EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000015626 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 32032 bases
Position: chrscaffold_129:1485587-1517618
Accession: 100657402
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000013115	ResIII	PF04851.15	6.8e-26	1	2
ENSLAFP00000013115	ResIII	PF04851.15	6.8e-26	2	2
ENSLAFP00000013115	DEAD	PF00270.29	2.5e-52	1	2
ENSLAFP00000013115	DEAD	PF00270.29	2.5e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000015641	SNRNP200-201	6411	XM_003421999	ENSLAFP00000013115	2136 (aa)	XP_003422047	G3TFK2

Gene Model

Click here to download ENSLAFG00000015626's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000015626's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000015626	SNRNP200	78	45.579	ENSLAFG00000011363	ASCC3	75	45.579
ENSLAFG00000015626	SNRNP200	62	33.048	ENSLAFG00000015903	-	91	33.048

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000015626	SNRNP200	100	99.485	ENSG00000144028	SNRNP200	100	99.485	Homo_sapiens
ENSLAFG00000015626	SNRNP200	99	90.794	ENSAPOG00000010223	snrnp200	99	90.684	Acanthochromis_polyacanthus
ENSLAFG00000015626	SNRNP200	100	99.532	ENSAMEG00000008996	SNRNP200	100	99.532	Ailuropoda_melanoleuca
ENSLAFG00000015626	SNRNP200	97	89.936	ENSACIG00000001764	snrnp200	98	89.936	Amphilophus_citrinellus
ENSLAFG00000015626	SNRNP200	99	90.700	ENSAOCG00000024593	snrnp200	100	89.775	Amphiprion_ocellaris
ENSLAFG00000015626	SNRNP200	97	89.829	ENSAPEG00000012554	snrnp200	100	89.829	Amphiprion_percula
ENSLAFG00000015626	SNRNP200	99	90.559	ENSATEG00000022522	snrnp200	99	90.449	Anabas_testudineus
ENSLAFG00000015626	SNRNP200	99	97.548	ENSAPLG00000004313	SNRNP200	100	97.548	Anas_platyrhynchos
ENSLAFG00000015626	SNRNP200	99	97.148	ENSACAG00000000434	SNRNP200	100	97.148	Anolis_carolinensis
ENSLAFG00000015626	SNRNP200	100	94.916	ENSANAG00000036625	SNRNP200	100	95.336	Aotus_nancymaae
ENSLAFG00000015626	SNRNP200	99	90.371	ENSACLG00000011188	snrnp200	99	90.262	Astatotilapia_calliptera
ENSLAFG00000015626	SNRNP200	99	90.371	ENSAMXG00000005684	snrnp200	99	90.262	Astyanax_mexicanus
ENSLAFG00000015626	SNRNP200	100	99.110	ENSBTAG00000000848	SNRNP200	100	99.110	Bos_taurus
ENSLAFG00000015626	SNRNP200	100	99.438	ENSCJAG00000007514	SNRNP200	100	99.438	Callithrix_jacchus
ENSLAFG00000015626	SNRNP200	100	98.740	ENSCAFG00020019979	SNRNP200	100	99.650	Canis_lupus_dingo
ENSLAFG00000015626	SNRNP200	100	99.251	ENSCHIG00000020611	SNRNP200	100	99.251	Capra_hircus
ENSLAFG00000015626	SNRNP200	100	99.485	ENSTSYG00000010467	SNRNP200	100	99.485	Carlito_syrichta
ENSLAFG00000015626	SNRNP200	99	99.201	ENSCAPG00000017234	SNRNP200	99	99.201	Cavia_aperea
ENSLAFG00000015626	SNRNP200	100	99.485	ENSCPOG00000006776	SNRNP200	100	99.485	Cavia_porcellus
