011168	CHD9	85	97.143	Ochotona_princeps
ENSLAFG00000015374	CHD9	99	93.652	ENSODEG00000004466	CHD9	99	93.410	Octodon_degus
ENSLAFG00000015374	CHD9	80	70.985	ENSONIG00000002816	chd9	87	62.761	Oreochromis_niloticus
ENSLAFG00000015374	CHD9	100	86.722	ENSOANG00000013401	CHD9	100	87.100	Ornithorhynchus_anatinus
ENSLAFG00000015374	CHD9	83	96.318	ENSOCUG00000001016	CHD9	99	96.318	Oryctolagus_cuniculus
ENSLAFG00000015374	CHD9	84	69.796	ENSORLG00000013810	chd9	67	74.030	Oryzias_latipes
ENSLAFG00000015374	CHD9	84	69.734	ENSORLG00015019126	chd9	81	61.987	Oryzias_latipes_hsok
ENSLAFG00000015374	CHD9	100	93.875	ENSOGAG00000002110	CHD9	100	93.634	Otolemur_garnettii
ENSLAFG00000015374	CHD9	100	94.152	ENSOARG00000017664	CHD9	100	94.083	Ovis_aries
ENSLAFG00000015374	CHD9	83	95.232	ENSPPAG00000039388	-	100	95.232	Pan_paniscus
ENSLAFG00000015374	CHD9	100	94.833	ENSPPRG00000004801	CHD9	100	96.703	Panthera_pardus
ENSLAFG00000015374	CHD9	100	93.800	ENSPTIG00000021854	CHD9	100	93.800	Panthera_tigris_altaica
ENSLAFG00000015374	CHD9	100	95.212	ENSPTRG00000008113	CHD9	100	96.337	Pan_troglodytes
ENSLAFG00000015374	CHD9	100	94.972	ENSPANG00000019307	CHD9	100	95.971	Papio_anubis
ENSLAFG00000015374	CHD9	98	58.788	ENSPKIG00000025401	-	71	62.589	Paramormyrops_kingsleyae
ENSLAFG00000015374	CHD9	97	62.530	ENSPKIG00000021876	chd9	68	76.390	Paramormyrops_kingsleyae
ENSLAFG00000015374	CHD9	64	85.089	ENSPSIG00000008099	CHD9	99	85.089	Pelodiscus_sinensis
ENSLAFG00000015374	CHD9	59	57.045	ENSPMAG00000006035	-	72	67.657	Petromyzon_marinus
ENSLAFG00000015374	CHD9	89	88.053	ENSPCIG00000017215	CHD9	97	89.274	Phascolarctos_cinereus
ENSLAFG00000015374	CHD9	84	69.662	ENSPFOG00000015839	chd9	66	71.421	Poecilia_formosa
ENSLAFG00000015374	CHD9	84	69.745	ENSPLAG00000011118	chd9	66	74.851	Poecilia_latipinna
ENSLAFG00000015374	CHD9	84	70.259	ENSPMEG00000015106	chd9	63	70.941	Poecilia_mexicana
ENSLAFG00000015374	CHD9	84	70.146	ENSPREG00000006473	chd9	89	66.718	Poecilia_reticulata
ENSLAFG00000015374	CHD9	100	95.074	ENSPPYG00000007348	CHD9	100	95.074	Pongo_abelii
ENSLAFG00000015374	CHD9	77	96.599	ENSPCAG00000007564	CHD9	86	96.599	Procavia_capensis
ENSLAFG00000015374	CHD9	100	93.558	ENSPCOG00000028433	CHD9	100	96.337	Propithecus_coquereli
ENSLAFG00000015374	CHD9	97	92.795	ENSPVAG00000015617	CHD9	98	92.756	Pteropus_vampyrus
ENSLAFG00000015374	CHD9	84	70.313	ENSPNYG00000010947	chd9	66	75.000	Pundamilia_nyererei
ENSLAFG00000015374	CHD9	86	67.555	ENSPNAG00000024141	chd9	68	74.836	Pygocentrus_nattereri
ENSLAFG00000015374	CHD9	90	87.424	ENSRNOG00000049302	Chd9	100	89.277	Rattus_norvegicus
ENSLAFG00000015374	CHD9	83	95.697	ENSRBIG00000035553	CHD9	100	95.971	Rhinopithecus_bieti
ENSLAFG00000015374	CHD9	82	96.119	ENSRROG00000033278	CHD9	100	96.119	Rhinopithecus_roxellana
ENSLAFG00000015374	CHD9	100	95.074	ENSSBOG00000030240	CHD9	100	95.604	Saimiri_boliviensis_boliviensis
ENSLAFG00000015374	CHD9	99	88.162	ENSSHAG00000002719	CHD9	100	88.175	Sarcophilus_harrisii
ENSLAFG00000015374	CHD9	97	62.910	ENSSFOG00015020209	chd9	99	69.622	Scleropages_formosus
ENSLAFG00000015374	CHD9	86	66.823	ENSSFOG00015001327	chd9	67	75.121	Scleropages_formosus
ENSLAFG00000015374	CHD9	84	68.854	ENSSMAG00000008953	chd9	99	61.762	Scophthalmus_maximus
ENSLAFG00000015374	CHD9	84	70.008	ENSSDUG00000006139	chd9	67	74.511	Seriola_dumerili
ENSLAFG00000015374	CHD9	84	70.606	ENSSLDG00000017818	chd9	67	74.452	Seriola_lalandi_dorsalis
ENSLAFG00000015374	CHD9	71	97.089	ENSSARG00000010632	CHD9	71	97.089	Sorex_araneus
ENSLAFG00000015374	CHD9	84	69.963	ENSSPAG00000021649	chd9	67	74.540	Stegastes_partitus
ENSLAFG00000015374	CHD9	99	91.938	ENSSSCG00000033591	CHD9	75	95.087	Sus_scrofa
ENSLAFG00000015374	CHD9	90	84.862	ENSTGUG00000007476	CHD9	100	85.627	Taeniopygia_guttata
ENSLAFG00000015374	CHD9	60	75.046	ENSTRUG00000009125	chd9	73	62.075	Takifugu_rubripes
ENSLAFG00000015374	CHD9	57	81.951	ENSTNIG00000003825	chd9	85	81.951	Tetraodon_nigroviridis
ENSLAFG00000015374	CHD9	66	95.045	ENSTBEG00000016052	-	81	95.045	Tupaia_belangeri
ENSLAFG00000015374	CHD9	90	94.253	ENSTTRG00000012674	CHD9	90	94.253	Tursiops_truncatus
ENSLAFG00000015374	CHD9	64	94.433	ENSUAMG00000022706	CHD9	100	97.070	Ursus_americanus
ENSLAFG00000015374	CHD9	90	93.051	ENSUMAG00000004043	CHD9	99	98.081	Ursus_maritimus
ENSLAFG00000015374	CHD9	97	94.028	ENSVPAG00000001374	CHD9	97	94.038	Vicugna_pacos
ENSLAFG00000015374	CHD9	100	95.453	ENSVVUG00000019435	CHD9	100	95.487	Vulpes_vulpes
ENSLAFG00000015374	CHD9	99	72.931	ENSXETG00000000349	chd9	96	76.511	Xenopus_tropicalis
ENSLAFG00000015374	CHD9	80	70.388	ENSXCOG00000012997	chd9	67	74.806	Xiphophorus_couchianus
ENSLAFG00000015374	CHD9	84	70.042	ENSXMAG00000016192	chd9	67	75.898	Xiphophorus_maculatus