ENSLAFG00000015626	SNRNP200	100	99.438	ENSCCAG00000033962	SNRNP200	100	99.438	Cebus_capucinus
ENSLAFG00000015626	SNRNP200	100	99.485	ENSCATG00000015790	SNRNP200	100	99.485	Cercocebus_atys
ENSLAFG00000015626	SNRNP200	100	99.438	ENSCLAG00000004116	SNRNP200	100	99.438	Chinchilla_lanigera
ENSLAFG00000015626	SNRNP200	100	99.438	ENSCSAG00000017369	SNRNP200	100	99.438	Chlorocebus_sabaeus
ENSLAFG00000015626	SNRNP200	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSLAFG00000015626	SNRNP200	100	97.522	ENSCPBG00000022571	SNRNP200	100	97.522	Chrysemys_picta_bellii
ENSLAFG00000015626	SNRNP200	99	76.460	ENSCING00000005082	-	99	76.600	Ciona_intestinalis
ENSLAFG00000015626	SNRNP200	100	93.975	ENSCANG00000033932	SNRNP200	100	99.403	Colobus_angolensis_palliatus
ENSLAFG00000015626	SNRNP200	100	99.438	ENSCGRG00001022610	Snrnp200	100	99.438	Cricetulus_griseus_chok1gshd
ENSLAFG00000015626	SNRNP200	100	98.878	ENSCGRG00000016472	Snrnp200	100	98.878	Cricetulus_griseus_crigri
ENSLAFG00000015626	SNRNP200	100	89.841	ENSCSEG00000016399	snrnp200	100	89.841	Cynoglossus_semilaevis
ENSLAFG00000015626	SNRNP200	100	85.487	ENSCVAG00000017631	snrnp200	99	85.487	Cyprinodon_variegatus
ENSLAFG00000015626	SNRNP200	100	90.122	ENSDARG00000077536	snrnp200	99	90.122	Danio_rerio
ENSLAFG00000015626	SNRNP200	100	98.081	ENSDNOG00000011227	SNRNP200	100	98.081	Dasypus_novemcinctus
ENSLAFG00000015626	SNRNP200	100	96.727	ENSDORG00000005861	Snrnp200	100	96.727	Dipodomys_ordii
ENSLAFG00000015626	SNRNP200	100	74.395	FBgn0263599	l(3)72Ab	99	74.302	Drosophila_melanogaster
ENSLAFG00000015626	SNRNP200	95	99.397	ENSETEG00000000162	SNRNP200	74	99.397	Echinops_telfairi
ENSLAFG00000015626	SNRNP200	83	81.435	ENSEBUG00000016524	snrnp200	95	81.435	Eptatretus_burgeri
ENSLAFG00000015626	SNRNP200	100	98.508	ENSEASG00005001884	SNRNP200	100	98.508	Equus_asinus_asinus
ENSLAFG00000015626	SNRNP200	100	99.625	ENSECAG00000019675	SNRNP200	100	99.625	Equus_caballus
ENSLAFG00000015626	SNRNP200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSLAFG00000015626	SNRNP200	99	90.841	ENSELUG00000018948	snrnp200	99	90.730	Esox_lucius
ENSLAFG00000015626	SNRNP200	100	99.579	ENSFCAG00000010699	SNRNP200	100	99.579	Felis_catus
ENSLAFG00000015626	SNRNP200	93	92.857	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSLAFG00000015626	SNRNP200	100	99.298	ENSFDAG00000004683	SNRNP200	100	99.298	Fukomys_damarensis
ENSLAFG00000015626	SNRNP200	100	87.734	ENSFHEG00000003786	snrnp200	99	87.734	Fundulus_heteroclitus
ENSLAFG00000015626	SNRNP200	100	89.673	ENSGMOG00000004881	snrnp200	99	89.626	Gadus_morhua
ENSLAFG00000015626	SNRNP200	100	87.968	ENSGAFG00000010807	snrnp200	99	87.968	Gambusia_affinis
ENSLAFG00000015626	SNRNP200	100	89.911	ENSGACG00000011474	snrnp200	99	89.818	Gasterosteus_aculeatus
ENSLAFG00000015626	SNRNP200	95	97.992	ENSGAGG00000016069	SNRNP200	99	97.429	Gopherus_agassizii
ENSLAFG00000015626	SNRNP200	100	99.485	ENSGGOG00000005174	SNRNP200	100	99.485	Gorilla_gorilla
ENSLAFG00000015626	SNRNP200	97	87.460	ENSHBUG00000011322	snrnp200	99	87.507	Haplochromis_burtoni
ENSLAFG00000015626	SNRNP200	100	99.391	ENSHGLG00000006654	SNRNP200	100	99.391	Heterocephalus_glaber_female
ENSLAFG00000015626	SNRNP200	100	99.391	ENSHGLG00100018594	SNRNP200	100	99.391	Heterocephalus_glaber_male
ENSLAFG00000015626	SNRNP200	100	99.532	ENSSTOG00000016351	SNRNP200	100	99.532	Ictidomys_tridecemlineatus
ENSLAFG00000015626	SNRNP200	100	99.298	ENSJJAG00000023659	Snrnp200	100	99.298	Jaculus_jaculus
ENSLAFG00000015626	SNRNP200	100	87.494	ENSKMAG00000003665	snrnp200	99	87.494	Kryptolebias_marmoratus
ENSLAFG00000015626	SNRNP200	100	90.169	ENSLBEG00000021585	snrnp200	99	90.169	Labrus_bergylta
ENSLAFG00000015626	SNRNP200	82	94.836	ENSLACG00000000226	SNRNP200	99	94.836	Latimeria_chalumnae
ENSLAFG00000015626	SNRNP200	100	92.135	ENSLOCG00000015198	snrnp200	99	92.135	Lepisosteus_oculatus
ENSLAFG00000015626	SNRNP200	100	99.438	ENSMFAG00000040174	SNRNP200	100	99.438	Macaca_fascicularis
ENSLAFG00000015626	SNRNP200	100	99.438	ENSMMUG00000023261	SNRNP200	100	99.438	Macaca_mulatta
ENSLAFG00000015626	SNRNP200	100	99.391	ENSMNEG00000032398	SNRNP200	100	99.391	Macaca_nemestrina
ENSLAFG00000015626	SNRNP200	100	99.485	ENSMLEG00000019083	SNRNP200	100	99.485	Mandrillus_leucophaeus
ENSLAFG00000015626	SNRNP200	100	90.080	ENSMAMG00000007851	snrnp200	99	90.033	Mastacembelus_armatus
ENSLAFG00000015626	SNRNP200	97	87.460	ENSMZEG00005010787	snrnp200	99	87.507	Maylandia_zebra
ENSLAFG00000015626	SNRNP200	97	97.097	ENSMGAG00000001831	SNRNP200	100	97.097	Meleagris_gallopavo
ENSLAFG00000015626	SNRNP200	100	99.391	ENSMAUG00000011825	Snrnp200	100	99.391	Mesocricetus_auratus
ENSLAFG00000015626	SNRNP200	100	99.438	ENSMICG00000004710	SNRNP200	100	99.438	Microcebus_murinus
ENSLAFG00000015626	SNRNP200	100	96.816	ENSMOCG00000011814	Snrnp200	100	96.816	Microtus_ochrogaster
ENSLAFG00000015626	SNRNP200	99	88.915	ENSMMOG00000014167	snrnp200	99	88.811	Mola_mola
ENSLAFG00000015626	SNRNP200	100	98.736	ENSMODG00000008475	SNRNP200	100	98.736	Monodelphis_domestica
ENSLAFG00000015626	SNRNP200	99	90.700	ENSMALG00000001973	snrnp200	99	90.590	Monopterus_albus
ENSLAFG00000015626	SNRNP200	100	99.298	MGP_CAROLIEiJ_G0024250	Snrnp200	100	99.298	Mus_caroli
ENSLAFG00000015626	SNRNP200	100	99.345	ENSMUSG00000003660	Snrnp200	100	99.345	Mus_musculus
ENSLAFG00000015626	SNRNP200	100	99.391	MGP_PahariEiJ_G0025695	Snrnp200	100	99.391	Mus_pahari
ENSLAFG00000015626	SNRNP200	100	99.345	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.345	Mus_spretus
ENSLAFG00000015626	SNRNP200	100	99.579	ENSMPUG00000008949	SNRNP200	100	99.579	Mustela_putorius_furo
ENSLAFG00000015626	SNRNP200	100	95.318	ENSMLUG00000027511	-	100	95.318	Myotis_lucifugus
ENSLAFG00000015626	SNRNP200	100	98.925	ENSMLUG00000010493	SNRNP200	100	98.925	Myotis_lucifugus
ENSLAFG00000015626	SNRNP200	100	99.485	ENSNGAG00000021993	Snrnp200	100	99.485	Nannospalax_galili
ENSLAFG00000015626	SNRNP200	90	89.971	ENSNBRG00000017960	snrnp200	98	89.971	Neolamprologus_brichardi
ENSLAFG00000015626	SNRNP200	100	94.840	ENSNLEG00000000025	SNRNP200	100	94.840	Nomascus_leucogenys
ENSLAFG00000015626	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSLAFG00000015626	SNRNP200	100	95.552	ENSOPRG00000015464	SNRNP200	100	95.552	Ochotona_princeps
ENSLAFG00000015626	SNRNP200	100	99.438	ENSODEG00000008366	SNRNP200	100	99.438	Octodon_degus
ENSLAFG00000015626	SNRNP200	99	90.371	ENSONIG00000010714	snrnp200	99	90.262	Oreochromis_niloticus
ENSLAFG00000015626	SNRNP200	100	99.345	ENSOCUG00000009864	SNRNP200	100	99.345	Oryctolagus_cuniculus
ENSLAFG00000015626	SNRNP200	100	90.075	ENSORLG00000012286	snrnp200	100	90.075	Oryzias_latipes
ENSLAFG00000015626	SNRNP200	100	90.122	ENSORLG00020004648	snrnp200	100	90.122	Oryzias_latipes_hni
ENSLAFG00000015626	SNRNP200	100	90.075	ENSORLG00015019114	snrnp200	100	90.082	Oryzias_latipes_hsok
ENSLAFG00000015626	SNRNP200	99	90.324	ENSOMEG00000011834	snrnp200	99	90.215	Oryzias_melastigma
ENSLAFG00000015626	SNRNP200	100	99.485	ENSOGAG00000006879	SNRNP200	100	99.485	Otolemur_garnettii
ENSLAFG00000015626	SNRNP200	100	98.222	ENSOARG00000013949	SNRNP200	100	98.222	Ovis_aries
ENSLAFG00000015626	SNRNP200	100	99.485	ENSPPAG00000041559	SNRNP200	100	99.485	Pan_paniscus
ENSLAFG00000015626	SNRNP200	100	99.579	ENSPPRG00000004435	SNRNP200	100	99.579	Panthera_pardus
ENSLAFG00000015626	SNRNP200	100	99.110	ENSPTIG00000006380	SNRNP200	100	99.110	Panthera_tigris_altaica
ENSLAFG00000015626	SNRNP200	100	99.485	ENSPTRG00000012230	SNRNP200	100	99.485	Pan_troglodytes
ENSLAFG00000015626	SNRNP200	100	99.438	ENSPANG00000006017	SNRNP200	100	99.438	Papio_anubis
ENSLAFG00000015626	SNRNP200	100	91.011	ENSPKIG00000014762	snrnp200	99	91.011	Paramormyrops_kingsleyae
ENSLAFG00000015626	SNRNP200	100	96.490	ENSPSIG00000008580	SNRNP200	100	96.490	Pelodiscus_sinensis
ENSLAFG00000015626	SNRNP200	100	98.736	ENSPCIG00000023050	SNRNP200	100	98.736	Phascolarctos_cinereus
ENSLAFG00000015626	SNRNP200	100	90.267	ENSPFOG00000015110	snrnp200	99	90.267	Poecilia_formosa
ENSLAFG00000015626	SNRNP200	97	89.945	ENSPLAG00000006711	snrnp200	99	89.945	Poecilia_latipinna
ENSLAFG00000015626	SNRNP200	97	89.890	ENSPMEG00000021166	snrnp200	99	89.890	Poecilia_mexicana
ENSLAFG00000015626	SNRNP200	100	90.356	ENSPREG00000008875	snrnp200	99	90.356	Poecilia_reticulata
ENSLAFG00000015626	SNRNP200	100	99.485	ENSPPYG00000012068	SNRNP200	100	99.485	Pongo_abelii
ENSLAFG00000015626	SNRNP200	97	98.718	ENSPCAG00000008536	SNRNP200	89	98.718	Procavia_capensis
ENSLAFG00000015626	SNRNP200	100	99.485	ENSPCOG00000024608	SNRNP200	100	99.485	Propithecus_coquereli
ENSLAFG00000015626	SNRNP200	96	100.000	ENSPVAG00000005860	SNRNP200	93	100.000	Pteropus_vampyrus
ENSLAFG00000015626	SNRNP200	99	85.902	ENSPNYG00000017476	snrnp200	99	85.808	Pundamilia_nyererei
ENSLAFG00000015626	SNRNP200	100	85.908	ENSPNAG00000010998	snrnp200	99	85.908	Pygocentrus_nattereri
ENSLAFG00000015626	SNRNP200	100	99.391	ENSRNOG00000012157	Snrnp200	100	99.391	Rattus_norvegicus
ENSLAFG00000015626	SNRNP200	100	99.485	ENSRBIG00000044690	-	100	99.485	Rhinopithecus_bieti
ENSLAFG00000015626	SNRNP200	100	99.485	ENSRROG00000037952	-	100	99.485	Rhinopithecus_roxellana
ENSLAFG00000015626	SNRNP200	100	99.438	ENSSBOG00000035471	SNRNP200	100	99.438	Saimiri_boliviensis_boliviensis
ENSLAFG00000015626	SNRNP200	97	98.645	ENSSHAG00000000758	SNRNP200	100	98.645	Sarcophilus_harrisii
ENSLAFG00000015626	SNRNP200	99	91.498	ENSSFOG00015018826	snrnp200	99	91.386	Scleropages_formosus
ENSLAFG00000015626	SNRNP200	99	90.371	ENSSMAG00000005463	snrnp200	99	90.262	Scophthalmus_maximus
ENSLAFG00000015626	SNRNP200	99	90.653	ENSSDUG00000021410	snrnp200	99	90.543	Seriola_dumerili
ENSLAFG00000015626	SNRNP200	99	90.606	ENSSLDG00000010884	snrnp200	99	90.496	Seriola_lalandi_dorsalis
ENSLAFG00000015626	SNRNP200	95	98.660	ENSSARG00000010728	SNRNP200	96	98.660	Sorex_araneus
ENSLAFG00000015626	SNRNP200	100	97.285	ENSSPUG00000003726	-	100	97.285	Sphenodon_punctatus
ENSLAFG00000015626	SNRNP200	99	90.700	ENSSPAG00000001842	snrnp200	99	90.590	Stegastes_partitus
ENSLAFG00000015626	SNRNP200	100	99.391	ENSSSCG00000008127	SNRNP200	100	99.391	Sus_scrofa
ENSLAFG00000015626	SNRNP200	99	87.669	ENSTGUG00000014475	-	100	87.669	Taeniopygia_guttata
ENSLAFG00000015626	SNRNP200	99	90.324	ENSTRUG00000001307	snrnp200	99	90.215	Takifugu_rubripes
ENSLAFG00000015626	SNRNP200	100	85.590	ENSTNIG00000004320	snrnp200	100	85.590	Tetraodon_nigroviridis
ENSLAFG00000015626	SNRNP200	82	98.485	ENSTBEG00000003329	-	67	98.485	Tupaia_belangeri
ENSLAFG00000015626	SNRNP200	100	99.204	ENSTTRG00000004983	SNRNP200	100	99.204	Tursiops_truncatus
ENSLAFG00000015626	SNRNP200	75	92.539	ENSUAMG00000008395	-	95	92.539	Ursus_americanus
ENSLAFG00000015626	SNRNP200	100	99.579	ENSUMAG00000012385	SNRNP200	100	99.579	Ursus_maritimus
ENSLAFG00000015626	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSLAFG00000015626	SNRNP200	100	99.346	ENSVVUG00000026247	SNRNP200	100	99.346	Vulpes_vulpes
ENSLAFG00000015626	SNRNP200	100	94.250	ENSXETG00000001243	snrnp200	100	94.250	Xenopus_tropicalis
ENSLAFG00000015626	SNRNP200	97	90.203	ENSXMAG00000002058	snrnp200	98	90.203	Xiphophorus_maculatus